RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 VWA2Q5GFL6 755 aa16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 GRTP1Q5TC63 336 aa16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 LAPTM4BQ86VI4 370 aa16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 RELL1Q8IUW5 271 aa16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 OR1N1Q8NGS0 311 aa16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 FBF1Q8TES7 1133 aa16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 HAS2Q92819 552 aa16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 RELTQ969Z4 430 aa16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 C8orf44Q96CB5 159 aa16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 CCDC138Q96M89 665 aa16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 OLFM1Q99784 485 aa16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 DPH7Q9BTV6 452 aa16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 SMYD2Q9NRG4 433 aa16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 C14orf105Q9NVL8 296 aa16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 CELSR2Q9HCU4 2923 aa16.65■□□□□ 0.26
SHKBP1-203ENST00000594298 TRAV17A0A0B4J275 112 aa16.65■□□□□ 0.26
SHKBP1-203ENST00000594298 H0YGG7 62 aa16.65■□□□□ 0.26
SHKBP1-203ENST00000594298 JRKO75564 520 aa16.65■□□□□ 0.26
SHKBP1-203ENST00000594298 SERPINA7P05543 415 aa16.65■□□□□ 0.26
SHKBP1-203ENST00000594298 TNFSF10P50591 281 aa16.65■□□□□ 0.26
SHKBP1-203ENST00000594298 TDGF1P3P51864 188 aa16.65■□□□□ 0.26
SHKBP1-203ENST00000594298 EMP2P54851 167 aa16.65■□□□□ 0.26
SHKBP1-203ENST00000594298 TAS2R39P59534 338 aa16.65■□□□□ 0.26
SHKBP1-203ENST00000594298 ARF3P61204 181 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-203ENST00000594298 YBX1P67809 324 aaKnown RBP16.65■□□□□ 0.26
SHKBP1-203ENST00000594298 PRSS58Q8IYP2 241 aa16.65■□□□□ 0.26
SHKBP1-203ENST00000594298 PPM1NQ8N819 430 aa16.65■□□□□ 0.26
SHKBP1-203ENST00000594298 ANKRD7Q92527 254 aa16.65■□□□□ 0.26
SHKBP1-203ENST00000594298 CABS1Q96KC9 395 aa16.65■□□□□ 0.26
SHKBP1-203ENST00000594298 RBBP8Q99708 897 aa16.65■□□□□ 0.26
SHKBP1-203ENST00000594298 PLCD4Q9BRC7 762 aa16.65■□□□□ 0.26
SHKBP1-203ENST00000594298 TGIF2Q9GZN2 237 aa16.65■□□□□ 0.26
SHKBP1-203ENST00000594298 UTP6Q9NYH9 597 aaKnown RBP16.65■□□□□ 0.26
SHKBP1-203ENST00000594298 STOX2Q9P2F5 926 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-203ENST00000594298 CACNA1DQ01668 2161 aa16.65■□□□□ 0.26
SHKBP1-203ENST00000594298 CREBBPQ92793 2442 aa16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 LOC102723996A0A087X1L8 192 aa16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 IGHV1-45A0A0A0MS14 117 aa16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 CXorf49A8MYA2 514 aaPredicted RBP16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 IDSB3KWA1 339 aa16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 BMP10O95393 424 aa16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 SLC16A8O95907 504 aa16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 ENO2P09104 434 aaPredicted RBP16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 CXCR2P25025 360 aa16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 SLC26A3P40879 764 aa16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 ABATP80404 500 aa16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 TSTA3Q13630 321 aaPredicted RBP16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 USP10Q14694 798 aaKnown RBP16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 KBTBD12Q3ZCT8 623 aa16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 GARNL3Q5VVW2 1013 aa16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 RIPOR1Q6ZS17 1223 aa16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 ARHGEF39Q8N4T4 335 aa16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 BRIX1Q8TDN6 353 aaKnown RBP16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 ZNF480Q8WV37 535 aa16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 NR4A3Q92570 626 aa16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 MARVELD3Q96A59 401 aa16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 TAAR6Q96RI8 345 aa16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 CYTH2Q99418 400 aa16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 MCMBPQ9BTE3 642 aa16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 GPAMQ9HCL2 828 aa16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 RIC8BQ9NVN3 520 aa16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 PTGFRNQ9P2B2 879 aa16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 MRPS2Q9Y399 296 aaKnown RBP16.64■□□□□ 0.25
SHKBP1-203ENST00000594298 CROCCQ5TZA2 2017 aa16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 IGKV1-8A0A0C4DH67 115 aa16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 E7ENX8 843 aa16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 TSPAN12O95859 305 aa16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 STMN1P16949 149 aa16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 ZNF37AP17032 561 aaPredicted RBP16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 AP1S2P56377 157 aa16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 TAP2Q03519 686 aa16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 RELAQ04206 551 aa16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 SLMAPQ14BN4 828 aa16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 SP5Q6BEB4 398 aaPredicted RBP16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 ZNF425Q6IV72 752 aa16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 FJX1Q86VR8 437 aa16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 PAQR7Q86WK9 346 aa16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 CSNK1A1LQ8N752 337 aa16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 AMER3Q8N944 861 aa16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 ATL1Q8WXF7 558 aa16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 OR2A5Q96R48 311 aa16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 GPR22Q99680 433 aa16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 ACAT2Q9BWD1 397 aa16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 RNF32Q9H0A6 362 aa16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 PCBD2Q9H0N5 130 aa16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 SYNPO2LQ9H987 977 aa16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 MRPS30Q9NP92 439 aaKnown RBP16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 MKKSQ9NPJ1 570 aaPredicted RBP16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 TRPC4Q9UBN4 977 aa16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 ADAMTS6Q9UKP5 1117 aa16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 PDE10AQ9Y233 779 aa16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 RUVBL1Q9Y265 456 aaKnown RBP16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 MTO1Q9Y2Z2 717 aaKnown RBP16.63■□□□□ 0.25
SHKBP1-203ENST00000594298 DOCK10Q96BY6 2186 aa16.62■□□□□ 0.25
SHKBP1-203ENST00000594298 PIAS1O75925 651 aa16.62■□□□□ 0.25
SHKBP1-203ENST00000594298 PRF1P14222 555 aa16.62■□□□□ 0.25
SHKBP1-203ENST00000594298 CCND1P24385 295 aa16.62■□□□□ 0.25
SHKBP1-203ENST00000594298 AP2B1P63010 937 aa16.62■□□□□ 0.25
SHKBP1-203ENST00000594298 PRDX1Q06830 199 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-203ENST00000594298 THEMIS2Q5TEJ8 643 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms