RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 TAS2R50P59544 299 aa13.18□□□□□ -0.3
VMP1-209ENST00000588915 CSNK1G2P78368 415 aa13.18□□□□□ -0.3
VMP1-209ENST00000588915 PMP22Q01453 160 aa13.18□□□□□ -0.3
VMP1-209ENST00000588915 MEF2AQ02078 507 aaPredicted RBP13.18□□□□□ -0.3
VMP1-209ENST00000588915 ACTN3Q08043 901 aaPredicted RBP13.18□□□□□ -0.3
VMP1-209ENST00000588915 DHX34Q14147 1143 aaKnown RBP13.18□□□□□ -0.3
VMP1-209ENST00000588915 OR1C1Q15619 314 aa13.18□□□□□ -0.3
VMP1-209ENST00000588915 UBE2R2Q712K3 238 aaPredicted RBP13.18□□□□□ -0.3
VMP1-209ENST00000588915 CRLF3Q8IUI8 442 aa13.18□□□□□ -0.3
VMP1-209ENST00000588915 ZNF295-AS1Q8N0V1 137 aa13.18□□□□□ -0.3
VMP1-209ENST00000588915 GIMAP7Q8NHV1 300 aa13.18□□□□□ -0.3
VMP1-209ENST00000588915 PHF10Q8WUB8 498 aaKnown RBP13.18□□□□□ -0.3
VMP1-209ENST00000588915 SIGLEC12Q96PQ1 595 aa13.18□□□□□ -0.3
VMP1-209ENST00000588915 SARGQ9BW04 601 aa13.18□□□□□ -0.3
VMP1-209ENST00000588915 IGSF5Q9NSI5 407 aa13.18□□□□□ -0.3
VMP1-209ENST00000588915 SAMD15Q9P1V8 674 aa13.18□□□□□ -0.3
VMP1-209ENST00000588915 MEMO1Q9Y316 297 aa13.18□□□□□ -0.3
VMP1-209ENST00000588915 SDR42E2A6NKP2 422 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 MAGEB17A8MXT2 336 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 ASNA1O43681 348 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 WISP2O76076 250 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 FGGP02679 453 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 IL1RNP18510 177 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 KCNJ1P48048 391 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 SKP1P63208 163 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 MPP1Q00013 466 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 RHAGQ02094 409 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 HERC3Q15034 1050 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 NSDHLQ15738 373 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 ZNF470Q6ECI4 717 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 SPINK14Q6IE38 97 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 SLC25A25Q6KCM7 469 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 UGT3A1Q6NUS8 523 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 CASC4Q6P4E1 433 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 PAPD4Q6PIY7 484 aaKnown RBP13.17□□□□□ -0.3
VMP1-209ENST00000588915 PRSS41Q7RTY9 318 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 ASPGQ86U10 573 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 CAND1Q86VP6 1230 aaKnown RBP13.17□□□□□ -0.3
VMP1-209ENST00000588915 C17orf64Q86WR6 236 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 SIAH3Q8IW03 269 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 GHDCQ8N2G8 530 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 AMER2Q8N7J2 671 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 CALML6Q8TD86 181 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 SLC13A3Q8WWT9 602 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 FRMD6Q96NE9 622 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 NPAS2Q99743 824 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 CLK4Q9HAZ1 481 aaKnown RBP13.17□□□□□ -0.3
VMP1-209ENST00000588915 XAB2Q9HCS7 855 aaKnown RBP13.17□□□□□ -0.3
VMP1-209ENST00000588915 ABCF3Q9NUQ8 709 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 TINAGQ9UJW2 476 aa13.17□□□□□ -0.3
VMP1-209ENST00000588915 C2CD3Q4AC94 2353 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 ZCWPW2A0A1B0GU75 182 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 GABRR3A8MPY1 467 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 E9PLN8 166 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 FAM227AF5H4B4 570 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 SGK494L7N484 410 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 AVILO75366 819 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 NEURL1O76050 574 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 C8GP07360 202 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 SP1P08047 785 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 SLC35G6P0C7Q6 338 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 TBPL1P62380 186 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 SNRPNP63162 240 aaKnown RBP13.16□□□□□ -0.3
VMP1-209ENST00000588915 SRSF11Q05519 484 aaKnown RBP13.16□□□□□ -0.3
VMP1-209ENST00000588915 CTBP1Q13363 440 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 CUL1Q13616 776 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 USP10Q14694 798 aaKnown RBP13.16□□□□□ -0.3
VMP1-209ENST00000588915 SFT2D3Q587I9 215 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 FCRLBQ6BAA4 426 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 CAPN13Q6MZZ7 669 aaPredicted RBP13.16□□□□□ -0.3
VMP1-209ENST00000588915 ZNF549Q6P9A3 640 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 LCTLQ6UWM7 567 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 ZNF662Q6ZS27 426 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 RPS19BP1Q86WX3 136 aaKnown RBP13.16□□□□□ -0.3
VMP1-209ENST00000588915 DENND6AQ8IWF6 608 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 ACBD4Q8NC06 268 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 KCT2Q8NC54 265 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 MCUQ8NE86 351 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 CD200R1Q8TD46 325 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 ELP5Q8TE02 316 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 GPR21Q99679 349 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 OLFM1Q99784 485 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 VKORC1Q9BQB6 163 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 ENKD1Q9H0I2 346 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 RBSNQ9H1K0 784 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 TRIM45Q9H8W5 580 aaPredicted RBP13.16□□□□□ -0.3
VMP1-209ENST00000588915 KLHL1Q9NR64 748 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 FBXO6Q9NRD1 293 aaPredicted RBP13.16□□□□□ -0.3
VMP1-209ENST00000588915 LANCL2Q9NS86 450 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 HCN3Q9P1Z3 774 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 LRFN1Q9P244 771 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 DCHS2Q6V1P9 2916 aa13.16□□□□□ -0.3
VMP1-209ENST00000588915 AKAP9Q99996 3911 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 GTF3C1Q12789 2109 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 TACC2O95359 2948 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 NPIPA5E9PKD4 350 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 SLC16A5O15375 505 aa13.15□□□□□ -0.3
VMP1-209ENST00000588915 LCMT2O60294 686 aaKnown RBP13.15□□□□□ -0.3
VMP1-209ENST00000588915 SNRPB2P08579 225 aaKnown RBP13.15□□□□□ -0.3
VMP1-209ENST00000588915 ABOP16442 354 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms