RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 PTGR1Q14914 329 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 LAPTM4AQ15012 233 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 PON2Q15165 354 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 CTU2Q2VPK5 515 aaKnown RBP6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 ADPRMQ3LIE5 342 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 TUBA3EQ6PEY2 450 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 ZNF605Q86T29 641 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 PHACTR4Q8IZ21 702 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 OR9Q1Q8NGQ5 310 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 DNAJB8Q8NHS0 232 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 RHOXF1Q8NHV9 184 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 UTP15Q8TED0 518 aaKnown RBP6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 MTFMTQ96DP5 389 aaKnown RBP6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 MAGIXQ9H6Y5 334 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 NEK6Q9HC98 313 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 HEBP1Q9NRV9 189 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 POU2F3Q9UKI9 436 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 ZNF490Q9ULM2 529 aaPredicted RBP6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 IFT52Q9Y366 437 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 PEX16Q9Y5Y5 336 aa6.77□□□□□ -1.33
SRGAP3-213ENST00000618999 GREB1Q4ZG55 1949 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 LINC00854A0A1B0GVQ3 168 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 A8MX80 341 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 FAM47E-STBD1D6RA91 191 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 ARHGEF9O43307 516 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 MITFO75030 526 aaPredicted RBP6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 WDR47O94967 919 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 EPN2O95208 641 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 IGSF6O95976 241 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 EPOP01588 193 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 RPLP0P05388 317 aaKnown RBP6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 ZNF7P17097 686 aaPredicted RBP6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 CTPS1P17812 591 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 POLR2EP19388 210 aaKnown RBP6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 TCEA1P23193 301 aaKnown RBP6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 HLA-FP30511 346 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 GKP32189 559 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 GGT5P36269 586 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 HTR6P50406 440 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 PPP2R2BQ00005 443 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 HMGCS1Q01581 520 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 PIN1Q13526 163 aaPredicted RBP6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 TTLL9Q3SXZ7 439 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 ZFP69Q49AA0 526 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 ATAT1Q5SQI0 421 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 CES5AQ6NT32 575 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 BRICD5Q6PL45 260 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 GOLGA7Q7Z5G4 137 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 ANKRD46Q86W74 232 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 YAF2Q8IY57 180 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 OR2T11Q8NH01 316 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 FAR1Q8WVX9 515 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 MYLIPQ8WY64 445 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 FGF13Q92913 245 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 SLC38A4Q969I6 547 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 ZNF583Q96ND8 569 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 CCDC115Q96NT0 180 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 MBOAT4Q96T53 435 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 LTB4R2Q9NPC1 389 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 SNX8Q9Y5X2 465 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 HSPE1-MOB4S4R3N1 261 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 ASPDHA6ND91 283 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 EPOPA6NHQ4 379 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 A8MU76 341 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 LOC110117498-PIK3R3F6TDL0 507 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 RETP07949 1114 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 PRSS56P0CW18 603 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 FPR1P21462 350 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 CTSOP43234 321 aaPredicted RBP6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 ERVPABLB-1P60509 514 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 ISL1P61371 349 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 OLR1P78380 273 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 IHHQ14623 411 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 TAF1AQ15573 450 aaPredicted RBP6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 CTF1Q16619 201 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 TIGD6Q17RP2 521 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 INAVAQ3KP66 663 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 XKR7Q5GH72 579 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 TCEAL5Q5H9L2 206 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 FAM209AQ5JX71 171 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 PRSS36Q5K4E3 855 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 ARMC12Q5T9G4 340 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 ZNF544Q6NX49 715 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 ZNF621Q6ZSS3 439 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 ADGRG2Q8IZP9 1017 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 CLIP4Q8N3C7 705 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 FAM86B1Q8N7N1 296 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 SELENOMQ8WWX9 145 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 ELMO1Q92556 727 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 TSSK3Q96PN8 268 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 SMIM14Q96QK8 99 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 GDF15Q99988 308 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 FBXO8Q9NRD0 319 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 POLR3BQ9NW08 1133 aaPredicted RBP6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 CRNNQ9UBG3 495 aaPredicted RBP6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 SLCO3A1Q9UIG8 710 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 TESMINQ9Y4I5 508 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 LOC285095A0A1B0GVY8 99 aa6.76□□□□□ -1.33
SRGAP3-213ENST00000618999 CPSF4O95639 269 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms