RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 TBC1D3BA6NDS4 549 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 PLK4O00444 970 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 UGT2B17O75795 530 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 INHAP05111 366 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 RETP07949 1114 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 PTNP21246 168 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 CCR7P32248 378 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 SSR2P43308 183 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 IHHQ14623 411 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 XKR7Q5GH72 579 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 C22orf39Q6P5X5 142 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 CRTC1Q6UUV9 634 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 CYHR1Q6ZMK1 362 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 CEP68Q76N32 757 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 NAGSQ8N159 534 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 ZNF675Q8TD23 568 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 FCGR1BQ92637 280 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 FOXJ1Q92949 421 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 SLC38A4Q969I6 547 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 POLR2J3Q9H1A7 115 aaKnown RBP6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 RHBGQ9H310 441 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 ZBTB20Q9HC78 741 aaPredicted RBP6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 TIGARQ9NQ88 270 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 RAD18Q9NS91 495 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 GULP1Q9UBP9 304 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 PLAGL1Q9UM63 463 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 MAPRE3Q9UPY8 281 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 TMED5Q9Y3A6 229 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 MYO10Q9HD67 2058 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 ASPDHA6ND91 283 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 QSOX1O00391 747 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 CASKO14936 926 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 SERPINB7O75635 380 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 BCHEP06276 602 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 WASP42768 502 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 CTSOP43234 321 aaPredicted RBP6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 VLDLRP98155 873 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 CBLBQ13191 982 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 CBX2Q14781 532 aaPredicted RBP6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 EXOC3L2Q2M3D2 409 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 CTU2Q2VPK5 515 aaKnown RBP6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 AFMIDQ63HM1 303 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 SHQ1Q6PI26 577 aaKnown RBP6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 OTOP2Q7RTS6 562 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 B3GNT8Q7Z7M8 397 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 PHYKPLQ8IUZ5 450 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 TBC1D19Q8N5T2 526 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 CHST14Q8NCH0 376 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 OR9Q2Q8NGE9 314 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 UBE2E3Q969T4 207 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 ARMC5Q96C12 935 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 TIFAQ96CG3 184 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 MAGEB10Q96LZ2 347 aaPredicted RBP6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 DSN1Q9H410 356 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 CCDC177Q9NQR7 707 aaPredicted RBP6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 IMP3Q9NV31 184 aaKnown RBP6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 KLHL28Q9NXS3 571 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 ZNF221Q9UK13 617 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 GSTK1Q9Y2Q3 226 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 A0A1W2PQ45 241 aaPredicted RBP6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 A0A1W2PQY0 241 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 TCRBV5S2A0A599 114 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 FAM155AB1AL88 458 aaPredicted RBP6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 E7EQ34 232 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 NME6O75414 186 aaPredicted RBP6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 PAICSP22234 425 aaKnown RBP6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 RPL3P39023 403 aaKnown RBP6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 SLC15A1P46059 708 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 SUOXP51687 545 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 OR2B6P58173 313 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 PPIGQ13427 754 aaKnown RBP eCLIP6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 CLEC12AQ5QGZ9 265 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 PLPP4Q5VZY2 271 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 CEACAM20Q6UY09 585 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 GPR149Q86SP6 731 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 RBM23Q86U06 439 aaKnown RBP6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 ANKRD13BQ86YJ7 626 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 C7orf57Q8NEG2 295 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 WBP2Q969T9 261 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 ALPK1Q96QP1 1244 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 ZNF607Q96SK3 696 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 FAM129BQ96TA1 746 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 BARD1Q99728 777 aaKnown RBP6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 P2RY13Q9BPV8 354 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 ERVK13-1Q9NX77 482 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 RNF186Q9NXI6 227 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 CLEC4AQ9UMR7 237 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 SLC9A8Q9Y2E8 581 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 PMF1-BGLAPU3KQ54 211 aa6.63□□□□□ -1.35
SYNPO2-206ENST00000610556 RTCAO00442 366 aaKnown RBP6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 TAPBPO15533 448 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 SLC16A8O95907 504 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 CSF2P04141 144 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 CBSLP0DN79 551 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 ALPPL2P10696 532 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 CBSP35520 551 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 FEN1P39748 380 aaKnown RBP6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 IL12RB1P42701 662 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 RAB25P57735 213 aa6.62□□□□□ -1.35
SYNPO2-206ENST00000610556 GABARAPL2P60520 117 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms