RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 VWA2Q5GFL6 755 aa10.95□□□□□ -0.66
VMP1-211ENST00000591315 TECRLQ5HYJ1 363 aa10.95□□□□□ -0.66
VMP1-211ENST00000591315 YOD1Q5VVQ6 348 aaPredicted RBP10.95□□□□□ -0.66
VMP1-211ENST00000591315 BORAQ6PGQ7 559 aa10.95□□□□□ -0.66
VMP1-211ENST00000591315 ADGRD1Q6QNK2 874 aa10.95□□□□□ -0.66
VMP1-211ENST00000591315 PPP1R32Q7Z5V6 425 aa10.95□□□□□ -0.66
VMP1-211ENST00000591315 ASPGQ86U10 573 aa10.95□□□□□ -0.66
VMP1-211ENST00000591315 LAPTM4BQ86VI4 370 aa10.95□□□□□ -0.66
VMP1-211ENST00000591315 PDSS2Q86YH6 399 aa10.95□□□□□ -0.66
VMP1-211ENST00000591315 CYP4X1Q8N118 509 aa10.95□□□□□ -0.66
VMP1-211ENST00000591315 AMER3Q8N944 861 aa10.95□□□□□ -0.66
VMP1-211ENST00000591315 OR2W6PQ8NHA6 318 aa10.95□□□□□ -0.66
VMP1-211ENST00000591315 UBLCP1Q8WVY7 318 aaPredicted RBP10.95□□□□□ -0.66
VMP1-211ENST00000591315 SLC13A3Q8WWT9 602 aa10.95□□□□□ -0.66
VMP1-211ENST00000591315 SPSB2Q99619 263 aa10.95□□□□□ -0.66
VMP1-211ENST00000591315 KLHL31Q9H511 634 aa10.95□□□□□ -0.66
VMP1-211ENST00000591315 PELI2Q9HAT8 420 aa10.95□□□□□ -0.66
VMP1-211ENST00000591315 ZNF304Q9HCX3 659 aa10.95□□□□□ -0.66
VMP1-211ENST00000591315 ACSS2Q9NR19 701 aa10.95□□□□□ -0.66
VMP1-211ENST00000591315 DNAJC11Q9NVH1 559 aa10.95□□□□□ -0.66
VMP1-211ENST00000591315 CPSF2Q9P2I0 782 aaKnown RBP10.95□□□□□ -0.66
VMP1-211ENST00000591315 TBK1Q9UHD2 729 aa10.95□□□□□ -0.66
VMP1-211ENST00000591315 ZNF180Q9UJW8 692 aa10.95□□□□□ -0.66
VMP1-211ENST00000591315 KCNMB2Q9Y691 235 aa10.95□□□□□ -0.66
VMP1-211ENST00000591315 KCNE2Q9Y6J6 123 aa10.95□□□□□ -0.66
VMP1-211ENST00000591315 A0A1W2PPM1 405 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 OR2W5A6NFC9 320 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 SMIM23A6NLE4 172 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 VSTM2BA6NLU5 285 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 GOLGA8RI6L899 631 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 ALOX12BO75342 701 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 JRKO75564 520 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 STK16O75716 305 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 KRT38O76015 456 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 SIX3O95343 332 aaPredicted RBP10.94□□□□□ -0.66
VMP1-211ENST00000591315 S100BP04271 92 aaPredicted RBP10.94□□□□□ -0.66
VMP1-211ENST00000591315 SBK3P0C264 359 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 C1GALT1C1LP0DN25 315 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 NR1D1P20393 614 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 FBLP22087 321 aaKnown RBP10.94□□□□□ -0.66
VMP1-211ENST00000591315 DEKP35659 375 aaKnown RBP10.94□□□□□ -0.66
VMP1-211ENST00000591315 HSD17B3P37058 310 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 POLE2P56282 527 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 HYAL2Q12891 473 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 DOC2AQ14183 400 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 SLBPQ14493 270 aaKnown RBP eCLIP10.94□□□□□ -0.66
VMP1-211ENST00000591315 ACAP2Q15057 778 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 PFKFB4Q16877 469 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 FAM83EQ2M2I3 478 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 CRTC2Q53ET0 693 aaPredicted RBP10.94□□□□□ -0.66
VMP1-211ENST00000591315 COLEC12Q5KU26 742 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 TMEM214Q6NUQ4 689 aaKnown RBP10.94□□□□□ -0.66
VMP1-211ENST00000591315 VN1R5Q7Z5H4 357 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.94□□□□□ -0.66
VMP1-211ENST00000591315 TCAIMQ8N3R3 496 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 TMEM151AQ8N4L1 468 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 EIF1ADQ8N9N8 165 aaKnown RBP10.94□□□□□ -0.66
VMP1-211ENST00000591315 OR5T3Q8NGG3 340 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 OR2Y1Q8NGV0 311 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 STT3BQ8TCJ2 826 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 MZB1Q8WU39 189 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 THAP11Q96EK4 314 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 MMABQ96EY8 250 aaPredicted RBP10.94□□□□□ -0.66
VMP1-211ENST00000591315 SCYL1Q96KG9 808 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 ARHGAP9Q9BRR9 750 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 SARGQ9BW04 601 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 YIPF2Q9BWQ6 316 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 CD244Q9BZW8 370 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 DRC3Q9H069 523 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 HCN3Q9P1Z3 774 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 TRPC4Q9UBN4 977 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 ZNF490Q9ULM2 529 aaPredicted RBP10.94□□□□□ -0.66
VMP1-211ENST00000591315 POLHQ9Y253 713 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 MAN2B2Q9Y2E5 1009 aa10.94□□□□□ -0.66
VMP1-211ENST00000591315 A0A0G2JN53 185 aa10.93□□□□□ -0.66
VMP1-211ENST00000591315 TK2O00142 265 aa10.93□□□□□ -0.66
VMP1-211ENST00000591315 NDUFS4O43181 175 aa10.93□□□□□ -0.66
VMP1-211ENST00000591315 RDH16O75452 317 aa10.93□□□□□ -0.66
VMP1-211ENST00000591315 TBX6O95947 436 aaPredicted RBP10.93□□□□□ -0.66
VMP1-211ENST00000591315 ZNF888P0CJ79 500 aaPredicted RBP10.93□□□□□ -0.66
VMP1-211ENST00000591315 GNAZP19086 355 aa10.93□□□□□ -0.66
VMP1-211ENST00000591315 GRK3P35626 688 aa10.93□□□□□ -0.66
VMP1-211ENST00000591315 FOLR3P41439 243 aa10.93□□□□□ -0.66
VMP1-211ENST00000591315 CCR10P46092 362 aa10.93□□□□□ -0.66
VMP1-211ENST00000591315 EMP3P54852 163 aa10.93□□□□□ -0.66
VMP1-211ENST00000591315 RAB8AP61006 207 aa10.93□□□□□ -0.66
VMP1-211ENST00000591315 OLR1P78380 273 aa10.93□□□□□ -0.66
VMP1-211ENST00000591315 SETDB1Q15047 1291 aa10.93□□□□□ -0.66
VMP1-211ENST00000591315 PDK4Q16654 411 aa10.93□□□□□ -0.66
VMP1-211ENST00000591315 XKR6Q5GH73 641 aa10.93□□□□□ -0.66
VMP1-211ENST00000591315 CDKL4Q5MAI5 379 aa10.93□□□□□ -0.66
VMP1-211ENST00000591315 GARNL3Q5VVW2 1013 aa10.93□□□□□ -0.66
VMP1-211ENST00000591315 ATG9BQ674R7 924 aa10.93□□□□□ -0.66
VMP1-211ENST00000591315 TIFABQ6ZNK6 161 aa10.93□□□□□ -0.66
VMP1-211ENST00000591315 RPS27LQ71UM5 84 aaKnown RBP10.93□□□□□ -0.66
VMP1-211ENST00000591315 TAOK1Q7L7X3 1001 aa10.93□□□□□ -0.66
VMP1-211ENST00000591315 MRGPREQ86SM8 312 aa10.93□□□□□ -0.66
VMP1-211ENST00000591315 RNF175Q8N4F7 328 aa10.93□□□□□ -0.66
VMP1-211ENST00000591315 TEX9Q8N6V9 391 aa10.93□□□□□ -0.66
VMP1-211ENST00000591315 PTGR2Q8N8N7 351 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms