RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	KLKB1	P03952	638 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	MYBPC3	Q14896	1274 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	ASTL	Q6HA08	431 aa	Predicted RBP	13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	AAGAB	Q6PD74	315 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	RTL4	Q6ZR62	310 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	SLC9B2	Q86UD5	537 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	GPR65	Q8IYL9	337 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	EID2	Q8N6I1	236 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	UXS1	Q8NBZ7	420 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	PIK3C3	Q8NEB9	887 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	ZNF671	Q8TAW3	534 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	HM13	Q8TCT9	377 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	SLC5A11	Q8WWX8	675 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	CPEB1	Q9BZB8	566 aa	Known RBP	13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	PLGRKT	Q9HBL7	147 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	HEBP2	Q9Y5Z4	205 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	USP3	Q9Y6I4	520 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	ZCWPW2	A0A1B0GU75	182 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	MATN2	O00339	956 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	GFRA3	O60609	400 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	TRMU	O75648	421 aa	Known RBP	13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	LDOC1	O95751	146 aa	Predicted RBP	13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	PGR	P06401	933 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	ENG	P17813	658 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	CD38	P28907	300 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	HLA-F	P30511	346 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	SNAPC1	Q16533	368 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	HMGN2P46	Q86SG4	172 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	SCAI	Q8N9R8	606 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	RAB8B	Q92930	207 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	MR1	Q95460	341 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	LRRC58	Q96CX6	371 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	CGREF1	Q99674	301 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	CD244	Q9BZW8	370 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	TMEM27	Q9HBJ8	222 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	SLC6A14	Q9UN76	642 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	ERGIC3	Q9Y282	383 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	MYH7B	A7E2Y1	1941 aa		13.86	□□□□□ -0.19
NEDD4L-238	ENST00000635997	TMEM150C	B9EJG8	249 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	OAS1	P00973	400 aa	Known RBP	13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	SRPRA	P08240	638 aa	Known RBP	13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	IGFBP5	P24593	272 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	VARS	P26640	1264 aa	Known RBP	13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	EGFLAM	Q63HQ2	1017 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	GPR153	Q6NV75	609 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	CROCCP3	Q8IVE0	287 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	GLB1L3	Q8NCI6	653 aa	Predicted RBP	13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	OR5M3	Q8NGP4	307 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	RGMA	Q96B86	450 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	PGAP3	Q96FM1	320 aa	Predicted RBP	13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	REXO4	Q9GZR2	422 aa	Known RBP	13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	PTGFRN	Q9P2B2	879 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	COL4A1	P02462	1669 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997		M0QX08	132 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	NDUFS1	P28331	727 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	MPI	P34949	423 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	LASP1	Q14847	261 aa	Known RBP	13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	ZNF544	Q6NX49	715 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	ZNF783	Q6ZMS7	281 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	IQCH	Q86VS3	1027 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	PPP1R14A	Q96A00	147 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	CHFR	Q96EP1	664 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	TEFM	Q96QE5	360 aa	Known RBP	13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	SLC35A5	Q9BS91	424 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	SLC17A9	Q9BYT1	436 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	TRNAU1AP	Q9NX07	287 aa	Known RBP	13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	FAM221B	A6H8Z2	402 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	GRXCR2	A6NFK2	248 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	FABP3	P05413	133 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	CLDN2	P57739	230 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	GRB7	Q14451	532 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	IER5L	Q5T953	404 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	PIH1D2	Q8WWB5	315 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	PKP4	Q99569	1192 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	KLF16	Q9BXK1	252 aa	Predicted RBP	13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	PRRG4	Q9BZD6	226 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	ZC4H2	Q9NQZ6	224 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	CAB39	Q9Y376	341 aa	Predicted RBP	13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	PCDHGB3	Q9Y5G1	929 aa		13.85	□□□□□ -0.19
NEDD4L-238	ENST00000635997	PRKD3	O94806	890 aa		13.84	□□□□□ -0.19
NEDD4L-238	ENST00000635997	CD1D	P15813	335 aa		13.84	□□□□□ -0.19
NEDD4L-238	ENST00000635997	HNRNPA2B1	P22626	353 aa	Known RBP	13.84	□□□□□ -0.19
NEDD4L-238	ENST00000635997	IGFALS	P35858	605 aa		13.84	□□□□□ -0.19
NEDD4L-238	ENST00000635997	LAPTM4A	Q15012	233 aa		13.84	□□□□□ -0.19
NEDD4L-238	ENST00000635997	DCST1	Q5T197	706 aa		13.84	□□□□□ -0.19
NEDD4L-238	ENST00000635997	ERICH5	Q6P6B1	374 aa		13.84	□□□□□ -0.19
NEDD4L-238	ENST00000635997	TIFAB	Q6ZNK6	161 aa		13.84	□□□□□ -0.19
NEDD4L-238	ENST00000635997	ADCY4	Q8NFM4	1077 aa		13.84	□□□□□ -0.19
NEDD4L-238	ENST00000635997	MRPL48	Q96GC5	212 aa	Known RBP	13.84	□□□□□ -0.19
NEDD4L-238	ENST00000635997	OR2M4	Q96R27	311 aa		13.84	□□□□□ -0.19
NEDD4L-238	ENST00000635997	HDHD2	Q9H0R4	259 aa		13.84	□□□□□ -0.19
NEDD4L-238	ENST00000635997	UTS2R	Q9UKP6	389 aa		13.84	□□□□□ -0.19
NEDD4L-238	ENST00000635997	ERVK-11	Q9UQG0	969 aa		13.84	□□□□□ -0.19
NEDD4L-238	ENST00000635997	NUP205	Q92621	2012 aa		13.84	□□□□□ -0.19
NEDD4L-238	ENST00000635997	ALOX12	P18054	663 aa		13.84	□□□□□ -0.19
NEDD4L-238	ENST00000635997	AHCY	P23526	432 aa		13.84	□□□□□ -0.19
NEDD4L-238	ENST00000635997	ACRV1	P26436	265 aa		13.84	□□□□□ -0.19
NEDD4L-238	ENST00000635997	MLLT3	P42568	568 aa	Predicted RBP	13.84	□□□□□ -0.19
NEDD4L-238	ENST00000635997	DEFB134	Q4QY38	66 aa		13.84	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms