RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 SMAD6O43541 496 aaKnown RBP12.61□□□□□ -0.39
SKP2-209ENST00000620197 TSPAN3O60637 253 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 EPN2O95208 641 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 SERPINB1P30740 379 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 NR4A2P43354 598 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 SELENOWP63302 87 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 ARHGEF7Q14155 803 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 SYT16Q17RD7 645 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 LIPJQ5W064 366 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 ZNF770Q6IQ21 691 aaPredicted RBP12.61□□□□□ -0.39
SKP2-209ENST00000620197 PDE12Q6L8Q7 609 aaKnown RBP12.61□□□□□ -0.39
SKP2-209ENST00000620197 VN1R5Q7Z5H4 357 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 VRK3Q8IV63 474 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 FAM181AQ8N9Y4 354 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 ATL1Q8WXF7 558 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 HTRA1Q92743 480 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 ZNF486Q96H40 463 aaPredicted RBP12.61□□□□□ -0.39
SKP2-209ENST00000620197 COL21A1Q96P44 957 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 P2RY13Q9BPV8 354 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 RLIMQ9NVW2 624 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 PCDHGB6Q9Y5F9 930 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 A0A075B6Q4 140 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 SLC35F4A4IF30 521 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 MYO1GB0I1T2 1018 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 PSMD11O00231 422 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 TLL1O43897 1013 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 LAMP1P11279 417 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 CARTPTQ16568 116 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 NDUFA5Q16718 116 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 CRTC1Q6UUV9 634 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 OR6F1Q8NGZ6 308 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 APOBEC4Q8WW27 367 aaKnown RBP12.61□□□□□ -0.39
SKP2-209ENST00000620197 CRELD1Q96HD1 420 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 FEVQ99581 238 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 CEP44Q9C0F1 390 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 ELOVL6Q9H5J4 265 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 TPT1P8Q9HAU6 139 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 MKLN1Q9UL63 735 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 H0YIV9 168 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 H7C4K7 107 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 TBX1O43435 398 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 KLHL18O94889 574 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 LRATO95237 230 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 OLFM2O95897 454 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 RRM2P31350 389 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 CSKP41240 450 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 PPIGQ13427 754 aaKnown RBP eCLIP12.61□□□□□ -0.39
SKP2-209ENST00000620197 PTCHD3Q3KNS1 767 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 ANKS3Q6ZW76 656 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 ZNF367Q7RTV3 350 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 MMAAQ8IVH4 418 aaKnown RBP12.61□□□□□ -0.39
SKP2-209ENST00000620197 CLIP4Q8N3C7 705 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 RNF175Q8N4F7 328 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 ATG16L2Q8NAA4 619 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 APOLD1Q96LR9 279 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 EMILIN2Q9BXX0 1053 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 OR51E2Q9H255 320 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 BRF2Q9HAW0 419 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 ABCB10Q9NRK6 738 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 ARL15Q9NXU5 204 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 HCSTQ9UBK5 93 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 FTSJ1Q9UET6 329 aa12.61□□□□□ -0.39
SKP2-209ENST00000620197 C2orf78A6NCI8 922 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 PIPP12273 146 aaPredicted RBP12.6□□□□□ -0.39
SKP2-209ENST00000620197 PTX3P26022 381 aaPredicted RBP12.6□□□□□ -0.39
SKP2-209ENST00000620197 PCYT1AP49585 367 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 PTSQ03393 145 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 MICAQ29983 383 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 SOWAHCQ53LP3 525 aaPredicted RBP12.6□□□□□ -0.39
SKP2-209ENST00000620197 CST9Q5W186 159 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 TSPAN33Q86UF1 283 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 SLC5A8Q8N695 610 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 AMER2Q8N7J2 671 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 SLC43A3Q8NBI5 491 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 KBTBD8Q8NFY9 601 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 C17orf50Q8WW18 174 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 KCNC2Q96PR1 638 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 NIPSNAP1Q9BPW8 284 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 TTPALQ9BTX7 342 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 VN1R3Q9BXE9 311 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 PRDM8Q9NQV8 689 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 RAD18Q9NS91 495 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 GPR83Q9NYM4 423 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 CNOT2Q9NZN8 540 aaKnown RBP12.6□□□□□ -0.39
SKP2-209ENST00000620197 CORO2BQ9UQ03 480 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 ATP11BQ9Y2G3 1177 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 SEC14L5O43304 696 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 HLA-EP13747 358 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 HSD3B1P14060 373 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 HSD3B2P26439 372 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 GPR50Q13585 617 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 KCNC3Q14003 757 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 SSX1Q16384 188 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 OR2A14Q96R47 310 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 CCDC32Q9BV29 185 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 TP63Q9H3D4 680 aaPredicted RBP12.6□□□□□ -0.39
SKP2-209ENST00000620197 SLC25A19Q9HC21 320 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 KIF17Q9P2E2 1029 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 ZNF229Q9UJW7 825 aa12.6□□□□□ -0.39
SKP2-209ENST00000620197 SLC6A14Q9UN76 642 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms