RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 HIST2H2AA3Q6FI13 130 aa21.91■■□□□ 1.1
IRF3-227ENST00000600911 TRIM46Q7Z4K8 759 aa21.91■■□□□ 1.1
IRF3-227ENST00000600911 SLC41A2Q96JW4 573 aa21.91■■□□□ 1.1
IRF3-227ENST00000600911 MAELQ96JY0 434 aaKnown RBP21.91■■□□□ 1.1
IRF3-227ENST00000600911 ZFYVE21Q9BQ24 234 aa21.91■■□□□ 1.1
IRF3-227ENST00000600911 KLHL31Q9H511 634 aa21.91■■□□□ 1.1
IRF3-227ENST00000600911 SOHLH2Q9NX45 425 aa21.91■■□□□ 1.1
IRF3-227ENST00000600911 KLHL14Q9P2G3 628 aa21.91■■□□□ 1.1
IRF3-227ENST00000600911 H0YGG7 62 aa21.91■■□□□ 1.1
IRF3-227ENST00000600911 SAP18O00422 153 aaKnown RBP21.91■■□□□ 1.1
IRF3-227ENST00000600911 DIAPH2O60879 1101 aa21.91■■□□□ 1.1
IRF3-227ENST00000600911 RFPL3O75679 317 aa21.91■■□□□ 1.1
IRF3-227ENST00000600911 ZBTB11O95625 1053 aaPredicted RBP21.91■■□□□ 1.1
IRF3-227ENST00000600911 FAM107AO95990 144 aa21.91■■□□□ 1.1
IRF3-227ENST00000600911 CXCR2P25025 360 aa21.91■■□□□ 1.1
IRF3-227ENST00000600911 HNRNPH1P31943 449 aaKnown RBP21.91■■□□□ 1.1
IRF3-227ENST00000600911 ARF3P61204 181 aaPredicted RBP21.91■■□□□ 1.1
IRF3-227ENST00000600911 SPIDRQ14159 915 aa21.91■■□□□ 1.1
IRF3-227ENST00000600911 SPATA21Q7Z572 469 aa21.91■■□□□ 1.1
IRF3-227ENST00000600911 FAR2Q96K12 515 aa21.91■■□□□ 1.1
IRF3-227ENST00000600911 MAGEB10Q96LZ2 347 aaPredicted RBP21.91■■□□□ 1.1
IRF3-227ENST00000600911 MS4A8Q9BY19 250 aa21.91■■□□□ 1.1
IRF3-227ENST00000600911 ZNF768Q9H5H4 540 aaKnown RBP21.91■■□□□ 1.1
IRF3-227ENST00000600911 VTI1BQ9UEU0 232 aa21.91■■□□□ 1.1
IRF3-227ENST00000600911 ZFP69BQ9UJL9 534 aa21.91■■□□□ 1.1
IRF3-227ENST00000600911 TSC22D4Q9Y3Q8 395 aa21.91■■□□□ 1.1
IRF3-227ENST00000600911 AP1M2Q9Y6Q5 423 aa21.91■■□□□ 1.1
IRF3-227ENST00000600911 HGSO14964 777 aaPredicted RBP21.9■■□□□ 1.1
IRF3-227ENST00000600911 B3GALT4O96024 378 aa21.9■■□□□ 1.1
IRF3-227ENST00000600911 SERPIND1P05546 499 aa21.9■■□□□ 1.1
IRF3-227ENST00000600911 TROVE2P10155 538 aaKnown RBP eCLIP21.9■■□□□ 1.11e-6■□□□□ 8.4
IRF3-227ENST00000600911 FOLR1P15328 257 aa21.9■■□□□ 1.1
IRF3-227ENST00000600911 MLLT3P42568 568 aaPredicted RBP21.9■■□□□ 1.1
IRF3-227ENST00000600911 RPS15AP62244 130 aaKnown RBP21.9■■□□□ 1.1
IRF3-227ENST00000600911 ZFP36L1Q07352 338 aaKnown RBP21.9■■□□□ 1.1
IRF3-227ENST00000600911 HKDC1Q2TB90 917 aa21.9■■□□□ 1.1
IRF3-227ENST00000600911 RIPOR1Q6ZS17 1223 aa21.9■■□□□ 1.1
IRF3-227ENST00000600911 RNF165Q6ZSG1 346 aa21.9■■□□□ 1.1
IRF3-227ENST00000600911 GLRX5Q86SX6 157 aa21.9■■□□□ 1.1
IRF3-227ENST00000600911 CCT6BQ92526 530 aa21.9■■□□□ 1.1
IRF3-227ENST00000600911 TM4SF19Q96DZ7 209 aa21.9■■□□□ 1.1
IRF3-227ENST00000600911 RNF31Q96EP0 1072 aa21.9■■□□□ 1.1
IRF3-227ENST00000600911 APIPQ96GX9 242 aa21.9■■□□□ 1.1
IRF3-227ENST00000600911 SORBS1Q9BX66 1292 aaKnown RBP21.9■■□□□ 1.1
IRF3-227ENST00000600911 AKTIPQ9H8T0 292 aa21.9■■□□□ 1.1
IRF3-227ENST00000600911 CEP250Q9BV73 2442 aa21.89■■□□□ 1.1
IRF3-227ENST00000600911 SERTM1A2A2V5 107 aa21.89■■□□□ 1.09
IRF3-227ENST00000600911 SLCO1B7G3V0H7 640 aa21.89■■□□□ 1.09
IRF3-227ENST00000600911 MED26O95402 600 aa21.89■■□□□ 1.09
IRF3-227ENST00000600911 NELFEP18615 380 aaKnown RBP21.89■■□□□ 1.09
IRF3-227ENST00000600911 GRK3P35626 688 aa21.89■■□□□ 1.09
IRF3-227ENST00000600911 VSX2P58304 361 aaPredicted RBP21.89■■□□□ 1.09
IRF3-227ENST00000600911 C16orf72Q14CZ0 275 aa21.89■■□□□ 1.09
IRF3-227ENST00000600911 GPR19Q15760 415 aa21.89■■□□□ 1.09
IRF3-227ENST00000600911 LSM12Q3MHD2 195 aaKnown RBP21.89■■□□□ 1.09
IRF3-227ENST00000600911 TMEM198Q66K66 360 aa21.89■■□□□ 1.09
IRF3-227ENST00000600911 DHRS13Q6UX07 377 aa21.89■■□□□ 1.09
IRF3-227ENST00000600911 LARP4Q71RC2 724 aaKnown RBP eCLIP21.89■■□□□ 1.091e-6■■□□□ 13.6
IRF3-227ENST00000600911 MCATQ8IVS2 390 aaKnown RBP21.89■■□□□ 1.09
IRF3-227ENST00000600911 D2HGDHQ8N465 521 aa21.89■■□□□ 1.09
IRF3-227ENST00000600911 DTWD1Q8N5C7 304 aa21.89■■□□□ 1.09
IRF3-227ENST00000600911 KCT2Q8NC54 265 aa21.89■■□□□ 1.09
IRF3-227ENST00000600911 TCTN2Q96GX1 697 aa21.89■■□□□ 1.09
IRF3-227ENST00000600911 SLC45A3Q96JT2 553 aa21.89■■□□□ 1.09
IRF3-227ENST00000600911 F2RL3Q96RI0 385 aa21.89■■□□□ 1.09
IRF3-227ENST00000600911 NSRP1Q9H0G5 558 aaKnown RBP21.89■■□□□ 1.09
IRF3-227ENST00000600911 MRPS2Q9Y399 296 aaKnown RBP21.89■■□□□ 1.09
IRF3-227ENST00000600911 PTPRZ1P23471 2315 aaPredicted RBP21.89■■□□□ 1.09
IRF3-227ENST00000600911 ANKDD1BA6NHY2 528 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 LSM1O15116 133 aaKnown RBP21.88■■□□□ 1.09
IRF3-227ENST00000600911 NDUFS4O43181 175 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 PEX11AO75192 247 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 CHEK2O96017 543 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 PRR35P0CG20 571 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 AHRP35869 848 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 PIK3CBP42338 1070 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 PHF19Q5T6S3 580 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 UBE3DQ7Z6J8 389 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 SHISA5Q8N114 240 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 UBE2E3Q969T4 207 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 MRPL1Q9BYD6 325 aaKnown RBP21.88■■□□□ 1.09
IRF3-227ENST00000600911 PITHD1Q9GZP4 211 aaPredicted RBP21.88■■□□□ 1.09
IRF3-227ENST00000600911 PDE7BQ9NP56 450 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 PSD3Q9NYI0 1048 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 SLC12A4Q9UP95 1085 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 A0A0G2JN53 185 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 H3BMH7 237 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 FOXE1O00358 373 aaPredicted RBP21.88■■□□□ 1.09
IRF3-227ENST00000600911 RTCAO00442 366 aaKnown RBP21.88■■□□□ 1.09
IRF3-227ENST00000600911 EIF2S1P05198 315 aaKnown RBP21.88■■□□□ 1.09
IRF3-227ENST00000600911 ANKRD34CP0C6C1 535 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 ARFIP2P53365 341 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 HSD11B2P80365 405 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 RELAQ04206 551 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 TBL3Q12788 808 aaKnown RBP21.88■■□□□ 1.09
IRF3-227ENST00000600911 ASPGQ86U10 573 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 ALYREFQ86V81 257 aaKnown RBP21.88■■□□□ 1.09
IRF3-227ENST00000600911 AFAP1L2Q8N4X5 818 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 AMER3Q8N944 861 aa21.88■■□□□ 1.09
IRF3-227ENST00000600911 NETO1Q8TDF5 533 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms