RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	ZBTB14	O43829	449 aa		19.8	■□□□□ 0.76
NECAB3-222	ENST00000607805	ENO3	P13929	434 aa	Predicted RBP	19.8	■□□□□ 0.76
NECAB3-222	ENST00000607805	IL1RN	P18510	177 aa		19.8	■□□□□ 0.76
NECAB3-222	ENST00000607805	AGTR2	P50052	363 aa		19.8	■□□□□ 0.76
NECAB3-222	ENST00000607805	CSNK1G2	P78368	415 aa		19.8	■□□□□ 0.76
NECAB3-222	ENST00000607805	RHAG	Q02094	409 aa		19.8	■□□□□ 0.76
NECAB3-222	ENST00000607805	MEP1A	Q16819	746 aa		19.8	■□□□□ 0.76
NECAB3-222	ENST00000607805	ZNF470	Q6ECI4	717 aa		19.8	■□□□□ 0.76
NECAB3-222	ENST00000607805	DENND6A	Q8IWF6	608 aa		19.8	■□□□□ 0.76
NECAB3-222	ENST00000607805	CHERP	Q8IWX8	916 aa	Known RBP	19.8	■□□□□ 0.76
NECAB3-222	ENST00000607805	ACBD4	Q8NC06	268 aa		19.8	■□□□□ 0.76
NECAB3-222	ENST00000607805	CD200R1	Q8TD46	325 aa		19.8	■□□□□ 0.76
NECAB3-222	ENST00000607805	FRMD6	Q96NE9	622 aa		19.8	■□□□□ 0.76
NECAB3-222	ENST00000607805	KCNK13	Q9HB14	408 aa		19.8	■□□□□ 0.76
NECAB3-222	ENST00000607805	LANCL2	Q9NS86	450 aa		19.8	■□□□□ 0.76
NECAB3-222	ENST00000607805	ABCF3	Q9NUQ8	709 aa		19.8	■□□□□ 0.76
NECAB3-222	ENST00000607805	SH2B3	Q9UQQ2	575 aa		19.8	■□□□□ 0.76
NECAB3-222	ENST00000607805	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	19.79	■□□□□ 0.76
NECAB3-222	ENST00000607805	ZCWPW2	A0A1B0GU75	182 aa		19.79	■□□□□ 0.76
NECAB3-222	ENST00000607805	SGK494	L7N484	410 aa		19.79	■□□□□ 0.76
NECAB3-222	ENST00000607805	LCMT2	O60294	686 aa	Known RBP	19.79	■□□□□ 0.76
NECAB3-222	ENST00000607805	SYF2	O95926	243 aa	Known RBP	19.79	■□□□□ 0.76
NECAB3-222	ENST00000607805	PAM	P19021	973 aa		19.79	■□□□□ 0.76
NECAB3-222	ENST00000607805	KIR3DL1	P43629	444 aa		19.79	■□□□□ 0.76
NECAB3-222	ENST00000607805	CASP6	P55212	293 aa		19.79	■□□□□ 0.76
NECAB3-222	ENST00000607805	CTBP1	Q13363	440 aa		19.79	■□□□□ 0.76
NECAB3-222	ENST00000607805	OR1C1	Q15619	314 aa		19.79	■□□□□ 0.76
NECAB3-222	ENST00000607805	EXT1	Q16394	746 aa		19.79	■□□□□ 0.76
NECAB3-222	ENST00000607805	THEMIS2	Q5TEJ8	643 aa		19.79	■□□□□ 0.76
NECAB3-222	ENST00000607805	ANKRD22	Q5VYY1	191 aa		19.79	■□□□□ 0.76
NECAB3-222	ENST00000607805	SPINK14	Q6IE38	97 aa		19.79	■□□□□ 0.76
NECAB3-222	ENST00000607805	GSTA5	Q7RTV2	222 aa		19.79	■□□□□ 0.76
NECAB3-222	ENST00000607805	KCT2	Q8NC54	265 aa		19.79	■□□□□ 0.76
NECAB3-222	ENST00000607805	MCOLN3	Q8TDD5	553 aa		19.79	■□□□□ 0.76
NECAB3-222	ENST00000607805	CCDC138	Q96M89	665 aa		19.79	■□□□□ 0.76
NECAB3-222	ENST00000607805	UTP23	Q9BRU9	249 aa	Known RBP	19.79	■□□□□ 0.76
NECAB3-222	ENST00000607805	FBXO6	Q9NRD1	293 aa	Predicted RBP	19.79	■□□□□ 0.76
NECAB3-222	ENST00000607805	MEMO1	Q9Y316	297 aa		19.79	■□□□□ 0.76
NECAB3-222	ENST00000607805	NAV3	Q8IVL0	2385 aa		19.78	■□□□□ 0.76
NECAB3-222	ENST00000607805	NIPBL	Q6KC79	2804 aa	eCLIP	19.78	■□□□□ 0.76
NECAB3-222	ENST00000607805	EIF3F	O00303	357 aa	Predicted RBP	19.78	■□□□□ 0.76
NECAB3-222	ENST00000607805	NEURL1	O76050	574 aa		19.78	■□□□□ 0.76
NECAB3-222	ENST00000607805	CLDN14	O95500	239 aa		19.78	■□□□□ 0.76
NECAB3-222	ENST00000607805	FGG	P02679	453 aa		19.78	■□□□□ 0.76
NECAB3-222	ENST00000607805	ST13	P50502	369 aa	Known RBP	19.78	■□□□□ 0.76
NECAB3-222	ENST00000607805	SMS	P52788	366 aa		19.78	■□□□□ 0.76
NECAB3-222	ENST00000607805	TBPL1	P62380	186 aa		19.78	■□□□□ 0.76
NECAB3-222	ENST00000607805	TIAL1	Q01085	375 aa	Known RBP eCLIP	19.78	■□□□□ 0.76
NECAB3-222	ENST00000607805	DHX34	Q14147	1143 aa	Known RBP	19.78	■□□□□ 0.76
NECAB3-222	ENST00000607805	MFSD4B	Q5TF39	518 aa		19.78	■□□□□ 0.76
NECAB3-222	ENST00000607805	PIWIL4	Q7Z3Z4	852 aa	Known RBP	19.78	■□□□□ 0.76
NECAB3-222	ENST00000607805	LGI4	Q8N135	537 aa		19.78	■□□□□ 0.76
NECAB3-222	ENST00000607805	CAMKV	Q8NCB2	501 aa		19.78	■□□□□ 0.76
NECAB3-222	ENST00000607805	MTFMT	Q96DP5	389 aa	Known RBP	19.78	■□□□□ 0.76
NECAB3-222	ENST00000607805	GPR21	Q99679	349 aa		19.78	■□□□□ 0.76
NECAB3-222	ENST00000607805	TRIM51	Q9BSJ1	452 aa		19.78	■□□□□ 0.76
NECAB3-222	ENST00000607805	CCDC177	Q9NQR7	707 aa	Predicted RBP	19.78	■□□□□ 0.76
NECAB3-222	ENST00000607805	KLHL1	Q9NR64	748 aa		19.78	■□□□□ 0.76
NECAB3-222	ENST00000607805	ANKRD10	Q9NXR5	420 aa		19.78	■□□□□ 0.76
NECAB3-222	ENST00000607805	SLC22A7	Q9Y694	548 aa		19.78	■□□□□ 0.76
NECAB3-222	ENST00000607805	RDH16	O75452	317 aa		19.77	■□□□□ 0.76
NECAB3-222	ENST00000607805	ESRRA	P11474	423 aa	Predicted RBP	19.77	■□□□□ 0.76
NECAB3-222	ENST00000607805	EEF1D	P29692	281 aa	Known RBP	19.77	■□□□□ 0.76
NECAB3-222	ENST00000607805	COIL	P38432	576 aa	Predicted RBP	19.77	■□□□□ 0.76
NECAB3-222	ENST00000607805	ALDH6A1	Q02252	535 aa	Known RBP	19.77	■□□□□ 0.76
NECAB3-222	ENST00000607805	USP10	Q14694	798 aa	Known RBP	19.77	■□□□□ 0.76
NECAB3-222	ENST00000607805	TESK1	Q15569	626 aa		19.77	■□□□□ 0.76
NECAB3-222	ENST00000607805	SFT2D3	Q587I9	215 aa		19.77	■□□□□ 0.76
NECAB3-222	ENST00000607805	PAPD4	Q6PIY7	484 aa	Known RBP	19.77	■□□□□ 0.76
NECAB3-222	ENST00000607805	UBE2R2	Q712K3	238 aa	Predicted RBP	19.77	■□□□□ 0.76
NECAB3-222	ENST00000607805	SLC26A11	Q86WA9	606 aa		19.77	■□□□□ 0.76
NECAB3-222	ENST00000607805	AFAP1L2	Q8N4X5	818 aa		19.77	■□□□□ 0.76
NECAB3-222	ENST00000607805	MAIP1	Q8WWC4	291 aa		19.77	■□□□□ 0.76
NECAB3-222	ENST00000607805	ZNF669	Q96BR6	464 aa	Predicted RBP	19.77	■□□□□ 0.76
NECAB3-222	ENST00000607805	MAGED4	Q96JG8	741 aa		19.77	■□□□□ 0.76
NECAB3-222	ENST00000607805	OR1F2P	Q96R84	312 aa		19.77	■□□□□ 0.76
NECAB3-222	ENST00000607805	PCBD2	Q9H0N5	130 aa		19.77	■□□□□ 0.76
NECAB3-222	ENST00000607805	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	19.77	■□□□□ 0.76
NECAB3-222	ENST00000607805	ANKH	Q9HCJ1	492 aa		19.77	■□□□□ 0.76
NECAB3-222	ENST00000607805	MAGEB16	A2A368	324 aa		19.76	■□□□□ 0.75
NECAB3-222	ENST00000607805	CTAGE9	A4FU28	777 aa		19.76	■□□□□ 0.75
NECAB3-222	ENST00000607805	GABRR3	A8MPY1	467 aa		19.76	■□□□□ 0.75
NECAB3-222	ENST00000607805	NPIPA5	E9PKD4	350 aa		19.76	■□□□□ 0.75
NECAB3-222	ENST00000607805	FAM227A	F5H4B4	570 aa		19.76	■□□□□ 0.75
NECAB3-222	ENST00000607805	CDK2AP1	O14519	115 aa		19.76	■□□□□ 0.75
NECAB3-222	ENST00000607805	MLN	P12872	115 aa		19.76	■□□□□ 0.75
NECAB3-222	ENST00000607805	CD46	P15529	392 aa		19.76	■□□□□ 0.75
NECAB3-222	ENST00000607805	IL10	P22301	178 aa		19.76	■□□□□ 0.75
NECAB3-222	ENST00000607805	SLC1A2	P43004	574 aa		19.76	■□□□□ 0.75
NECAB3-222	ENST00000607805	KRTAP10-9	P60411	292 aa		19.76	■□□□□ 0.75
NECAB3-222	ENST00000607805	SARNP	P82979	210 aa	Known RBP	19.76	■□□□□ 0.75
NECAB3-222	ENST00000607805	ABRAXAS2	Q15018	415 aa		19.76	■□□□□ 0.75
NECAB3-222	ENST00000607805	GALNTL5	Q7Z4T8	443 aa		19.76	■□□□□ 0.75
NECAB3-222	ENST00000607805	ZNF227	Q86WZ6	799 aa		19.76	■□□□□ 0.75
NECAB3-222	ENST00000607805	CPNE9	Q8IYJ1	553 aa		19.76	■□□□□ 0.75
NECAB3-222	ENST00000607805	AGGF1	Q8N302	714 aa	eCLIP	19.76	■□□□□ 0.75
NECAB3-222	ENST00000607805	TMEM178A	Q8NBL3	297 aa		19.76	■□□□□ 0.75
NECAB3-222	ENST00000607805	ELP5	Q8TE02	316 aa		19.76	■□□□□ 0.75
NECAB3-222	ENST00000607805	TREX2	Q9BQ50	279 aa	Predicted RBP	19.76	■□□□□ 0.75
NECAB3-222	ENST00000607805	SARG	Q9BW04	601 aa		19.76	■□□□□ 0.75

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms