RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	B4GALT3	O60512	393 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	HCN1	O60741	890 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	WDR47	O94967	919 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	ECD	O95905	644 aa	Predicted RBP	10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	CLEC2L	P0C7M8	214 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	HAPLN1	P10915	354 aa	Predicted RBP	10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	SLC2A4	P14672	509 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	PRKAR1B	P31321	381 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	GRK5	P34947	590 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	AVPR1A	P37288	418 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	CLDN20	P56880	219 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	YBEY	P58557	167 aa	Predicted RBP	10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	SST	P61278	116 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	YBX1	P67809	324 aa	Known RBP	10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	POU4F1	Q01851	419 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	ZNF79	Q15937	498 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	DUSP6	Q16828	381 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	TATDN3	Q17R31	274 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	FUT11	Q495W5	492 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	PAGE3	Q5JUK9	113 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	PRSS36	Q5K4E3	855 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	C6orf132	Q5T0Z8	1188 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	LCN1P1	Q5VSP4	162 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	PKN3	Q6P5Z2	889 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	GDPGP1	Q6ZNW5	385 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	ZNF367	Q7RTV3	350 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	P3H2	Q8IVL5	708 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	TP53INP2	Q8IXH6	220 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	TIGD4	Q8IY51	512 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	CYP4Z2P	Q8N1L4	340 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	CDYL2	Q8N8U2	506 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	NETO2	Q8NC67	525 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	DBF4B	Q8NFT6	615 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	FOXJ1	Q92949	421 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	RADIL	Q96JH8	1075 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	CASD1	Q96PB1	797 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	TTPAL	Q9BTX7	342 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	FICD	Q9BVA6	458 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	SLC39A8	Q9C0K1	460 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	PITHD1	Q9GZP4	211 aa	Predicted RBP	10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	SLC25A51	Q9H1U9	297 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	OR51E2	Q9H255	320 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	PRDM5	Q9NQX1	630 aa	Predicted RBP	10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	AIG1	Q9NVV5	245 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	RBM22	Q9NW64	420 aa	Known RBP eCLIP	10.42	□□□□□ -0.74	3e-11	■■■■■ 36.9
CHD2-223	ENST00000636306	SAGE1	Q9NXZ1	904 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	ZIM2	Q9NZV7	527 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	MBD2	Q9UBB5	411 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	SCML1	Q9UN30	329 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	LIPT1	Q9Y234	373 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	MRPS7	Q9Y2R9	242 aa	Known RBP	10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	MIA3	Q5JRA6	1907 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	GREB1	Q4ZG55	1949 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	IGLV3-10	A0A075B6K4	115 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	LOC100506127	A0A0U1RQW1	187 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	hCG_1807616	A0A1W2PRN6	198 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	PQLC2L	A1A4F0	135 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	EFCAB10	A6NFE3	127 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306		E9PQ18	207 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	ARNTL	O00327	626 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	GSTA4	O15217	222 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	ORC5	O43913	435 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	C1R	P00736	705 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	CYBB	P04839	570 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	CDK1	P06493	297 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	SAT1	P21673	171 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	NUP62	P37198	522 aa	Predicted RBP	10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	MAP2K3	P46734	347 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	SLC11A1	P49279	550 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	RGS6	P49758	472 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	MAP2K6	P52564	334 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	PSPH	P78330	225 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	EFEMP1	Q12805	493 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	ZNF169	Q14929	603 aa	Predicted RBP	10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	POU4F3	Q15319	338 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	TAF12	Q16514	161 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	GLYR1	Q49A26	553 aa	Predicted RBP	10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	C10orf120	Q5SQS8	335 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	KIAA0930	Q6ICG6	404 aa	Predicted RBP	10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	CCDC149	Q6ZUS6	474 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	AHSA2	Q719I0	299 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	FAM124A	Q86V42	546 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	IPMK	Q8NFU5	416 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	OR8J3	Q8NGG0	315 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	ZNF675	Q8TD23	568 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	ZNF431	Q8TF32	576 aa	Predicted RBP	10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	TRMT61A	Q96FX7	289 aa	Known RBP	10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	TMEM74	Q96NL1	305 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	SEPT5	Q99719	369 aa	Predicted RBP	10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	KCNS3	Q9BQ31	491 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	COPS4	Q9BT78	406 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	TNKS2	Q9H2K2	1166 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	PIGU	Q9H490	435 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	RIBC2	Q9H4K1	309 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	HEXA-AS1	Q9H8Q6	139 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	EMC7	Q9NPA0	242 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	CD93	Q9NPY3	652 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	SLC35C2	Q9NQQ7	365 aa		10.41	□□□□□ -0.74
CHD2-223	ENST00000636306	PIH1D1	Q9NWS0	290 aa	Known RBP	10.41	□□□□□ -0.74

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