RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 RSC1A1Q92681 617 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 PPP3R2Q96LZ3 170 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 NECTIN4Q96NY8 510 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 S100A14Q9HCY8 104 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 POLMQ9NP87 494 aaPredicted RBP10.12□□□□□ -0.79
VPS11-208ENST00000621676 UCKL1Q9NWZ5 548 aa10.12□□□□□ -0.79
VPS11-208ENST00000621676 TEX10Q9NXF1 929 aaPredicted RBP10.12□□□□□ -0.79
VPS11-208ENST00000621676 ZNF624Q9P2J8 865 aaPredicted RBP10.12□□□□□ -0.79
VPS11-208ENST00000621676 PIEZO2Q9H5I5 2752 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 SHISA7A6NL88 538 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 FXYD1O00168 92 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 LIN7AO14910 233 aaPredicted RBP10.11□□□□□ -0.79
VPS11-208ENST00000621676 CFIP05156 583 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 ALAS2P22557 587 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 HNRNPA2B1P22626 353 aaKnown RBP10.11□□□□□ -0.79
VPS11-208ENST00000621676 SFSWAPQ12872 951 aaKnown RBP10.11□□□□□ -0.79
VPS11-208ENST00000621676 GPR18Q14330 331 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 KCNAB1Q14722 419 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 TBCCQ15814 346 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 TJAP1Q5JTD0 557 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.11□□□□□ -0.79
VPS11-208ENST00000621676 ENPP6Q6UWR7 440 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 SLCO4C1Q6ZQN7 724 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 VTCN1Q7Z7D3 282 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 NCSTNQ92542 709 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 FAM120BQ96EK7 910 aaKnown RBP10.11□□□□□ -0.79
VPS11-208ENST00000621676 PDLIM5Q96HC4 596 aaKnown RBP10.11□□□□□ -0.79
VPS11-208ENST00000621676 GUCD1Q96NT3 240 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 GBP5Q96PP8 586 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 OR2M4Q96R27 311 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 C1QTNF2Q9BXJ5 285 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 TBC1D17Q9HA65 648 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 MRPS30Q9NP92 439 aaKnown RBP10.11□□□□□ -0.79
VPS11-208ENST00000621676 RHCGQ9UBD6 479 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 STOML1Q9UBI4 398 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 MGAQ8IWI9 3026 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 CEP295Q9C0D2 2601 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 A0A1B0GTW7 788 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 A0A1W2PP18 115 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 NOBOXO60393 691 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 CHRNB1P11230 501 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 ZNF23P17027 643 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 GPC1P35052 558 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 KIR3DL1P43629 444 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 MAPK10P53779 464 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 RPE65Q16518 533 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 TRMT5Q32P41 509 aaKnown RBP10.11□□□□□ -0.79
VPS11-208ENST00000621676 SPDYE7PQ495Y7 208 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 PIGGQ5H8A4 983 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 METRNLQ641Q3 311 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 CCDC116Q8IYX3 515 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 OR5T3Q8NGG3 340 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 GLMNQ92990 594 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 ZNF570Q96NI8 536 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 TRPC4Q9UBN4 977 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 APOBEC3BQ9UH17 382 aaKnown RBP10.11□□□□□ -0.79
VPS11-208ENST00000621676 MAU2Q9Y6X3 613 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 ZFHX4Q86UP3 3567 aa10.11□□□□□ -0.79
VPS11-208ENST00000621676 LOC105369274A0A096LPK9 316 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 LOC102723532A0A0G2JNH3 316 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 CPED1A4D0V7 1026 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 PATE3B3GLJ2 98 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 GMNNO75496 209 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 MYO1DO94832 1006 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 C1GALT1C1LP0DN25 315 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 CYP4B1P13584 511 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 POU2F1P14859 743 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 DDX5P17844 614 aaKnown RBP10.1□□□□□ -0.79
VPS11-208ENST00000621676 CLNS1AP54105 237 aaKnown RBP10.1□□□□□ -0.79
VPS11-208ENST00000621676 TRIM25Q14258 630 aaKnown RBP10.1□□□□□ -0.79
VPS11-208ENST00000621676 TMEM52BQ4KMG9 183 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 ZNF385BQ569K4 471 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 EOGTQ5NDL2 527 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 KIAA1614Q5VZ46 1190 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 TMEM184AQ6ZMB5 413 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 OFCC1Q8IZS5 231 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 OR4N4Q8N0Y3 316 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 MAGEE2Q8TD90 523 aaPredicted RBP10.1□□□□□ -0.79
VPS11-208ENST00000621676 CGREF1Q99674 301 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 TMEM74BQ9NUR3 256 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 SLC25A37Q9NYZ2 338 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 EPS15L1Q9UBC2 864 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 NDOR1Q9UHB4 597 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 SH3GLB1Q9Y371 365 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 TICRRQ7Z2Z1 1910 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 HAT1O14929 419 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 PLRG1O43660 514 aaKnown RBP10.1□□□□□ -0.79
VPS11-208ENST00000621676 KLK8O60259 260 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 JUPP14923 745 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 AP1S2P56377 157 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 BTN3A2P78410 334 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 IRX1P78414 480 aaPredicted RBP10.1□□□□□ -0.79
VPS11-208ENST00000621676 SIM1P81133 766 aaPredicted RBP10.1□□□□□ -0.79
VPS11-208ENST00000621676 PRR23BQ6ZRT6 265 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 RTL10Q7L3V2 364 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 PDZD3Q86UT5 571 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 DCUN1D3Q8IWE4 304 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 KLHDC7BQ96G42 594 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 WDR92Q96MX6 357 aa10.1□□□□□ -0.79
VPS11-208ENST00000621676 ASB2Q96Q27 587 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms