RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 IL7P13232 177 aa21.2■□□□□ 0.98
POLR2J3-220ENST00000613744 DNAJA1P31689 397 aaKnown RBP21.2■□□□□ 0.98
POLR2J3-220ENST00000613744 HTR4Q13639 388 aa21.2■□□□□ 0.98
POLR2J3-220ENST00000613744 OR2T5Q6IEZ7 315 aa21.2■□□□□ 0.98
POLR2J3-220ENST00000613744 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.2■□□□□ 0.98
POLR2J3-220ENST00000613744 LDB1Q86U70 411 aaPredicted RBP21.2■□□□□ 0.98
POLR2J3-220ENST00000613744 TMEM25Q86YD3 366 aa21.2■□□□□ 0.98
POLR2J3-220ENST00000613744 CACTIN-AS1Q8N1I8 211 aa21.2■□□□□ 0.98
POLR2J3-220ENST00000613744 FAM109AQ8N4B1 249 aa21.2■□□□□ 0.98
POLR2J3-220ENST00000613744 RTL3Q8N8U3 475 aaKnown RBP21.2■□□□□ 0.98
POLR2J3-220ENST00000613744 OR2T29Q8NH02 315 aa21.2■□□□□ 0.98
POLR2J3-220ENST00000613744 ELSPBP1Q96BH3 223 aa21.2■□□□□ 0.98
POLR2J3-220ENST00000613744 SLC30A2Q9BRI3 323 aa21.2■□□□□ 0.98
POLR2J3-220ENST00000613744 RIMKLBQ9ULI2 386 aa21.2■□□□□ 0.98
POLR2J3-220ENST00000613744 SNX6Q9UNH7 406 aa21.2■□□□□ 0.98
POLR2J3-220ENST00000613744 IGLV3-10A0A075B6K4 115 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 FADS2P1A8MWK0 482 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 B8ZZF3 427 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 ERVH48-1M5A8F1 160 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 WBP4O75554 376 aaKnown RBP21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 SERPINA1P01009 418 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 PRDX3P30048 256 aaKnown RBP21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 TEKQ02763 1124 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 TARDBPQ13148 414 aaKnown RBP eCLIP21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 PCSK7Q16549 785 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 NXNL2Q5VZ03 156 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 IL31Q6EBC2 164 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 ZDHHC21Q8IVQ6 265 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 YAF2Q8IY57 180 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 ADGRG2Q8IZP9 1017 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 NCLNQ969V3 563 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 COPS4Q9BT78 406 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 GIMAP4Q9NUV9 329 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 STOML2Q9UJZ1 356 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 RHOQP17081 205 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 GDI1P31150 447 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 DGKQP52824 942 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 PPP1R8Q12972 351 aaKnown RBP21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 AAK1Q2M2I8 961 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 MTSS1LQ765P7 747 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 LSM14AQ8ND56 463 aaKnown RBP21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 MARVELD3Q96A59 401 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 ITCHQ96J02 903 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 ACOX2Q99424 681 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 TRAF4Q9BUZ4 470 aaPredicted RBP21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 KCNK12Q9HB15 430 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 ITM2CQ9NQX7 267 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 FKBP14Q9NWM8 211 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 C1orf109Q9NX04 203 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 VNN3Q9NY84 501 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 KCNN3Q9UGI6 736 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 EVLQ9UI08 416 aaPredicted RBP21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 PSORS1C1Q9UIG5 152 aa21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 SAMD4AQ9UPU9 718 aaKnown RBP21.19■□□□□ 0.98
POLR2J3-220ENST00000613744 OTOL1A6NHN0 477 aaPredicted RBP21.18■□□□□ 0.98
POLR2J3-220ENST00000613744 ZSCAN5BA6NJL1 495 aa21.18■□□□□ 0.98
POLR2J3-220ENST00000613744 PLK4O00444 970 aa21.18■□□□□ 0.98
POLR2J3-220ENST00000613744 ARHGAP33O14559 1287 aa21.18■□□□□ 0.98
POLR2J3-220ENST00000613744 IL6P05231 212 aa21.18■□□□□ 0.98
POLR2J3-220ENST00000613744 OR1E1P30953 314 aa21.18■□□□□ 0.98
POLR2J3-220ENST00000613744 KHDRBS1Q07666 443 aaKnown RBP eCLIP21.18■□□□□ 0.98
POLR2J3-220ENST00000613744 MAD2L1Q13257 205 aaPredicted RBP21.18■□□□□ 0.98
POLR2J3-220ENST00000613744 SMN1Q16637 294 aaKnown RBP21.18■□□□□ 0.98
POLR2J3-220ENST00000613744 MAPKAPK3Q16644 382 aa21.18■□□□□ 0.98
POLR2J3-220ENST00000613744 TIMM50Q3ZCQ8 353 aa21.18■□□□□ 0.98
POLR2J3-220ENST00000613744 LY6G5CQ5SRR4 150 aa21.18■□□□□ 0.98
POLR2J3-220ENST00000613744 SCIMPQ6UWF3 145 aa21.18■□□□□ 0.98
POLR2J3-220ENST00000613744 IDO2Q6ZQW0 420 aa21.18■□□□□ 0.98
POLR2J3-220ENST00000613744 KDELC2Q7Z4H8 507 aa21.18■□□□□ 0.98
POLR2J3-220ENST00000613744 NRARPQ7Z6K4 114 aa21.18■□□□□ 0.98
POLR2J3-220ENST00000613744 NKAPQ8N5F7 415 aaKnown RBP21.18■□□□□ 0.98
POLR2J3-220ENST00000613744 SLC7A6Q92536 515 aa21.18■□□□□ 0.98
POLR2J3-220ENST00000613744 FUBP1Q96AE4 644 aaKnown RBP21.18■□□□□ 0.98
POLR2J3-220ENST00000613744 CRELD1Q96HD1 420 aa21.18■□□□□ 0.98
POLR2J3-220ENST00000613744 CEP19Q96LK0 163 aa21.18■□□□□ 0.98
POLR2J3-220ENST00000613744 PPP3R2Q96LZ3 170 aa21.18■□□□□ 0.98
POLR2J3-220ENST00000613744 RHNO1Q9BSD3 238 aa21.18■□□□□ 0.98
POLR2J3-220ENST00000613744 OBP2AQ9NY56 170 aa21.18■□□□□ 0.98
POLR2J3-220ENST00000613744 U3KQV3 271 aa21.18■□□□□ 0.98
POLR2J3-220ENST00000613744 DRGXA6NNA5 263 aa21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 ANHXE9PGG2 379 aa21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 POLR1CO15160 346 aaPredicted RBP21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 TBL1XO60907 577 aa21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 CYP4B1P13584 511 aa21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 ERP29P30040 261 aaKnown RBP21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 SIX5Q8N196 739 aa21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 C12orf10Q9HB07 376 aa21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 TAS2R13Q9NYV9 303 aa21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 FAM50BQ9Y247 325 aa21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 ANKRD12Q6UB98 2062 aa21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 TRBV5-3A0A0A0MS03 114 aa21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 MEIOCA2RUB1 952 aa21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 KRT87PA6NCN2 255 aa21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 NEDD8-MDP1E9PL57 170 aa21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 SHOXO15266 292 aa21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 LDB2O43679 373 aa21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 OR4F21O95013 312 aa21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 LATS1O95835 1130 aa21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 CDK1P06493 297 aa21.17■□□□□ 0.98
POLR2J3-220ENST00000613744 PRKACBP22694 351 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms