RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 RPA3P35244 121 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC3-209ENST00000616395 TTPAP49638 278 aa16.78■□□□□ 0.28
TRAPPC3-209ENST00000616395 TNFSF10P50591 281 aa16.78■□□□□ 0.28
TRAPPC3-209ENST00000616395 CCDC153Q494R4 210 aa16.78■□□□□ 0.28
TRAPPC3-209ENST00000616395 SHISA6Q6ZSJ9 500 aa16.78■□□□□ 0.28
TRAPPC3-209ENST00000616395 AMIGO1Q86WK6 493 aa16.78■□□□□ 0.28
TRAPPC3-209ENST00000616395 CFAP206Q8IYR0 622 aa16.78■□□□□ 0.28
TRAPPC3-209ENST00000616395 ADGRF3Q8IZF5 1079 aa16.78■□□□□ 0.28
TRAPPC3-209ENST00000616395 DTX3LQ8TDB6 740 aa16.78■□□□□ 0.28
TRAPPC3-209ENST00000616395 TCP10LQ8TDR4 215 aa16.78■□□□□ 0.28
TRAPPC3-209ENST00000616395 CKAP2Q8WWK9 683 aa16.78■□□□□ 0.28
TRAPPC3-209ENST00000616395 CDKN2AIPNLQ96HQ2 116 aa16.78■□□□□ 0.28
TRAPPC3-209ENST00000616395 GPR22Q99680 433 aa16.78■□□□□ 0.28
TRAPPC3-209ENST00000616395 VPS11Q9H270 941 aa16.78■□□□□ 0.28
TRAPPC3-209ENST00000616395 SNX15Q9NRS6 342 aa16.78■□□□□ 0.28
TRAPPC3-209ENST00000616395 IRAK4Q9NWZ3 460 aa16.78■□□□□ 0.28
TRAPPC3-209ENST00000616395 SLC2A6Q9UGQ3 507 aa16.78■□□□□ 0.28
TRAPPC3-209ENST00000616395 CRLS1Q9UJA2 301 aa16.78■□□□□ 0.28
TRAPPC3-209ENST00000616395 A0A087X1B8 175 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 TRAV17A0A0B4J275 112 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 SLC19A2O60779 497 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 NDUFS3O75489 264 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 ESRRAP11474 423 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 ITGAXP20702 1163 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 ALAS2P22557 587 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 SLC1A2P43004 574 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 CASP6P55212 293 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 RBPJQ06330 500 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 C3AR1Q16581 482 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 TSNAXIP1Q2TAA8 658 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 FAAH2Q6GMR7 532 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 FAM45BPQ6NSW5 357 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 TLDC1Q6P9B6 456 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 SPESP1Q6UW49 350 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 OVCH1Q7RTY7 1134 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 ZC3HC1Q86WB0 502 aaKnown RBP16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 OR11G2Q8NGC1 345 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 OR52E1Q8NGJ3 308 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 OR13J1Q8NGT2 312 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 FAM45AQ8TCE6 357 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 ADAMTS18Q8TE60 1221 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 ISL2Q96A47 359 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 FKBP10Q96AY3 582 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 SPSB2Q99619 263 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 MESP1Q9BRJ9 268 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 CCM2Q9BSQ5 444 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 TFB2MQ9H5Q4 396 aaKnown RBP16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 SEMA3GQ9NS98 782 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 ABI3Q9P2A4 366 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 TINAGQ9UJW2 476 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 SLC39A10Q9ULF5 831 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 PSAT1Q9Y617 370 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 COMMD10Q9Y6G5 202 aa16.77■□□□□ 0.28
TRAPPC3-209ENST00000616395 FAM95CA0A1B0GW59 222 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 DYTNA2CJ06 578 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 KLHL33A6NCF5 533 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 F8W8V4 182 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 WISP2O76076 250 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 FAM107AO95990 144 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 GOT2P00505 430 aaKnown RBP16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 DRD2P14416 443 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 ITGALP20701 1170 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 CSNK1G2P78368 415 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 ASPHQ12797 758 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 CTBP1Q13363 440 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 RBBP7Q16576 425 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 NKG7Q16617 165 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 ATG16L1Q676U5 607 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 KLC3Q6P597 504 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 TBC1D1Q86TI0 1168 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 CILP2Q8IUL8 1156 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 FAM20CQ8IXL6 584 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 PIANPQ8IYJ0 282 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 ANKS4BQ8N8V4 417 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 GPATCH11Q8N954 259 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 PHC3Q8NDX5 983 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 PPP1R14CQ8TAE6 165 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 RAB3IL1Q8TBN0 382 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 SOX17Q9H6I2 414 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 WDR54Q9H977 334 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 IL1RAPL1Q9NZN1 696 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 ACOT9Q9Y305 439 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 PLLPQ9Y342 182 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 CNTRLQ7Z7A1 2325 aa16.76■□□□□ 0.27
TRAPPC3-209ENST00000616395 A0A096LPK6 155 aa16.75■□□□□ 0.27
TRAPPC3-209ENST00000616395 GOLGA8TH3BQL2 631 aa16.75■□□□□ 0.27
TRAPPC3-209ENST00000616395 H7C0S8 307 aa16.75■□□□□ 0.27
TRAPPC3-209ENST00000616395 BIRC5O15392 142 aa16.75■□□□□ 0.27
TRAPPC3-209ENST00000616395 SGTAO43765 313 aa16.75■□□□□ 0.27
TRAPPC3-209ENST00000616395 F10P00742 488 aa16.75■□□□□ 0.27
TRAPPC3-209ENST00000616395 CRYABP02511 175 aaKnown RBP16.75■□□□□ 0.27
TRAPPC3-209ENST00000616395 AHSGP02765 367 aa16.75■□□□□ 0.27
TRAPPC3-209ENST00000616395 CREB1P16220 341 aa16.75■□□□□ 0.27
TRAPPC3-209ENST00000616395 UGT2B7P16662 529 aa16.75■□□□□ 0.27
TRAPPC3-209ENST00000616395 PSMA3P25788 255 aa16.75■□□□□ 0.27
TRAPPC3-209ENST00000616395 ALDH3A1P30838 453 aa16.75■□□□□ 0.27
TRAPPC3-209ENST00000616395 RAB10P61026 200 aa16.75■□□□□ 0.27
TRAPPC3-209ENST00000616395 PDK4Q16654 411 aa16.75■□□□□ 0.27
TRAPPC3-209ENST00000616395 GKAP1Q5VSY0 366 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC3-209ENST00000616395 MEX3BQ6ZN04 569 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms