RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 C19orf48Q6RUI8 117 aa10.04□□□□□ -0.8
VPS11-207ENST00000620429 UNC5DQ6UXZ4 953 aa10.04□□□□□ -0.8
VPS11-207ENST00000620429 DTWD1Q8N5C7 304 aa10.04□□□□□ -0.8
VPS11-207ENST00000620429 PMM1Q92871 262 aa10.04□□□□□ -0.8
VPS11-207ENST00000620429 KIAA1143Q96AT1 154 aaPredicted RBP10.04□□□□□ -0.8
VPS11-207ENST00000620429 ISG20Q96AZ6 181 aaKnown RBP10.04□□□□□ -0.8
VPS11-207ENST00000620429 ITCHQ96J02 903 aa10.04□□□□□ -0.8
VPS11-207ENST00000620429 MRGPRX2Q96LB1 330 aa10.04□□□□□ -0.8
VPS11-207ENST00000620429 RTP3Q9BQQ7 232 aa10.04□□□□□ -0.8
VPS11-207ENST00000620429 RGS18Q9NS28 235 aa10.04□□□□□ -0.8
VPS11-207ENST00000620429 PIGVQ9NUD9 493 aa10.04□□□□□ -0.8
VPS11-207ENST00000620429 RBFOX1Q9NWB1 397 aaKnown RBP10.04□□□□□ -0.8
VPS11-207ENST00000620429 FLRT1Q9NZU1 646 aa10.04□□□□□ -0.8
VPS11-207ENST00000620429 AASSQ9UDR5 926 aa10.04□□□□□ -0.8
VPS11-207ENST00000620429 NDRG3Q9UGV2 375 aa10.04□□□□□ -0.8
VPS11-207ENST00000620429 PLCL2Q9UPR0 1127 aa10.04□□□□□ -0.8
VPS11-207ENST00000620429 PLXNA1Q9UIW2 1896 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 A8MT66 165 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 E9PAM4 449 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 PITPNM1O00562 1244 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 PPP6CO00743 305 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 GNGT2O14610 69 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 EEDO75530 441 aaKnown RBP10.03□□□□□ -0.8
VPS11-207ENST00000620429 MPC2O95563 127 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 NPPAP01160 153 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 HLA-DQB1P01920 261 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 AKAP5P24588 427 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 LMO2P25791 158 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 KCNQ1P51787 676 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 HSF2Q03933 536 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 FSCN1Q16658 493 aaKnown RBP10.03□□□□□ -0.8
VPS11-207ENST00000620429 ANKRD39Q53RE8 183 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 HES5Q5TA89 166 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 ESRP1Q6NXG1 681 aaKnown RBP10.03□□□□□ -0.8
VPS11-207ENST00000620429 KLHL17Q6TDP4 642 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 TMEM179BQ7Z7N9 219 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 UNC93AQ86WB7 457 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 STX12Q86Y82 276 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 NPWQ8N729 165 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 CLHC1Q8NHS4 586 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 PCNPQ8WW12 178 aaKnown RBP10.03□□□□□ -0.8
VPS11-207ENST00000620429 SLC5A11Q8WWX8 675 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 VAT1Q99536 393 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 RAD9AQ99638 391 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 BIN3Q9NQY0 253 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 POLE3Q9NRF9 147 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 ABCC13Q9NSE7 274 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 PKP3Q9Y446 797 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 COL1A2P08123 1366 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 TNRC18O15417 2968 aaPredicted RBP10.03□□□□□ -0.8
VPS11-207ENST00000620429 HNRNPCL2B2RXH8 293 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 C9JVG2 144 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 ORC5O43913 435 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 IPO13O94829 963 aaKnown RBP10.03□□□□□ -0.8
VPS11-207ENST00000620429 IFNA4P05014 189 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 GGT1P19440 569 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 SLC1A2P43004 574 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 SMAD2Q15796 467 aaKnown RBP10.03□□□□□ -0.8
VPS11-207ENST00000620429 CCL14Q16627 93 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 KYAT1Q16773 422 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 SYPL2Q5VXT5 272 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 ALG1LQ6GMV1 187 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 SLC27A4Q6P1M0 643 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 PKN3Q6P5Z2 889 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 PLEKHH3Q7Z736 793 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 ZNF675Q8TD23 568 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 TMEM40Q8WWA1 233 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 TMEM74Q96NL1 305 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 NPY6RQ99463 290 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 ZNF251Q9BRH9 671 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 GABARAPL1Q9H0R8 117 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 NXF3Q9H4D5 531 aaKnown RBP10.03□□□□□ -0.8
VPS11-207ENST00000620429 AKTIPQ9H8T0 292 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 PRDM9Q9NQV7 894 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 OLA1Q9NTK5 396 aaKnown RBP10.03□□□□□ -0.8
VPS11-207ENST00000620429 BABAM2Q9NXR7 383 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 KLK14Q9P0G3 267 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 EDARQ9UNE0 448 aa10.03□□□□□ -0.8
VPS11-207ENST00000620429 A0A087X1B8 175 aa10.02□□□□□ -0.81
VPS11-207ENST00000620429 ASPDHA6ND91 283 aa10.02□□□□□ -0.81
VPS11-207ENST00000620429 WWP2O00308 870 aa10.02□□□□□ -0.81
VPS11-207ENST00000620429 WBP4O75554 376 aaKnown RBP10.02□□□□□ -0.81
VPS11-207ENST00000620429 GPX5O75715 221 aa10.02□□□□□ -0.81
VPS11-207ENST00000620429 CTPS1P17812 591 aa10.02□□□□□ -0.81
VPS11-207ENST00000620429 PRKACGP22612 351 aa10.02□□□□□ -0.81
VPS11-207ENST00000620429 IGFBP5P24593 272 aa10.02□□□□□ -0.81
VPS11-207ENST00000620429 SOX11P35716 441 aa10.02□□□□□ -0.81
VPS11-207ENST00000620429 MRPL19P49406 292 aaKnown RBP10.02□□□□□ -0.81
VPS11-207ENST00000620429 CLCN4P51793 760 aa10.02□□□□□ -0.81
VPS11-207ENST00000620429 VEPH1Q14D04 833 aa10.02□□□□□ -0.81
VPS11-207ENST00000620429 FUT11Q495W5 492 aa10.02□□□□□ -0.81
VPS11-207ENST00000620429 PCID2Q5JVF3 399 aa10.02□□□□□ -0.81
VPS11-207ENST00000620429 RTP2Q5QGT7 225 aa10.02□□□□□ -0.81
VPS11-207ENST00000620429 LCN1P1Q5VSP4 162 aa10.02□□□□□ -0.81
VPS11-207ENST00000620429 LUZP2Q86TE4 346 aa10.02□□□□□ -0.81
VPS11-207ENST00000620429 C12orf40Q86WS4 652 aa10.02□□□□□ -0.81
VPS11-207ENST00000620429 METTL23Q86XA0 190 aa10.02□□□□□ -0.81
VPS11-207ENST00000620429 LAX1Q8IWV1 398 aa10.02□□□□□ -0.81
VPS11-207ENST00000620429 MS4A15Q8N5U1 240 aa10.02□□□□□ -0.81
VPS11-207ENST00000620429 SLC37A3Q8NCC5 494 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms