RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 PPT2Q9UMR5 302 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 BTRCQ9Y297 605 aa10.97□□□□□ -0.65
SLIRP-212ENST00000613856 PTPN13Q12923 2485 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 IGKV1-8A0A0C4DH67 115 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 OR6C74A6NCV1 312 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 ISM1B1AKI9 464 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 SLC28A1O00337 649 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 FFAR3O14843 346 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 GPR42O15529 346 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 UBXN7O94888 489 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 SERPINA6P08185 405 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 PNLIPP16233 465 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 GLB1P16278 677 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 PRPH2P23942 346 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 GSTM2P28161 218 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 GPR3P46089 330 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 CSNK1G2P78368 415 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 IRX1P78414 480 aaPredicted RBP10.96□□□□□ -0.65
SLIRP-212ENST00000613856 SRSF1Q07955 248 aaKnown RBP eCLIP10.96□□□□□ -0.65
SLIRP-212ENST00000613856 BIRC2Q13490 618 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 ABRAXAS2Q15018 415 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 SF1Q15637 639 aaKnown RBP10.96□□□□□ -0.65
SLIRP-212ENST00000613856 SMU1Q2TAY7 513 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 INAVAQ3KP66 663 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 LSM12Q3MHD2 195 aaKnown RBP10.96□□□□□ -0.65
SLIRP-212ENST00000613856 FAM219BQ5XKK7 198 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 FAM91A1Q658Y4 838 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 ZNF425Q6IV72 752 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 OGFOD2Q6N063 350 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 SPESP1Q6UW49 350 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 LARP4Q71RC2 724 aaKnown RBP eCLIP10.96□□□□□ -0.652e-8■■□□□ 12.5
SLIRP-212ENST00000613856 GBP7Q8N8V2 638 aaPredicted RBP10.96□□□□□ -0.65
SLIRP-212ENST00000613856 OR7G3Q8NG95 312 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 SELENOMQ8WWX9 145 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 CCT6BQ92526 530 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 PRR11Q96HE9 360 aaPredicted RBP10.96□□□□□ -0.65
SLIRP-212ENST00000613856 C3orf30Q96M34 536 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 RILPQ96NA2 401 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 SLC38A3Q99624 504 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 TBC1D10AQ9BXI6 508 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 RAB33BQ9H082 229 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 SPNS1Q9H2V7 528 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 RHBGQ9H310 441 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 WDR55Q9H6Y2 383 aaPredicted RBP10.96□□□□□ -0.65
SLIRP-212ENST00000613856 BRF2Q9HAW0 419 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 MRGBPQ9NV56 204 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 HEY2Q9UBP5 337 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 ADGRE2Q9UHX3 823 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 POMT2Q9UKY4 750 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 ZNF490Q9ULM2 529 aaPredicted RBP10.96□□□□□ -0.65
SLIRP-212ENST00000613856 TRIM33Q9UPN9 1127 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 CLCA2Q9UQC9 943 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 CCL27Q9Y4X3 112 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 PTGDR2Q9Y5Y4 395 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 RNF215Q9Y6U7 377 aa10.96□□□□□ -0.65
SLIRP-212ENST00000613856 PIEZO2Q9H5I5 2752 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 DOPEY2Q9Y3R5 2298 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 RP1P56715 2156 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 GOLGA8QA0A0J9YX86 632 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 A0A0J9YY10 115 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 A0A1W2PNU3 283 aaPredicted RBP10.95□□□□□ -0.66
SLIRP-212ENST00000613856 TRBC2A0A5B9 178 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 GSAPA4D1B5 854 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 PMS2P1A4D2B8 440 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 GOLGA8OA6NCC3 632 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 RHPN2P1A8MT19 583 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 GOLGA8NF8WBI6 632 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 FOXE1O00358 373 aaPredicted RBP10.95□□□□□ -0.66
SLIRP-212ENST00000613856 TRIM38O00635 465 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 RGS14O43566 566 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 SLC28A2O43868 658 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 CCDC22O60826 627 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 RSL1D1O76021 490 aaKnown RBP10.95□□□□□ -0.66
SLIRP-212ENST00000613856 PDYNP01213 254 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 LINC00032P0C843 101 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 POLR2CP19387 275 aaPredicted RBP10.95□□□□□ -0.66
SLIRP-212ENST00000613856 PIK3CBP42338 1070 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 YBX1P67809 324 aaKnown RBP10.95□□□□□ -0.66
SLIRP-212ENST00000613856 PHEXP78562 749 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 GPLD1P80108 840 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 KCNC4Q03721 635 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 RELAQ04206 551 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 NR0B2Q15466 257 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 SPDYAQ5MJ70 313 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 ARMC6Q6NXE6 501 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 C6orf89Q6UWU4 347 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 TMIGD1Q6UXZ0 262 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 Q6ZSR9 355 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 CHSY3Q70JA7 882 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 PAQR7Q86WK9 346 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 ZNF761Q86XN6 746 aaPredicted RBP10.95□□□□□ -0.66
SLIRP-212ENST00000613856 TTLQ8NG68 377 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 OR2T11Q8NH01 316 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 OR10G6Q8NH81 332 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 RSC1A1Q92681 617 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 TUBGCP3Q96CW5 907 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 METTL2AQ96IZ6 378 aaKnown RBP10.95□□□□□ -0.66
SLIRP-212ENST00000613856 PPP1R36Q96LQ0 422 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 PPP3R2Q96LZ3 170 aa10.95□□□□□ -0.66
SLIRP-212ENST00000613856 ACPTQ9BZG2 426 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms