RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 CNTN4Q8IWV2 1026 aa11.27□□□□□ -0.61
UPF3B-204ENST00000619445 HORMAD2Q8N7B1 307 aa11.27□□□□□ -0.61
UPF3B-204ENST00000619445 ABHD11Q8NFV4 315 aa11.27□□□□□ -0.61
UPF3B-204ENST00000619445 OR9A4Q8NGU2 314 aa11.27□□□□□ -0.61
UPF3B-204ENST00000619445 M1APQ8TC57 530 aa11.27□□□□□ -0.61
UPF3B-204ENST00000619445 SLC13A3Q8WWT9 602 aa11.27□□□□□ -0.61
UPF3B-204ENST00000619445 TM4SF19Q96DZ7 209 aa11.27□□□□□ -0.61
UPF3B-204ENST00000619445 SARGQ9BW04 601 aa11.27□□□□□ -0.61
UPF3B-204ENST00000619445 SGPP1Q9BX95 441 aa11.27□□□□□ -0.61
UPF3B-204ENST00000619445 IARS2Q9NSE4 1012 aaKnown RBP11.27□□□□□ -0.61
UPF3B-204ENST00000619445 ASIC3Q9UHC3 531 aa11.27□□□□□ -0.61
UPF3B-204ENST00000619445 PDE10AQ9Y233 779 aa11.27□□□□□ -0.61
UPF3B-204ENST00000619445 SCN3AQ9NY46 2000 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 PCNX1Q96RV3 2341 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 URADA6NGE7 173 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 WDPCPO95876 746 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 ITGAMP11215 1152 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 TDGF1P3P51864 188 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 TAS2R50P59544 299 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 MPP1Q00013 466 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 DHX9Q08211 1270 aaKnown RBP11.26□□□□□ -0.61
UPF3B-204ENST00000619445 PDAP1Q13442 181 aaKnown RBP11.26□□□□□ -0.61
UPF3B-204ENST00000619445 NAE1Q13564 534 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 NAA30Q147X3 362 aaPredicted RBP11.26□□□□□ -0.61
UPF3B-204ENST00000619445 MEP1AQ16819 746 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 BTBD16Q32M84 506 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 H3F3CQ6NXT2 135 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 TMEM207Q6UWW9 146 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 GFRALQ6UXV0 394 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 RPTNQ6XPR3 784 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 SYDE1Q6ZW31 735 aaPredicted RBP11.26□□□□□ -0.61
UPF3B-204ENST00000619445 PLD3Q8IV08 490 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 LGI4Q8N135 537 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 PDIK1LQ8N165 341 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 SLC5A8Q8N695 610 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 MFSD9Q8NBP5 474 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 EEF1AKMT1Q8WVE0 214 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 SLCO2A1Q92959 643 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 LRRC39Q96DD0 335 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 MS4A14Q96JA4 679 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 RUNDC3BQ96NL0 473 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 OSBPL9Q96SU4 736 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 LPAR4Q99677 370 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 ARL15Q9NXU5 204 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 PLA2G3Q9NZ20 509 aa11.26□□□□□ -0.61
UPF3B-204ENST00000619445 KLF2Q9Y5W3 355 aaPredicted RBP11.26□□□□□ -0.61
UPF3B-204ENST00000619445 MAGEB17A8MXT2 336 aa11.25□□□□□ -0.61
UPF3B-204ENST00000619445 DNALI1O14645 258 aaPredicted RBP11.25□□□□□ -0.61
UPF3B-204ENST00000619445 NDC80O14777 642 aa11.25□□□□□ -0.61
UPF3B-204ENST00000619445 FFAR3O14843 346 aa11.25□□□□□ -0.61
UPF3B-204ENST00000619445 GPR42O15529 346 aa11.25□□□□□ -0.61
UPF3B-204ENST00000619445 IL1RNP18510 177 aa11.25□□□□□ -0.61
UPF3B-204ENST00000619445 MAT1AQ00266 395 aaKnown RBP11.25□□□□□ -0.61
UPF3B-204ENST00000619445 ACTN3Q08043 901 aaPredicted RBP11.25□□□□□ -0.61
UPF3B-204ENST00000619445 RGS1Q08116 209 aa11.25□□□□□ -0.61
UPF3B-204ENST00000619445 ART3Q13508 389 aa11.25□□□□□ -0.61
UPF3B-204ENST00000619445 NSDHLQ15738 373 aa11.25□□□□□ -0.61
UPF3B-204ENST00000619445 SYT16Q17RD7 645 aa11.25□□□□□ -0.61
UPF3B-204ENST00000619445 ACER2Q5QJU3 275 aa11.25□□□□□ -0.61
UPF3B-204ENST00000619445 ZNF787Q6DD87 383 aa11.25□□□□□ -0.61
UPF3B-204ENST00000619445 PAQR3Q6TCH7 311 aa11.25□□□□□ -0.61
UPF3B-204ENST00000619445 ABHD13Q7L211 337 aa11.25□□□□□ -0.61
UPF3B-204ENST00000619445 TMEM178AQ8NBL3 297 aa11.25□□□□□ -0.61
UPF3B-204ENST00000619445 FAM98AQ8NCA5 519 aaKnown RBP11.25□□□□□ -0.61
UPF3B-204ENST00000619445 PLPP5Q8NEB5 264 aa11.25□□□□□ -0.61
UPF3B-204ENST00000619445 ANKRD7Q92527 254 aa11.25□□□□□ -0.61
UPF3B-204ENST00000619445 LINGO1Q96FE5 620 aa11.25□□□□□ -0.61
UPF3B-204ENST00000619445 CERS2Q96G23 380 aa11.25□□□□□ -0.61
UPF3B-204ENST00000619445 TAAR6Q96RI8 345 aa11.25□□□□□ -0.61
UPF3B-204ENST00000619445 MESP1Q9BRJ9 268 aa11.25□□□□□ -0.61
UPF3B-204ENST00000619445 UTP23Q9BRU9 249 aaKnown RBP11.25□□□□□ -0.61
UPF3B-204ENST00000619445 SYNPO2LQ9H987 977 aa11.25□□□□□ -0.61
UPF3B-204ENST00000619445 KCNK13Q9HB14 408 aa11.25□□□□□ -0.61
UPF3B-204ENST00000619445 MMP25Q9NPA2 562 aa11.25□□□□□ -0.61
UPF3B-204ENST00000619445 COPG2Q9UBF2 871 aa11.25□□□□□ -0.61
UPF3B-204ENST00000619445 SEC14L3Q9UDX4 400 aa11.25□□□□□ -0.61
UPF3B-204ENST00000619445 TRBC2A0A5B9 178 aa11.24□□□□□ -0.61
UPF3B-204ENST00000619445 SYNDIG1LA6NDD5 238 aa11.24□□□□□ -0.61
UPF3B-204ENST00000619445 A8MUI8 341 aa11.24□□□□□ -0.61
UPF3B-204ENST00000619445 TTI1O43156 1089 aa11.24□□□□□ -0.61
UPF3B-204ENST00000619445 ZG16O60844 167 aa11.24□□□□□ -0.61
UPF3B-204ENST00000619445 SEC24DO94855 1032 aaPredicted RBP11.24□□□□□ -0.61
UPF3B-204ENST00000619445 CDH1P12830 882 aa11.24□□□□□ -0.61
UPF3B-204ENST00000619445 CD46P15529 392 aa11.24□□□□□ -0.61
UPF3B-204ENST00000619445 NPPBP16860 134 aa11.24□□□□□ -0.61
UPF3B-204ENST00000619445 TCP1P17987 556 aaKnown RBP11.24□□□□□ -0.61
UPF3B-204ENST00000619445 AHRP35869 848 aa11.24□□□□□ -0.61
UPF3B-204ENST00000619445 FRG1Q14331 258 aaKnown RBP11.24□□□□□ -0.61
UPF3B-204ENST00000619445 MORF4L2Q15014 288 aa11.24□□□□□ -0.61
UPF3B-204ENST00000619445 ABRAXAS2Q15018 415 aa11.24□□□□□ -0.61
UPF3B-204ENST00000619445 KRTCAP3Q53RY4 240 aa11.24□□□□□ -0.61
UPF3B-204ENST00000619445 ZNF766Q5HY98 468 aa11.24□□□□□ -0.61
UPF3B-204ENST00000619445 FAM45BPQ6NSW5 357 aa11.24□□□□□ -0.61
UPF3B-204ENST00000619445 ANKRD37Q7Z713 158 aa11.24□□□□□ -0.61
UPF3B-204ENST00000619445 FJX1Q86VR8 437 aa11.24□□□□□ -0.61
UPF3B-204ENST00000619445 SLC26A11Q86WA9 606 aa11.24□□□□□ -0.61
UPF3B-204ENST00000619445 AFAP1L2Q8N4X5 818 aa11.24□□□□□ -0.61
UPF3B-204ENST00000619445 TRPV3Q8NET8 790 aa11.24□□□□□ -0.61
UPF3B-204ENST00000619445 OR4K1Q8NGD4 311 aa11.24□□□□□ -0.61
UPF3B-204ENST00000619445 OR56A3Q8NH54 315 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms