RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 GRHL1Q9NZI5 618 aa14.27□□□□□ -0.13
LIG1-215ENST00000597901 CSAG2Q9Y5P2 127 aa14.27□□□□□ -0.13
LIG1-215ENST00000597901 COPG1Q9Y678 874 aaKnown RBP14.27□□□□□ -0.13
LIG1-215ENST00000597901 SLC22A7Q9Y694 548 aa14.27□□□□□ -0.13
LIG1-215ENST00000597901 PCM1Q15154 2024 aa14.27□□□□□ -0.13
LIG1-215ENST00000597901 TRBC2A0A5B9 178 aa14.26□□□□□ -0.13
LIG1-215ENST00000597901 SERPINA7P05543 415 aa14.26□□□□□ -0.13
LIG1-215ENST00000597901 PRR35P0CG20 571 aa14.26□□□□□ -0.13
LIG1-215ENST00000597901 GP1BBP13224 206 aa14.26□□□□□ -0.13
LIG1-215ENST00000597901 IL1RNP18510 177 aa14.26□□□□□ -0.13
LIG1-215ENST00000597901 ILF2Q12905 390 aaKnown RBP14.26□□□□□ -0.13
LIG1-215ENST00000597901 PWP1Q13610 501 aa14.26□□□□□ -0.13
LIG1-215ENST00000597901 EIF2S3LQ2VIR3 472 aaKnown RBP14.26□□□□□ -0.13
LIG1-215ENST00000597901 THOC6Q86W42 341 aaKnown RBP14.26□□□□□ -0.13
LIG1-215ENST00000597901 PDSS2Q86YH6 399 aa14.26□□□□□ -0.13
LIG1-215ENST00000597901 AMER2Q8N7J2 671 aa14.26□□□□□ -0.13
LIG1-215ENST00000597901 ZNF740Q8NDX6 193 aa14.26□□□□□ -0.13
LIG1-215ENST00000597901 CATSPER1Q8NEC5 780 aa14.26□□□□□ -0.13
LIG1-215ENST00000597901 ZCCHC10Q8TBK6 192 aa14.26□□□□□ -0.13
LIG1-215ENST00000597901 PPP4R1Q8TF05 950 aa14.26□□□□□ -0.13
LIG1-215ENST00000597901 SLC5A11Q8WWX8 675 aa14.26□□□□□ -0.13
LIG1-215ENST00000597901 METTL21AQ8WXB1 218 aa14.26□□□□□ -0.13
LIG1-215ENST00000597901 NEIL2Q969S2 332 aa14.26□□□□□ -0.13
LIG1-215ENST00000597901 MOCOSQ96EN8 888 aa14.26□□□□□ -0.13
LIG1-215ENST00000597901 IMMP1LQ96LU5 166 aa14.26□□□□□ -0.13
LIG1-215ENST00000597901 SLC29A3Q9BZD2 475 aa14.26□□□□□ -0.13
LIG1-215ENST00000597901 ZNF700Q9H0M5 742 aa14.26□□□□□ -0.13
LIG1-215ENST00000597901 LRRC4CQ9HCJ2 640 aa14.26□□□□□ -0.13
LIG1-215ENST00000597901 GPAMQ9HCL2 828 aa14.26□□□□□ -0.13
LIG1-215ENST00000597901 CTNNAL1Q9UBT7 734 aa14.26□□□□□ -0.13
LIG1-215ENST00000597901 SLC22A14Q9Y267 594 aa14.26□□□□□ -0.13
LIG1-215ENST00000597901 PCDHGA10Q9Y5H3 936 aa14.26□□□□□ -0.13
LIG1-215ENST00000597901 NPEPPSL1A6NEC2 478 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 OR2W5A6NFC9 320 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 WFS1O76024 890 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 AGFG2O95081 481 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 CBX6O95503 412 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 SLC35G6P0C7Q6 338 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 C8orf89P0DMQ9 161 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 ICAM2P13598 275 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 XCR1P46094 333 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 SLC12A2P55011 1212 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 PLTPP55058 493 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 CDKL1Q00532 357 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 POU4F1Q01851 419 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 MFAP5Q13361 173 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 MRPL49Q13405 166 aaKnown RBP14.25□□□□□ -0.13
LIG1-215ENST00000597901 PCOLCEQ15113 449 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 TRADDQ15628 312 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 TBC1D19Q8N5T2 526 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 CDKL2Q92772 493 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 BARD1Q99728 777 aaKnown RBP14.25□□□□□ -0.13
LIG1-215ENST00000597901 VN1R1Q9GZP7 353 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 SPNS1Q9H2V7 528 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 EPS8L2Q9H6S3 715 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 POPDC3Q9HBV1 291 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 HCN3Q9P1Z3 774 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 PTGFRNQ9P2B2 879 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 UTP11Q9Y3A2 253 aaKnown RBP14.25□□□□□ -0.13
LIG1-215ENST00000597901 NAALAD2Q9Y3Q0 740 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 DYRK1BQ9Y463 629 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 OARD1Q9Y530 152 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 KCNE2Q9Y6J6 123 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 ANKRD12Q6UB98 2062 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 NBASA2RRP1 2371 aa14.25□□□□□ -0.13
LIG1-215ENST00000597901 TCRBV9S1A1TA0A576 114 aa14.24□□□□□ -0.13
LIG1-215ENST00000597901 CYSRT1A8MQ03 144 aa14.24□□□□□ -0.13
LIG1-215ENST00000597901 DNAJB6O75190 326 aa14.24□□□□□ -0.13
LIG1-215ENST00000597901 SERPIND1P05546 499 aa14.24□□□□□ -0.13
LIG1-215ENST00000597901 CELA2AP08217 269 aa14.24□□□□□ -0.13
LIG1-215ENST00000597901 SCTRP47872 440 aa14.24□□□□□ -0.13
LIG1-215ENST00000597901 HNMTP50135 292 aa14.24□□□□□ -0.13
LIG1-215ENST00000597901 GPX6P59796 221 aa14.24□□□□□ -0.13
LIG1-215ENST00000597901 CAV1Q03135 178 aa14.24□□□□□ -0.13
LIG1-215ENST00000597901 USP10Q14694 798 aaKnown RBP14.24□□□□□ -0.13
LIG1-215ENST00000597901 TLR1Q15399 786 aa14.24□□□□□ -0.13
LIG1-215ENST00000597901 TSNQ15631 228 aaKnown RBP14.24□□□□□ -0.13
LIG1-215ENST00000597901 MINDY4Q4G0A6 757 aa14.24□□□□□ -0.13
LIG1-215ENST00000597901 MFSD4BQ5TF39 518 aa14.24□□□□□ -0.13
LIG1-215ENST00000597901 NXPE4Q6UWF7 544 aa14.24□□□□□ -0.13
LIG1-215ENST00000597901 SPATA6LQ8N4H0 392 aa14.24□□□□□ -0.13
LIG1-215ENST00000597901 AFAP1L2Q8N4X5 818 aa14.24□□□□□ -0.13
LIG1-215ENST00000597901 BRIX1Q8TDN6 353 aaKnown RBP14.24□□□□□ -0.13
LIG1-215ENST00000597901 TSNARE1Q96NA8 513 aa14.24□□□□□ -0.13
LIG1-215ENST00000597901 PSMG3-AS1Q96PY0 264 aa14.24□□□□□ -0.13
LIG1-215ENST00000597901 CPNE1Q99829 537 aa14.24□□□□□ -0.13
LIG1-215ENST00000597901 EGFL8Q99944 293 aa14.24□□□□□ -0.13
LIG1-215ENST00000597901 TUBB6Q9BUF5 446 aa14.24□□□□□ -0.13
LIG1-215ENST00000597901 CAB39LQ9H9S4 337 aa14.24□□□□□ -0.13
LIG1-215ENST00000597901 RIC8BQ9NVN3 520 aa14.24□□□□□ -0.13
LIG1-215ENST00000597901 PLA2G3Q9NZ20 509 aa14.24□□□□□ -0.13
LIG1-215ENST00000597901 TXNDC16Q9P2K2 825 aa14.24□□□□□ -0.13
LIG1-215ENST00000597901 ZFP69BQ9UJL9 534 aa14.24□□□□□ -0.13
LIG1-215ENST00000597901 NTNG1Q9Y2I2 539 aa14.24□□□□□ -0.13
LIG1-215ENST00000597901 IGHV3-20A0A0C4DH32 117 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 CTAGE15A4D2H0 777 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 FAM159BA6NKW6 160 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 NDUFS4O43181 175 aa14.23□□□□□ -0.13
LIG1-215ENST00000597901 GALR3O60755 368 aaPredicted RBP14.23□□□□□ -0.13
LIG1-215ENST00000597901 H2AFYO75367 372 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms