RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 CDC16Q13042 620 aa14.95□□□□□ -0.02
RPS28-203ENST00000600659 SSPNQ14714 243 aa14.95□□□□□ -0.02
RPS28-203ENST00000600659 SYT16Q17RD7 645 aa14.95□□□□□ -0.02
RPS28-203ENST00000600659 TECRLQ5HYJ1 363 aa14.95□□□□□ -0.02
RPS28-203ENST00000600659 RHEBL1Q8TAI7 183 aa14.95□□□□□ -0.02
RPS28-203ENST00000600659 STAG3L4Q8TBR4 150 aa14.95□□□□□ -0.02
RPS28-203ENST00000600659 STT3BQ8TCJ2 826 aa14.95□□□□□ -0.02
RPS28-203ENST00000600659 SLC13A3Q8WWT9 602 aa14.95□□□□□ -0.02
RPS28-203ENST00000600659 EXT2Q93063 718 aa14.95□□□□□ -0.02
RPS28-203ENST00000600659 DRC3Q9H069 523 aa14.95□□□□□ -0.02
RPS28-203ENST00000600659 GPRC5BQ9NZH0 403 aa14.95□□□□□ -0.02
RPS28-203ENST00000600659 DYRK1BQ9Y463 629 aa14.95□□□□□ -0.02
RPS28-203ENST00000600659 KCNE2Q9Y6J6 123 aa14.95□□□□□ -0.02
RPS28-203ENST00000600659 EXOC1LA0A1B0GW35 172 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 TRIM49D1C9J1S8 452 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 MASP2O00187 686 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 SOCS6O14544 535 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 OR1F1O43749 312 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 KLK8O60259 260 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 CEACAM4O75871 244 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 NSA2O95478 260 aaKnown RBP14.94□□□□□ -0.02
RPS28-203ENST00000600659 PDGFAP04085 211 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 CD63P08962 238 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 PIM1P11309 404 aaPredicted RBP14.94□□□□□ -0.02
RPS28-203ENST00000600659 IL1RNP18510 177 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 FBLP22087 321 aaKnown RBP14.94□□□□□ -0.02
RPS28-203ENST00000600659 TYK2P29597 1187 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 OTX2P32243 289 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 GRK3P35626 688 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 GLRBP48167 497 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 MAT1AQ00266 395 aaKnown RBP14.94□□□□□ -0.02
RPS28-203ENST00000600659 SLC29A2Q14542 456 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 VWA2Q5GFL6 755 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 ATG9BQ674R7 924 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 ADGRD1Q6QNK2 874 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 SHISA6Q6ZSJ9 500 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 VN1R5Q7Z5H4 357 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 RAB43Q86YS6 212 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 ZC3H7AQ8IWR0 971 aaKnown RBP14.94□□□□□ -0.02
RPS28-203ENST00000600659 CAMKVQ8NCB2 501 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 OR9A4Q8NGU2 314 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 NT5CQ8TCD5 201 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 CREB3L4Q8TEY5 395 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 MZB1Q8WU39 189 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 WDR34Q96EX3 536 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 ABHD17AQ96GS6 310 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 SLC6A16Q9GZN6 736 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 ING2Q9H160 280 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 SLC25A18Q9H1K4 315 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 SOX17Q9H6I2 414 aaPredicted RBP14.94□□□□□ -0.02
RPS28-203ENST00000600659 MLXIPLQ9NP71 852 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 DNAJC11Q9NVH1 559 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 CD274Q9NZQ7 290 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 ZFP69BQ9UJL9 534 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 TLK1Q9UKI8 766 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 HS3ST3B1Q9Y662 390 aa14.94□□□□□ -0.02
RPS28-203ENST00000600659 CCDC189A1A4V9 331 aa14.93□□□□□ -0.02
RPS28-203ENST00000600659 MAP2K7O14733 419 aa14.93□□□□□ -0.02
RPS28-203ENST00000600659 NDUFS4O43181 175 aa14.93□□□□□ -0.02
RPS28-203ENST00000600659 RFPL1O75677 317 aa14.93□□□□□ -0.02
RPS28-203ENST00000600659 STK16O75716 305 aa14.93□□□□□ -0.02
RPS28-203ENST00000600659 ZGLP1P0C6A0 271 aa14.93□□□□□ -0.02
RPS28-203ENST00000600659 C1GALT1C1LP0DN25 315 aa14.93□□□□□ -0.02
RPS28-203ENST00000600659 GNAZP19086 355 aa14.93□□□□□ -0.02
RPS28-203ENST00000600659 NR1D1P20393 614 aa14.93□□□□□ -0.02
RPS28-203ENST00000600659 MMP11P24347 488 aa14.93□□□□□ -0.02
RPS28-203ENST00000600659 AHRP35869 848 aa14.93□□□□□ -0.02
RPS28-203ENST00000600659 MSH2P43246 934 aa14.93□□□□□ -0.02
RPS28-203ENST00000600659 KLC1Q07866 573 aa14.93□□□□□ -0.02
RPS28-203ENST00000600659 PWP1Q13610 501 aa14.93□□□□□ -0.02
RPS28-203ENST00000600659 ACAP2Q15057 778 aa14.93□□□□□ -0.02
RPS28-203ENST00000600659 ADNP2Q6IQ32 1131 aa14.93□□□□□ -0.02
RPS28-203ENST00000600659 LRRC70Q7Z2Q7 622 aa14.93□□□□□ -0.02
RPS28-203ENST00000600659 LAPTM4BQ86VI4 370 aa14.93□□□□□ -0.02
RPS28-203ENST00000600659 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.93□□□□□ -0.02
RPS28-203ENST00000600659 TMEM151AQ8N4L1 468 aa14.93□□□□□ -0.02
RPS28-203ENST00000600659 ZCCHC10Q8TBK6 192 aa14.93□□□□□ -0.02
RPS28-203ENST00000600659 COL26A1Q96A83 441 aa14.93□□□□□ -0.02
RPS28-203ENST00000600659 MMABQ96EY8 250 aaPredicted RBP14.93□□□□□ -0.02
RPS28-203ENST00000600659 CD244Q9BZW8 370 aa14.93□□□□□ -0.02
RPS28-203ENST00000600659 TGIF2Q9GZN2 237 aa14.93□□□□□ -0.02
RPS28-203ENST00000600659 VPS11Q9H270 941 aa14.93□□□□□ -0.02
RPS28-203ENST00000600659 ZNF282Q9UDV7 671 aaPredicted RBP14.93□□□□□ -0.02
RPS28-203ENST00000600659 NXT1Q9UKK6 140 aaKnown RBP14.93□□□□□ -0.02
RPS28-203ENST00000600659 CDC14AQ9UNH5 594 aa14.93□□□□□ -0.02
RPS28-203ENST00000600659 MAP4K5Q9Y4K4 846 aa14.93□□□□□ -0.02
RPS28-203ENST00000600659 SLC22A7Q9Y694 548 aa14.93□□□□□ -0.02
RPS28-203ENST00000600659 LRRC14BA6NHZ5 514 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 SUPT3HB4E1H0 165 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 H0YIG0 161 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 DNAJB6O75190 326 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 SUPT3HO75486 399 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 KRT38O76015 456 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 B3GALT4O96024 378 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 SBK3P0C264 359 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 SLC35G6P0C7Q6 338 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 SMIM10L1P0DMW3 83 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 CNTFP26441 200 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 PCDH1Q08174 1060 aa14.92□□□□□ -0.02
RPS28-203ENST00000600659 SLBPQ14493 270 aaKnown RBP eCLIP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms