RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 HMOX2P30519 316 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 FOXN2P32314 431 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 LSP1P33241 339 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 NPY2RP49146 381 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 TTPAP49638 278 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 GDF10P55107 478 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 HSD17B7P56937 341 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 KCNK10P57789 538 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 ELF3P78545 371 aaPredicted RBP8.19□□□□□ -1.1
GPC6-202ENST00000617456 AIMP2Q13155 320 aaKnown RBP8.19□□□□□ -1.1
GPC6-202ENST00000617456 OLIG2Q13516 323 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 SPARCL1Q14515 664 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 CASP8Q14790 479 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 POU6F1Q14863 301 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 KIR2DS3Q14952 304 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 RPS6KA1Q15418 735 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 MOGQ16653 247 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 PCID2Q5JVF3 399 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 TSTD2Q5T7W7 516 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 AADACL2Q6P093 401 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 WDR93Q6P2C0 686 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 LRRC6Q86X45 466 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 PIANPQ8IYJ0 282 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 ADGRF3Q8IZF5 1079 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 OR52E1Q8NGJ3 308 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 OR13J1Q8NGT2 312 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 OR2Y1Q8NGV0 311 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 FAR1Q8WVX9 515 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 SLC22A18Q96BI1 424 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 MAGEB10Q96LZ2 347 aaPredicted RBP8.19□□□□□ -1.1
GPC6-202ENST00000617456 NUF2Q9BZD4 464 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 IL22Q9GZX6 179 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 SCPEP1Q9HB40 452 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 ETNK1Q9HBU6 452 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 PFDN4Q9NQP4 134 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 ACTR10Q9NZ32 417 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 SMARCAL1Q9NZC9 954 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 DHCR7Q9UBM7 475 aaKnown RBP8.19□□□□□ -1.1
GPC6-202ENST00000617456 MTRF1LQ9UGC7 380 aaKnown RBP8.19□□□□□ -1.1
GPC6-202ENST00000617456 ANAPC5Q9UJX4 755 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 CAPN6Q9Y6Q1 641 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 AKAP9Q99996 3911 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 PCNX1Q96RV3 2341 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 MED13LQ71F56 2210 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 NAV3Q8IVL0 2385 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 MAGEB16A2A368 324 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 AGPSO00116 658 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 NDC80O14777 642 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 PFDN6O15212 129 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 HCRTR1O43613 425 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 GPC4O75487 556 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 ECDO95905 644 aaPredicted RBP8.18□□□□□ -1.1
GPC6-202ENST00000617456 CTSBP07858 339 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 UMODP07911 640 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 STSP08842 583 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 TPH1P17752 444 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 TSFMP43897 325 aaKnown RBP8.18□□□□□ -1.1
GPC6-202ENST00000617456 ALDH18A1P54886 795 aaKnown RBP8.18□□□□□ -1.1
GPC6-202ENST00000617456 ADARP55265 1226 aaKnown RBP8.18□□□□□ -1.1
GPC6-202ENST00000617456 OLR1P78380 273 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 DCDP81605 110 aaKnown RBP8.18□□□□□ -1.1
GPC6-202ENST00000617456 HPCAP84074 193 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 TMPRSS15P98073 1019 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 PRKG2Q13237 762 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 GNA13Q14344 377 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 ZNF169Q14929 603 aaPredicted RBP8.18□□□□□ -1.1
GPC6-202ENST00000617456 SLC5A12Q1EHB4 618 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 CDONQ4KMG0 1287 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 NKAIN1Q4KMZ8 207 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 FASTKD1Q53R41 847 aaKnown RBP8.18□□□□□ -1.1
GPC6-202ENST00000617456 AGAP7PQ5VUJ5 663 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 IRAK1BP1Q5VVH5 260 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 YOD1Q5VVQ6 348 aaPredicted RBP8.18□□□□□ -1.1
GPC6-202ENST00000617456 PRAMEF13Q5VWM6 474 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 SPESP1Q6UW49 350 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 FAM180AQ6UWF9 173 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 PPP1R21Q6ZMI0 780 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 GDF7Q7Z4P5 450 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 NKAIN4Q8IVV8 208 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 CCDC116Q8IYX3 515 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 SLC22A15Q8IZD6 547 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 CLDN19Q8N6F1 224 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 ZNF655Q8N720 491 aaPredicted RBP8.18□□□□□ -1.1
GPC6-202ENST00000617456 C19orf47Q8N9M1 422 aaKnown RBP8.18□□□□□ -1.1
GPC6-202ENST00000617456 PROKR1Q8TCW9 393 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 PPP4R1Q8TF05 950 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 PTERQ96BW5 349 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 VPS50Q96JG6 964 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 LURAP1Q96LR2 239 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 AGAP4Q96P64 663 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 CIB1Q99828 191 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 FAM118BQ9BPY3 351 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 RAB11FIP5Q9BXF6 653 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 FAM96AQ9H5X1 160 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 MRM3Q9HC36 420 aaKnown RBP8.18□□□□□ -1.1
GPC6-202ENST00000617456 FAM60AQ9NP50 221 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 SLC6A20Q9NP91 592 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 CCDC177Q9NQR7 707 aaPredicted RBP8.18□□□□□ -1.1
GPC6-202ENST00000617456 RAB6BQ9NRW1 208 aa8.18□□□□□ -1.1
GPC6-202ENST00000617456 TXLNGQ9NUQ3 528 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms