RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 STYXQ8WUJ0 223 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 PITX2Q99697 317 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 BTBD10Q9BSF8 475 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 IPPKQ9H8X2 491 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 C1orf109Q9NX04 203 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 RCOR3Q9P2K3 495 aaPredicted RBP12.29□□□□□ -0.44
TCF4-248ENST00000616053 TESMINQ9Y4I5 508 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 D6RAR5 112 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 LGALS8O00214 317 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 HOXA9P31269 272 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 SLC5A3P53794 718 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 E2F1Q01094 437 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 TMEM53Q6P2H8 277 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 GDPD4Q6W3E5 623 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 PLXDC1Q8IUK5 500 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 ZNF619Q8N2I2 560 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 LILRB2Q8N423 598 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 FAM96BQ9Y3D0 163 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 CNTNAP4Q9C0A0 1308 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 C2orf92A0A1B0GVN3 265 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 LCKP06239 509 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 ZNF571Q7Z3V5 609 aaPredicted RBP12.29□□□□□ -0.44
TCF4-248ENST00000616053 RNF175Q8N4F7 328 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 KLHL36Q8N4N3 616 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 DAGLBQ8NCG7 672 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 KIAA0895Q8NCT3 520 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 HM13Q8TCT9 377 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 TSPAN18Q96SJ8 248 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 MUC13Q9H3R2 512 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 ZNF225Q9UK10 706 aa12.29□□□□□ -0.44
TCF4-248ENST00000616053 ABCA5Q8WWZ7 1642 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 C2orf74A8MZ97 194 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 M0QZ24 198 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 VILLO15195 856 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 NDST3O95803 873 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 S1PR1P21453 382 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 TBC1D21Q8IYX1 336 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 RSPRY1Q96DX4 576 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 SAMD11Q96NU1 681 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 PDCD1LG2Q9BQ51 273 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 PAK6Q9NQU5 681 aaPredicted RBP12.28□□□□□ -0.44
TCF4-248ENST00000616053 OR2B3O76000 313 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 GNA12Q03113 381 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 PRKCZQ05513 592 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 CNKSR3Q6P9H4 555 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 MRPL45Q9BRJ2 306 aaKnown RBP12.28□□□□□ -0.44
TCF4-248ENST00000616053 PRODH2Q9UF12 536 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 UTS2RQ9UKP6 389 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 FBXO5Q9UKT4 447 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 TMEM150BA6NC51 233 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 SLC38A8A6NNN8 435 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 E9PAM4 449 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 SERINC3Q13530 473 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 EIF2B1Q14232 305 aaKnown RBP12.28□□□□□ -0.44
TCF4-248ENST00000616053 LRRC37A5PQ49AS3 106 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 PRAMEF14Q5SWL7 426 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 PRAMEF13Q5VWM6 474 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 LIPMQ5VYY2 423 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 PIWIL4Q7Z3Z4 852 aaKnown RBP12.28□□□□□ -0.44
TCF4-248ENST00000616053 SLC30A8Q8IWU4 369 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 C15orf40Q8WUR7 153 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 PYDC1Q8WXC3 89 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 P2RX2Q9UBL9 471 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 FKBPLQ9UIM3 349 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 ATXN7L1Q9ULK2 861 aaPredicted RBP12.28□□□□□ -0.44
TCF4-248ENST00000616053 CHRM5P08912 532 aaPredicted RBP12.28□□□□□ -0.44
TCF4-248ENST00000616053 KDELR1P24390 212 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 NSG1P42857 185 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 CDKAL1Q5VV42 579 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 CRTC1Q6UUV9 634 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 PPM1MQ96MI6 270 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 MAP3K14Q99558 947 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 SLC40A1Q9NP59 571 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 MALT1Q9UDY8 824 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 DNAJC5BQ9UF47 199 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 DDTLA6NHG4 134 aaPredicted RBP12.28□□□□□ -0.44
TCF4-248ENST00000616053 ABLIM1O14639 778 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 DEFA4P12838 97 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 PON3Q15166 354 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 CATSPERGQ6ZRH7 1159 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 MYH14Q7Z406 1995 aaKnown RBP12.28□□□□□ -0.44
TCF4-248ENST00000616053 VSTM2BA6NLU5 285 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 BCKDKO14874 412 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 CHADO15335 359 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 LRRTM2O43300 516 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 DUSP11O75319 330 aaKnown RBP12.28□□□□□ -0.44
TCF4-248ENST00000616053 RCBTB2O95199 551 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 NPBWR1P48145 328 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 CDK3Q00526 305 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 ZFP69Q49AA0 526 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 BAIAP2L2Q6UXY1 529 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 DPH3Q96FX2 82 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 KCNK6Q9Y257 313 aa12.28□□□□□ -0.44
TCF4-248ENST00000616053 SMIM35A0A1B0GVV1 85 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 A0A1W2PPH5 198 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 MAGEB17A8MXT2 336 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 H3BQF6 201 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 INSIG1O15503 277 aa12.27□□□□□ -0.44
TCF4-248ENST00000616053 ZIC2O95409 532 aaPredicted RBP12.27□□□□□ -0.44
TCF4-248ENST00000616053 IGKV5-2P06315 115 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms