RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 OR9A4Q8NGU2 314 aa20.7■□□□□ 0.9
SCN1B-206ENST00000638536 ZCCHC10Q8TBK6 192 aa20.7■□□□□ 0.9
SCN1B-206ENST00000638536 MESP1Q9BRJ9 268 aa20.7■□□□□ 0.9
SCN1B-206ENST00000638536 CNOT10Q9H9A5 744 aaKnown RBP20.7■□□□□ 0.9
SCN1B-206ENST00000638536 FETUBQ9UGM5 382 aa20.7■□□□□ 0.9
SCN1B-206ENST00000638536 DOCK10Q96BY6 2186 aa20.69■□□□□ 0.9
SCN1B-206ENST00000638536 KLK8O60259 260 aa20.69■□□□□ 0.9
SCN1B-206ENST00000638536 IPO13O94829 963 aaKnown RBP20.69■□□□□ 0.9
SCN1B-206ENST00000638536 B3GALT4O96024 378 aa20.69■□□□□ 0.9
SCN1B-206ENST00000638536 S100BP04271 92 aaPredicted RBP20.69■□□□□ 0.9
SCN1B-206ENST00000638536 SBK3P0C264 359 aa20.69■□□□□ 0.9
SCN1B-206ENST00000638536 IL1RNP18510 177 aa20.69■□□□□ 0.9
SCN1B-206ENST00000638536 SLCO1A2P46721 670 aa20.69■□□□□ 0.9
SCN1B-206ENST00000638536 RBBP5Q15291 538 aaKnown RBP20.69■□□□□ 0.9
SCN1B-206ENST00000638536 VWA2Q5GFL6 755 aa20.69■□□□□ 0.9
SCN1B-206ENST00000638536 ATG9BQ674R7 924 aa20.69■□□□□ 0.9
SCN1B-206ENST00000638536 PRMT9Q6P2P2 845 aa20.69■□□□□ 0.9
SCN1B-206ENST00000638536 CYP4X1Q8N118 509 aa20.69■□□□□ 0.9
SCN1B-206ENST00000638536 TMEM151AQ8N4L1 468 aa20.69■□□□□ 0.9
SCN1B-206ENST00000638536 CAMKVQ8NCB2 501 aa20.69■□□□□ 0.9
SCN1B-206ENST00000638536 OR2Y1Q8NGV0 311 aa20.69■□□□□ 0.9
SCN1B-206ENST00000638536 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.69■□□□□ 0.93e-6■■■■■ 50.8
SCN1B-206ENST00000638536 MMABQ96EY8 250 aaPredicted RBP20.69■□□□□ 0.9
SCN1B-206ENST00000638536 CATSPER2Q96P56 530 aa20.69■□□□□ 0.9
SCN1B-206ENST00000638536 C17orf62Q9BQA9 187 aa20.69■□□□□ 0.9
SCN1B-206ENST00000638536 AIF1LQ9BQI0 150 aa20.69■□□□□ 0.9
SCN1B-206ENST00000638536 AICDAQ9GZX7 198 aa20.69■□□□□ 0.9
SCN1B-206ENST00000638536 DRC3Q9H069 523 aa20.69■□□□□ 0.9
SCN1B-206ENST00000638536 SLC26A1Q9H2B4 701 aa20.69■□□□□ 0.9
SCN1B-206ENST00000638536 SOX17Q9H6I2 414 aaPredicted RBP20.69■□□□□ 0.9
SCN1B-206ENST00000638536 PSMC3IPQ9P2W1 217 aaPredicted RBP20.69■□□□□ 0.9
SCN1B-206ENST00000638536 POLHQ9Y253 713 aa20.69■□□□□ 0.9
SCN1B-206ENST00000638536 TNRC6AQ8NDV7 1962 aaKnown RBP20.69■□□□□ 0.9
SCN1B-206ENST00000638536 GOLGA8RI6L899 631 aa20.68■□□□□ 0.9
SCN1B-206ENST00000638536 TK2O00142 265 aa20.68■□□□□ 0.9
SCN1B-206ENST00000638536 TXNDC9O14530 226 aa20.68■□□□□ 0.9
SCN1B-206ENST00000638536 NDUFS4O43181 175 aa20.68■□□□□ 0.9
SCN1B-206ENST00000638536 SERPIND1P05546 499 aa20.68■□□□□ 0.9
SCN1B-206ENST00000638536 OTX2P32243 289 aa20.68■□□□□ 0.9
SCN1B-206ENST00000638536 HYAL2Q12891 473 aa20.68■□□□□ 0.9
SCN1B-206ENST00000638536 CHAF1BQ13112 559 aa20.68■□□□□ 0.9
SCN1B-206ENST00000638536 FAM53BQ14153 422 aa20.68■□□□□ 0.9
SCN1B-206ENST00000638536 SLBPQ14493 270 aaKnown RBP eCLIP20.68■□□□□ 0.9
SCN1B-206ENST00000638536 PDK4Q16654 411 aa20.68■□□□□ 0.9
SCN1B-206ENST00000638536 CPZQ66K79 652 aa20.68■□□□□ 0.9
SCN1B-206ENST00000638536 WDR93Q6P2C0 686 aa20.68■□□□□ 0.9
SCN1B-206ENST00000638536 KLC3Q6P597 504 aa20.68■□□□□ 0.9
SCN1B-206ENST00000638536 PDSS2Q86YH6 399 aa20.68■□□□□ 0.9
SCN1B-206ENST00000638536 PRSS58Q8IYP2 241 aa20.68■□□□□ 0.9
SCN1B-206ENST00000638536 AENQ8WTP8 325 aaKnown RBP20.68■□□□□ 0.9
SCN1B-206ENST00000638536 UBTD2Q8WUN7 234 aa20.68■□□□□ 0.9
SCN1B-206ENST00000638536 SLC39A7Q92504 469 aa20.68■□□□□ 0.9
SCN1B-206ENST00000638536 FKBP10Q96AY3 582 aa20.68■□□□□ 0.9
SCN1B-206ENST00000638536 FAM117AQ9C073 453 aa20.68■□□□□ 0.9
SCN1B-206ENST00000638536 GPRC5BQ9NZH0 403 aa20.68■□□□□ 0.9
SCN1B-206ENST00000638536 CPSF2Q9P2I0 782 aaKnown RBP20.68■□□□□ 0.9
SCN1B-206ENST00000638536 XPR1Q9UBH6 696 aa20.68■□□□□ 0.9
SCN1B-206ENST00000638536 ZFP69BQ9UJL9 534 aa20.68■□□□□ 0.9
SCN1B-206ENST00000638536 A0A1W2PPM1 405 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 VSTM2BA6NLU5 285 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 SYCE1LA8MT33 242 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 MASP2O00187 686 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 DNAJB6O75190 326 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 DNAJB5O75953 348 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 SIX3O95343 332 aaPredicted RBP20.67■□□□□ 0.9
SCN1B-206ENST00000638536 ALBP02768 609 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 FBLP22087 321 aaKnown RBP20.67■□□□□ 0.9
SCN1B-206ENST00000638536 FOLR3P41439 243 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 DOC2AQ14183 400 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 SETDB1Q15047 1291 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 LGSNQ5TDP6 509 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 NUP210LQ5VU65 1888 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 LAPTM4BQ86VI4 370 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 OR2W6PQ8NHA6 318 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 STT3BQ8TCJ2 826 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 EPS8L3Q8TE67 593 aaKnown RBP20.67■□□□□ 0.9
SCN1B-206ENST00000638536 CREB3L4Q8TEY5 395 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 SCYL1Q96KG9 808 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 TRIM55Q9BYV6 548 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 KLHL31Q9H511 634 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 ZNF490Q9ULM2 529 aaPredicted RBP20.67■□□□□ 0.9
SCN1B-206ENST00000638536 PADI2Q9Y2J8 665 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 SMIM23A6NLE4 172 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 C4orf51C9J302 202 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 TBX6O95947 436 aaPredicted RBP20.67■□□□□ 0.9
SCN1B-206ENST00000638536 PIM1P11309 404 aaPredicted RBP20.67■□□□□ 0.9
SCN1B-206ENST00000638536 COL6A2P12110 1019 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 GFAPP14136 432 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 EFNA3P52797 238 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 POLE2P56282 527 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 DSG2Q14126 1118 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 XKR6Q5GH73 641 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 LRRC70Q7Z2Q7 622 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.67■□□□□ 0.9
SCN1B-206ENST00000638536 MTBPQ96DY7 904 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 MVB12AQ96EY5 273 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 ARHGAP9Q9BRR9 750 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 PARD6BQ9BYG5 372 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 MAN2B2Q9Y2E5 1009 aa20.67■□□□□ 0.9
SCN1B-206ENST00000638536 IGLV3-12A0A075B6K2 115 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms