RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	CRLS1	Q9UJA2	301 aa		13.91	□□□□□ -0.18
SYNRG-231	ENST00000622045	CCL27	Q9Y4X3	112 aa		13.91	□□□□□ -0.18
SYNRG-231	ENST00000622045	CDK2AP1	O14519	115 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	KDELR3	O43731	214 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	ZNF780A	O75290	641 aa	Predicted RBP	13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	CASP9	P55211	416 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	ZXDB	P98169	803 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	DUSP4	Q13115	394 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	INO80D	Q53TQ3	878 aa	Predicted RBP	13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	PXDC1	Q5TGL8	231 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	FAM131A	Q6UXB0	335 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	USP50	Q70EL3	339 aa	Predicted RBP	13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	ZNF557	Q8N988	423 aa	Predicted RBP	13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	APOLD1	Q96LR9	279 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	ASPN	Q9BXN1	380 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	B4GALT3	O60512	393 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	GPX5	O75715	221 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	CLDN9	O95484	217 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	GLUD1	P00367	558 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	RPS19	P39019	145 aa	Known RBP	13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	CDH4	P55283	916 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	DOC2B	Q14184	412 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	FEV	Q99581	238 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	MGLL	Q99685	303 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	IMPAD1	Q9NX62	359 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	MS4A12	Q9NXJ0	267 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	ARL15	Q9NXU5	204 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	DUSP12	Q9UNI6	340 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	CFL2	Q9Y281	166 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	HSPB11	Q9Y547	144 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	NOS1AP	O75052	506 aa	Predicted RBP	13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	OAZ2	O95190	189 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	CKMT1A	P12532	417 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	ATP5C1	P36542	298 aa	Known RBP	13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	RHOA	P61586	193 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	DTX3	Q8N9I9	347 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	TM6SF2	Q9BZW4	377 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	C11orf54	Q9H0W9	315 aa	Predicted RBP	13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	TMEM184C	Q9NVA4	438 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	RLIM	Q9NVW2	624 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	SLC45A1	Q9Y2W3	748 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	DOCK3	Q8IZD9	2030 aa		13.9	□□□□□ -0.18
SYNRG-231	ENST00000622045	TNFRSF21	O75509	655 aa		13.9	□□□□□ -0.19
SYNRG-231	ENST00000622045	PRAMEF12	O95522	483 aa		13.9	□□□□□ -0.19
SYNRG-231	ENST00000622045	TACR1	P25103	407 aa		13.9	□□□□□ -0.19
SYNRG-231	ENST00000622045	NKX3-2	P78367	333 aa		13.9	□□□□□ -0.19
SYNRG-231	ENST00000622045	VN1R5	Q7Z5H4	357 aa		13.9	□□□□□ -0.19
SYNRG-231	ENST00000622045	CALHM3	Q86XJ0	350 aa		13.9	□□□□□ -0.19
SYNRG-231	ENST00000622045	WDR36	Q8NI36	951 aa	Known RBP	13.9	□□□□□ -0.19
SYNRG-231	ENST00000622045	ASB15	Q8WXK1	588 aa		13.9	□□□□□ -0.19
SYNRG-231	ENST00000622045	RIPOR3	Q96MK2	946 aa		13.9	□□□□□ -0.19
SYNRG-231	ENST00000622045	COL21A1	Q96P44	957 aa		13.9	□□□□□ -0.19
SYNRG-231	ENST00000622045	GDF15	Q99988	308 aa		13.9	□□□□□ -0.19
SYNRG-231	ENST00000622045	GABARAPL1	Q9H0R8	117 aa		13.9	□□□□□ -0.19
SYNRG-231	ENST00000622045	PCDH10	Q9P2E7	1040 aa		13.9	□□□□□ -0.19
SYNRG-231	ENST00000622045	RPS6KA6	Q9UK32	745 aa		13.9	□□□□□ -0.19
SYNRG-231	ENST00000622045	PCDHGB2	Q9Y5G2	931 aa		13.9	□□□□□ -0.19
SYNRG-231	ENST00000622045	PLXNB2	O15031	1838 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	TRAV19	A0A0A6YYK7	116 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	CLIC1	O00299	241 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	WWP2	O00308	870 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	ADRA2A	P08913	450 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	EBLN1	P0CF75	366 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	AKR1A1	P14550	325 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	SOX3	P41225	446 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	MAGEA2	P43356	314 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	GZMM	P51124	257 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	RING1	Q06587	406 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	CYP27C1	Q4G0S4	372 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	USP39	Q53GS9	565 aa	Known RBP	13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	CERS6	Q6ZMG9	384 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	SERINC5	Q86VE9	423 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	RBFA	Q8N0V3	343 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	PTPN18	Q99952	460 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	ABCB9	Q9NP78	766 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	OARD1	Q9Y530	152 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045		A0A0B4J293	547 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	WNT9A	O14904	365 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	PDYN	P01213	254 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	ITGAL	P20701	1170 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	KIR3DL1	P43629	444 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	UBE3A	Q05086	875 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	ZNF79	Q15937	498 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	GPR162	Q16538	588 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	ALG1L	Q6GMV1	187 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	ANGPTL8	Q6UXH0	198 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	OR52E4	Q8NGH9	312 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	SPPL2A	Q8TCT8	520 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	LKAAEAR1	Q8TD35	194 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	RNF31	Q96EP0	1072 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	BARHL1	Q9BZE3	327 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	IL17C	Q9P0M4	197 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	TMPRSS11E	Q9UL52	423 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	SNX7	Q9UNH6	387 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	CLDN11	O75508	207 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	ANXA5	P08758	320 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	HOXB6	P17509	224 aa	Known RBP	13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	ENG	P17813	658 aa		13.89	□□□□□ -0.19
SYNRG-231	ENST00000622045	POU1F1	P28069	291 aa		13.89	□□□□□ -0.19

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