RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 WDR53Q7Z5U6 358 aaPredicted RBP16.97■□□□□ 0.31
CLN6-212ENST00000636020 CCDC50Q8IVM0 306 aa16.97■□□□□ 0.31
CLN6-212ENST00000636020 PPP1R2P1Q96PQ5 205 aa16.97■□□□□ 0.31
CLN6-212ENST00000636020 TTC1Q99614 292 aa16.97■□□□□ 0.31
CLN6-212ENST00000636020 SCN3AQ9NY46 2000 aa16.96■□□□□ 0.31
CLN6-212ENST00000636020 H7C1Q1 480 aa16.96■□□□□ 0.31
CLN6-212ENST00000636020 BCKDKO14874 412 aa16.96■□□□□ 0.31
CLN6-212ENST00000636020 ERGP11308 486 aa16.96■□□□□ 0.31
CLN6-212ENST00000636020 OR4D2P58180 307 aa16.96■□□□□ 0.31
CLN6-212ENST00000636020 GPR85P60893 370 aa16.96■□□□□ 0.31
CLN6-212ENST00000636020 MPP1Q00013 466 aa16.96■□□□□ 0.31
CLN6-212ENST00000636020 PRDX1Q06830 199 aaKnown RBP16.96■□□□□ 0.31
CLN6-212ENST00000636020 TMED2Q15363 201 aa16.96■□□□□ 0.31
CLN6-212ENST00000636020 KCTD11Q693B1 232 aa16.96■□□□□ 0.31
CLN6-212ENST00000636020 ARMC10Q8N2F6 343 aa16.96■□□□□ 0.31
CLN6-212ENST00000636020 SIMC1Q8NDZ2 872 aa16.96■□□□□ 0.31
CLN6-212ENST00000636020 MAGEC3Q8TD91 643 aa16.96■□□□□ 0.31
CLN6-212ENST00000636020 MCOLN3Q8TDD5 553 aa16.96■□□□□ 0.31
CLN6-212ENST00000636020 CREB3L4Q8TEY5 395 aa16.96■□□□□ 0.31
CLN6-212ENST00000636020 TSLPQ969D9 159 aa16.96■□□□□ 0.31
CLN6-212ENST00000636020 LRRC45Q96CN5 670 aa16.96■□□□□ 0.31
CLN6-212ENST00000636020 FERMT1Q9BQL6 677 aa16.96■□□□□ 0.31
CLN6-212ENST00000636020 UTP6Q9NYH9 597 aaKnown RBP16.96■□□□□ 0.31
CLN6-212ENST00000636020 CAPN11Q9UMQ6 739 aa16.96■□□□□ 0.31
CLN6-212ENST00000636020 ARID1AO14497 2285 aa16.95■□□□□ 0.3
CLN6-212ENST00000636020 FEZF1A0PJY2 475 aa16.95■□□□□ 0.3
CLN6-212ENST00000636020 OR14I1A6ND48 311 aa16.95■□□□□ 0.3
CLN6-212ENST00000636020 MAGEB17A8MXT2 336 aa16.95■□□□□ 0.3
CLN6-212ENST00000636020 SGK494L7N484 410 aa16.95■□□□□ 0.3
CLN6-212ENST00000636020 STATHP02808 62 aa16.95■□□□□ 0.3
CLN6-212ENST00000636020 COMTP21964 271 aa16.95■□□□□ 0.3
CLN6-212ENST00000636020 RPA3P35244 121 aaPredicted RBP16.95■□□□□ 0.3
CLN6-212ENST00000636020 PPIAP62937 165 aaKnown RBP16.95■□□□□ 0.3
CLN6-212ENST00000636020 PCBP2Q15366 365 aaKnown RBP eCLIP16.95■□□□□ 0.3
CLN6-212ENST00000636020 SLC18A3Q16572 532 aa16.95■□□□□ 0.3
CLN6-212ENST00000636020 FBXW10Q5XX13 1052 aa16.95■□□□□ 0.3
CLN6-212ENST00000636020 BBS12Q6ZW61 710 aa16.95■□□□□ 0.3
CLN6-212ENST00000636020 MDGA2Q7Z553 956 aa16.95■□□□□ 0.3
CLN6-212ENST00000636020 PLD3Q8IV08 490 aa16.95■□□□□ 0.3
CLN6-212ENST00000636020 GSDMBQ8TAX9 411 aa16.95■□□□□ 0.3
CLN6-212ENST00000636020 SMPDL3AQ92484 453 aa16.95■□□□□ 0.3
CLN6-212ENST00000636020 ZDHHC11Q9H8X9 412 aa16.95■□□□□ 0.3
CLN6-212ENST00000636020 LANCL2Q9NS86 450 aa16.95■□□□□ 0.3
CLN6-212ENST00000636020 PIH1D1Q9NWS0 290 aaKnown RBP16.95■□□□□ 0.3
CLN6-212ENST00000636020 APOC4-APOC2K7ER74 178 aa16.94■□□□□ 0.3
CLN6-212ENST00000636020 FCHO1O14526 889 aa16.94■□□□□ 0.3
CLN6-212ENST00000636020 HAT1O14929 419 aa16.94■□□□□ 0.3
CLN6-212ENST00000636020 ARHGEF9O43307 516 aa16.94■□□□□ 0.3
CLN6-212ENST00000636020 GOT2P00505 430 aaKnown RBP16.94■□□□□ 0.3
CLN6-212ENST00000636020 APOC2P02655 101 aa16.94■□□□□ 0.3
CLN6-212ENST00000636020 IL1RNP18510 177 aa16.94■□□□□ 0.3
CLN6-212ENST00000636020 ICE2Q659A1 982 aa16.94■□□□□ 0.3
CLN6-212ENST00000636020 CXorf67Q86X51 503 aaPredicted RBP16.94■□□□□ 0.3
CLN6-212ENST00000636020 CYP4Z2PQ8N1L4 340 aa16.94■□□□□ 0.3
CLN6-212ENST00000636020 OR13J1Q8NGT2 312 aa16.94■□□□□ 0.3
CLN6-212ENST00000636020 SKA2Q8WVK7 121 aaPredicted RBP16.94■□□□□ 0.3
CLN6-212ENST00000636020 SLCO2A1Q92959 643 aa16.94■□□□□ 0.3
CLN6-212ENST00000636020 SMC6Q96SB8 1091 aa16.94■□□□□ 0.3
CLN6-212ENST00000636020 DEPPQ9NTK1 212 aa16.94■□□□□ 0.3
CLN6-212ENST00000636020 B4GALT7Q9UBV7 327 aa16.94■□□□□ 0.3
CLN6-212ENST00000636020 TAC3Q9UHF0 121 aa16.94■□□□□ 0.3
CLN6-212ENST00000636020 R3HDM2Q9Y2K5 976 aaKnown RBP16.94■□□□□ 0.3
CLN6-212ENST00000636020 PSTPIP1O43586 416 aa16.93■□□□□ 0.3
CLN6-212ENST00000636020 SPOPO43791 374 aa16.93■□□□□ 0.3
CLN6-212ENST00000636020 CDC123O75794 336 aaPredicted RBP16.93■□□□□ 0.3
CLN6-212ENST00000636020 STK10O94804 968 aaKnown RBP16.93■□□□□ 0.3
CLN6-212ENST00000636020 SEMA3AQ14563 771 aa16.93■□□□□ 0.3
CLN6-212ENST00000636020 CCDC38Q502W7 563 aa16.93■□□□□ 0.3
CLN6-212ENST00000636020 RIPPLY2Q5TAB7 128 aa16.93■□□□□ 0.3
CLN6-212ENST00000636020 ZNF534Q76KX8 674 aa16.93■□□□□ 0.3
CLN6-212ENST00000636020 OR9A1PQ8NGU1 263 aa16.93■□□□□ 0.3
CLN6-212ENST00000636020 FOPNLQ96NB1 174 aa16.93■□□□□ 0.3
CLN6-212ENST00000636020 SH3GL2Q99962 352 aa16.93■□□□□ 0.3
CLN6-212ENST00000636020 HEMGNQ9BXL5 484 aa16.93■□□□□ 0.3
CLN6-212ENST00000636020 DUSP10Q9Y6W6 482 aa16.93■□□□□ 0.3
CLN6-212ENST00000636020 A0A1B0GVC2 190 aa16.92■□□□□ 0.3
CLN6-212ENST00000636020 PINLYPA6NC86 204 aa16.92■□□□□ 0.3
CLN6-212ENST00000636020 WDR1O75083 606 aa16.92■□□□□ 0.3
CLN6-212ENST00000636020 IGHG3P01860 377 aa16.92■□□□□ 0.3
CLN6-212ENST00000636020 EPXP11678 715 aa16.92■□□□□ 0.3
CLN6-212ENST00000636020 TACR1P25103 407 aa16.92■□□□□ 0.3
CLN6-212ENST00000636020 ASTE1Q2TB18 679 aaPredicted RBP16.92■□□□□ 0.3
CLN6-212ENST00000636020 Q5PR19 223 aa16.92■□□□□ 0.3
CLN6-212ENST00000636020 C1orf185Q5T7R7 199 aa16.92■□□□□ 0.3
CLN6-212ENST00000636020 TMEM214Q6NUQ4 689 aaKnown RBP16.92■□□□□ 0.3
CLN6-212ENST00000636020 AFTPHQ6ULP2 937 aa16.92■□□□□ 0.3
CLN6-212ENST00000636020 VN1R4Q7Z5H5 301 aa16.92■□□□□ 0.3
CLN6-212ENST00000636020 CDKL3Q8IVW4 592 aaPredicted RBP16.92■□□□□ 0.3
CLN6-212ENST00000636020 RHOT2Q8IXI1 618 aa16.92■□□□□ 0.3
CLN6-212ENST00000636020 PHC2Q8IXK0 858 aa16.92■□□□□ 0.3
CLN6-212ENST00000636020 RCOR2Q8IZ40 523 aa16.92■□□□□ 0.3
CLN6-212ENST00000636020 OR4L1Q8NH43 312 aa16.92■□□□□ 0.3
CLN6-212ENST00000636020 RNASE6Q93091 150 aaKnown RBP16.92■□□□□ 0.3
CLN6-212ENST00000636020 GBP4Q96PP9 640 aa16.92■□□□□ 0.3
CLN6-212ENST00000636020 MACROD1Q9BQ69 325 aa16.92■□□□□ 0.3
CLN6-212ENST00000636020 RBCK1Q9BYM8 510 aa16.92■□□□□ 0.3
CLN6-212ENST00000636020 ATG10Q9H0Y0 220 aa16.92■□□□□ 0.3
CLN6-212ENST00000636020 SLC2A6Q9UGQ3 507 aa16.92■□□□□ 0.3
CLN6-212ENST00000636020 FAM166BA8MTA8 275 aa16.91■□□□□ 0.3
CLN6-212ENST00000636020 RNF212BA8MTL3 300 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms