RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 CEP68Q76N32 757 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 PAGE2Q7Z2X7 111 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 OOSP2Q86WS3 158 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 SYT12Q8IV01 421 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 SCUBE1Q8IWY4 988 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 DEFB107AQ8IZN7 70 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 METTL4Q8N3J2 472 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 RNF175Q8N4F7 328 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 C1orf52Q8N6N3 182 aaKnown RBP7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 TMEM105Q8N8V8 129 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 ZNF740Q8NDX6 193 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 TRPV3Q8NET8 790 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 DNAJB8Q8NHS0 232 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 FBXO27Q8NI29 283 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 PATE1Q8WXA2 126 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 UTP4Q969X6 686 aaKnown RBP7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 TESCQ96BS2 214 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 THAP11Q96EK4 314 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 C11orf24Q96F05 449 aaPredicted RBP7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 ZC3H10Q96K80 434 aaKnown RBP7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 QRFPRQ96P65 431 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 OR2A14Q96R47 310 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 NPAS2Q99743 824 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 DPH7Q9BTV6 452 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 THTPAQ9BU02 230 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 SPNS1Q9H2V7 528 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 CLMPQ9H6B4 373 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 WDR41Q9HAD4 459 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 SLC6A20Q9NP91 592 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 PILRBQ9UKJ0 227 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 DLGAP4Q9Y2H0 992 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 KLK4Q9Y5K2 254 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 AP1M2Q9Y6Q5 423 aa7.23□□□□□ -1.25
PTP4A1-206ENST00000627002 NUMA1Q14980 2115 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 A0A0J9YY10 115 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 GNG14A0A1W2PPG7 69 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 FEZF1A0PJY2 475 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 GSAPA4D1B5 854 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 OR5K3A6NET4 321 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 HAT1O14929 419 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 YKT6O15498 198 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 PCDH7O60245 1069 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 CIB2O75838 187 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 ETHE1O95571 254 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 TGFB1P01137 390 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 ANXA4P09525 319 aaPredicted RBP7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 CD1EP15812 388 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 CAPN3P20807 821 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 IL12AP29459 219 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 TIA1P31483 386 aaKnown RBP eCLIP7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 HPCAL1P37235 193 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 RPL3P39023 403 aaKnown RBP7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 GRIA3P42263 894 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 ZFP36L2P47974 494 aaKnown RBP7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 ARFIP1P53367 373 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 EPHA4P54764 986 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 MAZP56270 477 aaKnown RBP7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 ELF3P78545 371 aaPredicted RBP7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 ZNF763Q0D2J5 394 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 PTGR1Q14914 329 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 C14orf28Q4W4Y0 310 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 DEPDC1Q5TB30 811 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 KHDRBS2Q5VWX1 349 aaKnown RBP7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 PEAR1Q5VY43 1037 aaPredicted RBP7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 KIAA1614Q5VZ46 1190 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 ADNP2Q6IQ32 1131 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 SPESP1Q6UW49 350 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 BNC2Q6ZN30 1099 aaPredicted RBP7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 PRR23BQ6ZRT6 265 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 MSANTD1Q6ZTZ1 278 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 COMMD6Q7Z4G1 85 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 VN1R5Q7Z5H4 357 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 PAQR7Q86WK9 346 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 C17orf82Q86X59 251 aaPredicted RBP7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 ULK2Q8IYT8 1036 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 ARL14Q8N4G2 192 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 DPP10Q8N608 796 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 ANKRD53Q8N9V6 530 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 MFSD9Q8NBP5 474 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 SRFBP1Q8NEF9 429 aaKnown RBP7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 OR10G6Q8NH81 332 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 FLVCR1-AS1Q8TAF5 88 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 CEP76Q8TAP6 659 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 NELL1Q92832 810 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 ZUFSPQ96AP4 578 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 RGMAQ96B86 450 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 TEX37Q96LM6 180 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 TSSK3Q96PN8 268 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 ELF4Q99607 663 aaPredicted RBP7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 PRPF18Q99633 342 aaKnown RBP7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 HOPXQ9BPY8 73 aaPredicted RBP7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 MS4A8Q9BY19 250 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 OR51B5Q9H339 312 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 ACTL8Q9H568 366 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 RMND5AQ9H871 391 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 SLC52A3Q9NQ40 469 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 HRASLS2Q9NWW9 162 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 ZSCAN32Q9NX65 697 aa7.22□□□□□ -1.25
PTP4A1-206ENST00000627002 MCM8Q9UJA3 840 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms