RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 SYNDIG1Q9H7V2 258 aa17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 MN1Q10571 1320 aaPredicted RBP17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 A0A0J9YVX5 310 aa17.05■□□□□ 0.32
PTCHD3-202ENST00000622555 LSM1O15116 133 aaKnown RBP17.05■□□□□ 0.32
PTCHD3-202ENST00000622555 CTSVO60911 334 aa17.05■□□□□ 0.32
PTCHD3-202ENST00000622555 DNAJC8O75937 253 aaPredicted RBP17.05■□□□□ 0.32
PTCHD3-202ENST00000622555 SERPIND1P05546 499 aa17.05■□□□□ 0.32
PTCHD3-202ENST00000622555 LBPP18428 481 aa17.05■□□□□ 0.32
PTCHD3-202ENST00000622555 SNAP47Q5SQN1 464 aa17.05■□□□□ 0.32
PTCHD3-202ENST00000622555 CACHD1Q5VU97 1274 aa17.05■□□□□ 0.32
PTCHD3-202ENST00000622555 PPP3R2Q96LZ3 170 aa17.05■□□□□ 0.32
PTCHD3-202ENST00000622555 FCRL4Q96PJ5 515 aa17.05■□□□□ 0.32
PTCHD3-202ENST00000622555 NUDT22Q9BRQ3 303 aa17.05■□□□□ 0.32
PTCHD3-202ENST00000622555 RASSF4Q9H2L5 321 aa17.05■□□□□ 0.32
PTCHD3-202ENST00000622555 LRRN3Q9H3W5 708 aa17.05■□□□□ 0.32
PTCHD3-202ENST00000622555 TMEM9Q9P0T7 183 aa17.05■□□□□ 0.32
PTCHD3-202ENST00000622555 ZFP69BQ9UJL9 534 aa17.05■□□□□ 0.32
PTCHD3-202ENST00000622555 ATXN7L1Q9ULK2 861 aaPredicted RBP17.05■□□□□ 0.32
PTCHD3-202ENST00000622555 G3BP2Q9UN86 482 aaKnown RBP17.05■□□□□ 0.32
PTCHD3-202ENST00000622555 HCN4Q9Y3Q4 1203 aa17.05■□□□□ 0.32
PTCHD3-202ENST00000622555 PCDHGA4Q9Y5G9 962 aa17.05■□□□□ 0.32
PTCHD3-202ENST00000622555 RSL1D1O76021 490 aaKnown RBP17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 TGFB1P01137 390 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 C9P02748 559 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 NCF2P19878 526 aaPredicted RBP17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 GSTM2P28161 218 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 AHRP35869 848 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 AP5B1Q2VPB7 878 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 TMEM198Q66K66 360 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 FBXO42Q6P3S6 717 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 ZFYVE21Q9BQ24 234 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 LRTM1Q9HBL6 345 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 VPS29Q9UBQ0 182 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 PILRAQ9UKJ1 303 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 TRIM33Q9UPN9 1127 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 AP1M2Q9Y6Q5 423 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 CAPN7Q9Y6W3 813 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 IGHV5-51A0A0C4DH38 117 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 A0A1W2PQM1 296 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 FOXD2O60548 495 aaPredicted RBP17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 SEC22BO75396 215 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 DCTN3O75935 186 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 UBOX5O94941 541 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 ETHE1O95571 254 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 CPNE6O95741 557 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 STATHP02808 62 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 PRR35P0CG20 571 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 RELAQ04206 551 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 BNIP1Q12981 228 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 SQSTM1Q13501 440 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 C6orf136Q5SQH8 315 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 RNF44Q7L0R7 432 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 MTDHQ86UE4 582 aaKnown RBP17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 FITM2Q8N6M3 262 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 FNDC5Q8NAU1 212 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 CMTM7Q96FZ5 175 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 TCTN2Q96GX1 697 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 MARK4Q96L34 752 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 SERPINI1Q99574 410 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 OR51B5Q9H339 312 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 SYNPO2LQ9H987 977 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 NMRK1Q9NWW6 199 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 C1orf109Q9NX04 203 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 SOHLH2Q9NX45 425 aa17.04■□□□□ 0.32
PTCHD3-202ENST00000622555 UBDO15205 165 aa17.03■□□□□ 0.32
PTCHD3-202ENST00000622555 GDF9O60383 454 aa17.03■□□□□ 0.32
PTCHD3-202ENST00000622555 CLEC3AO75596 197 aa17.03■□□□□ 0.32
PTCHD3-202ENST00000622555 ACP1P24666 158 aa17.03■□□□□ 0.32
PTCHD3-202ENST00000622555 PTX3P26022 381 aaPredicted RBP17.03■□□□□ 0.32
PTCHD3-202ENST00000622555 MLLT3P42568 568 aaPredicted RBP17.03■□□□□ 0.32
PTCHD3-202ENST00000622555 RPL38P63173 70 aaKnown RBP17.03■□□□□ 0.32
PTCHD3-202ENST00000622555 METTL21CQ5VZV1 264 aa17.03■□□□□ 0.32
PTCHD3-202ENST00000622555 TMEM71Q6P5X7 295 aa17.03■□□□□ 0.32
PTCHD3-202ENST00000622555 CARFQ8N187 725 aa17.03■□□□□ 0.32
PTCHD3-202ENST00000622555 TRPV3Q8NET8 790 aa17.03■□□□□ 0.32
PTCHD3-202ENST00000622555 CREB3L4Q8TEY5 395 aa17.03■□□□□ 0.32
PTCHD3-202ENST00000622555 THAP11Q96EK4 314 aa17.03■□□□□ 0.32
PTCHD3-202ENST00000622555 CATSPER2Q96P56 530 aa17.03■□□□□ 0.32
PTCHD3-202ENST00000622555 OR2A5Q96R48 311 aa17.03■□□□□ 0.32
PTCHD3-202ENST00000622555 C1orf50Q9BV19 199 aa17.03■□□□□ 0.32
PTCHD3-202ENST00000622555 MS4A8Q9BY19 250 aa17.03■□□□□ 0.32
PTCHD3-202ENST00000622555 FAM60AQ9NP50 221 aa17.03■□□□□ 0.32
PTCHD3-202ENST00000622555 PPT2Q9UMR5 302 aa17.03■□□□□ 0.32
PTCHD3-202ENST00000622555 A8MU76 341 aa17.02■□□□□ 0.32
PTCHD3-202ENST00000622555 PROB1E7EW31 1015 aa17.02■□□□□ 0.32
PTCHD3-202ENST00000622555 FCHO1O14526 889 aa17.02■□□□□ 0.32
PTCHD3-202ENST00000622555 NDUFS4O43181 175 aa17.02■□□□□ 0.32
PTCHD3-202ENST00000622555 MAP3K7O43318 606 aa17.02■□□□□ 0.32
PTCHD3-202ENST00000622555 ZBTB11O95625 1053 aaPredicted RBP17.02■□□□□ 0.32
PTCHD3-202ENST00000622555 PRPH2P23942 346 aa17.02■□□□□ 0.32
PTCHD3-202ENST00000622555 SEPHS1P49903 392 aa17.02■□□□□ 0.32
PTCHD3-202ENST00000622555 ERVK-8P63133 956 aa17.02■□□□□ 0.32
PTCHD3-202ENST00000622555 OGFOD2Q6N063 350 aa17.02■□□□□ 0.32
PTCHD3-202ENST00000622555 VN1R4Q7Z5H5 301 aa17.02■□□□□ 0.32
PTCHD3-202ENST00000622555 ASPGQ86U10 573 aa17.02■□□□□ 0.32
PTCHD3-202ENST00000622555 ZFAND4Q86XD8 727 aa17.02■□□□□ 0.32
PTCHD3-202ENST00000622555 SLC13A3Q8WWT9 602 aa17.02■□□□□ 0.32
PTCHD3-202ENST00000622555 RERGQ96A58 199 aaPredicted RBP17.02■□□□□ 0.32
PTCHD3-202ENST00000622555 APIPQ96GX9 242 aa17.02■□□□□ 0.32
PTCHD3-202ENST00000622555 LRRC37BQ96QE4 947 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms