RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 PHC1P78364 1004 aa20.57■□□□□ 0.88
SPAST-204ENST00000621856 MRPS22P82650 360 aaKnown RBP20.57■□□□□ 0.88
SPAST-204ENST00000621856 UGT8Q16880 541 aa20.57■□□□□ 0.88
SPAST-204ENST00000621856 OR4F3Q6IEY1 312 aa20.57■□□□□ 0.88
SPAST-204ENST00000621856 IYDQ6PHW0 289 aa20.57■□□□□ 0.88
SPAST-204ENST00000621856 MSANTD1Q6ZTZ1 278 aa20.57■□□□□ 0.88
SPAST-204ENST00000621856 IFNEQ86WN2 208 aa20.57■□□□□ 0.88
SPAST-204ENST00000621856 DHFR2Q86XF0 187 aa20.57■□□□□ 0.88
SPAST-204ENST00000621856 PLD3Q8IV08 490 aa20.57■□□□□ 0.88
SPAST-204ENST00000621856 OR2L3Q8NG85 312 aa20.57■□□□□ 0.88
SPAST-204ENST00000621856 DNAJB8Q8NHS0 232 aa20.57■□□□□ 0.88
SPAST-204ENST00000621856 NELL1Q92832 810 aa20.57■□□□□ 0.88
SPAST-204ENST00000621856 LRGUKQ96M69 825 aa20.57■□□□□ 0.88
SPAST-204ENST00000621856 KCTD14Q9BQ13 255 aaPredicted RBP20.57■□□□□ 0.88
SPAST-204ENST00000621856 TACO1Q9BSH4 297 aaKnown RBP20.57■□□□□ 0.88
SPAST-204ENST00000621856 MS4A8Q9BY19 250 aa20.57■□□□□ 0.88
SPAST-204ENST00000621856 ALG2Q9H553 416 aa20.57■□□□□ 0.88
SPAST-204ENST00000621856 IGKV1-8A0A0C4DH67 115 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 TRBC2A0A5B9 178 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 SCAMP2O15127 329 aaKnown RBP20.56■□□□□ 0.88
SPAST-204ENST00000621856 DNAJA2O60884 412 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 GBAP04062 536 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 C21orf58P58505 322 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 ZNF763Q0D2J5 394 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 ANKRD46Q86W74 232 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 MFSD2AQ8NA29 543 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 MIR1-1HGQ9H1L0 117 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 KCNH6Q9H252 994 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 TMEM184CQ9NVA4 438 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 VAPAQ9P0L0 249 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 THEGQ9P2T0 379 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 APOBEC3BQ9UH17 382 aaKnown RBP20.56■□□□□ 0.88
SPAST-204ENST00000621856 ARHGEF17Q96PE2 2063 aaPredicted RBP20.56■□□□□ 0.88
SPAST-204ENST00000621856 AXIN1O15169 862 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 ERN1O75460 977 aaKnown RBP20.56■□□□□ 0.88
SPAST-204ENST00000621856 ANP32DO95626 131 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 KLK1P06870 262 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 JUNDP17535 347 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 MAOBP27338 520 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 CD38P28907 300 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 MTPNP58546 118 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 C1orf61Q13536 156 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 DEPDC1Q5TB30 811 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 KHDRBS2Q5VWX1 349 aaKnown RBP20.56■□□□□ 0.88
SPAST-204ENST00000621856 ZFP1Q6P2D0 407 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 CYP2R1Q6VVX0 501 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 LRRC74BQ6ZQY2 392 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 SLC9B2Q86UD5 537 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 FBXL6Q8N531 539 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 TBC1D19Q8N5T2 526 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 OR8J3Q8NGG0 315 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 PATE1Q8WXA2 126 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 ANKRD27Q96NW4 1050 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 DPH7Q9BTV6 452 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 TRIM15Q9C019 465 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 REXO4Q9GZR2 422 aaKnown RBP20.56■□□□□ 0.88
SPAST-204ENST00000621856 MUTYHQ9UIF7 546 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 MCM8Q9UJA3 840 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 MAN2B2Q9Y2E5 1009 aa20.56■□□□□ 0.88
SPAST-204ENST00000621856 A0A096LPI6 279 aa20.55■□□□□ 0.88
SPAST-204ENST00000621856 MAP3K13O43283 966 aa20.55■□□□□ 0.88
SPAST-204ENST00000621856 LCMT2O60294 686 aaKnown RBP20.55■□□□□ 0.88
SPAST-204ENST00000621856 SEMA3DO95025 777 aa20.55■□□□□ 0.88
SPAST-204ENST00000621856 WNT1P04628 370 aa20.55■□□□□ 0.88
SPAST-204ENST00000621856 SERPIND1P05546 499 aa20.55■□□□□ 0.88
SPAST-204ENST00000621856 SELPLGQ14242 412 aa20.55■□□□□ 0.88
SPAST-204ENST00000621856 ANKRD26P1Q6NSI1 321 aa20.55■□□□□ 0.88
SPAST-204ENST00000621856 ADGRF3Q8IZF5 1079 aa20.55■□□□□ 0.88
SPAST-204ENST00000621856 TMEM132CQ8N3T6 1108 aa20.55■□□□□ 0.88
SPAST-204ENST00000621856 TTLQ8NG68 377 aa20.55■□□□□ 0.88
SPAST-204ENST00000621856 HSPA12BQ96MM6 686 aa20.55■□□□□ 0.88
SPAST-204ENST00000621856 F2RL3Q96RI0 385 aa20.55■□□□□ 0.88
SPAST-204ENST00000621856 PRPF18Q99633 342 aaKnown RBP20.55■□□□□ 0.88
SPAST-204ENST00000621856 INPP5KQ9BT40 448 aa20.55■□□□□ 0.88
SPAST-204ENST00000621856 PAIP1Q9H074 479 aaKnown RBP20.55■□□□□ 0.88
SPAST-204ENST00000621856 POT1Q9NUX5 634 aa20.55■□□□□ 0.88
SPAST-204ENST00000621856 CPNE7Q9UBL6 633 aa20.55■□□□□ 0.88
SPAST-204ENST00000621856 EGFL7Q9UHF1 273 aa20.55■□□□□ 0.88
SPAST-204ENST00000621856 TDRD6O60522 2096 aaKnown RBP20.55■□□□□ 0.88
SPAST-204ENST00000621856 OR5K4A6NMS3 321 aa20.54■□□□□ 0.88
SPAST-204ENST00000621856 BTN3A3O00478 584 aa20.54■□□□□ 0.88
SPAST-204ENST00000621856 GPR18Q14330 331 aa20.54■□□□□ 0.88
SPAST-204ENST00000621856 CPTPQ5TA50 214 aa20.54■□□□□ 0.88
SPAST-204ENST00000621856 SLC36A4Q6YBV0 504 aa20.54■□□□□ 0.88
SPAST-204ENST00000621856 C16orf78Q8WTQ4 265 aa20.54■□□□□ 0.88
SPAST-204ENST00000621856 SLC22A18Q96BI1 424 aa20.54■□□□□ 0.88
SPAST-204ENST00000621856 CENPKQ9BS16 269 aa20.54■□□□□ 0.88
SPAST-204ENST00000621856 SORBS1Q9BX66 1292 aaKnown RBP20.54■□□□□ 0.88
SPAST-204ENST00000621856 PIF1Q9H611 641 aa20.54■□□□□ 0.88
SPAST-204ENST00000621856 SERHLQ9NQF3 203 aa20.54■□□□□ 0.88
SPAST-204ENST00000621856 FAM120CQ9NX05 1096 aaKnown RBP20.54■□□□□ 0.88
SPAST-204ENST00000621856 NEUROG3Q9Y4Z2 214 aa20.54■□□□□ 0.88
SPAST-204ENST00000621856 TRIOO75962 3097 aa20.54■□□□□ 0.88
SPAST-204ENST00000621856 KIR2DS5A0A0G2JLQ3 304 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 A0A0G2JNG1 304 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 A0A1W2PR77 199 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 H3BNX3 289 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 KIR2DS3K7RE56 304 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 PLPP1O14494 284 aa20.53■□□□□ 0.88
SPAST-204ENST00000621856 RFXANKO14593 260 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms