RNA–Protein interactions for RNA: ENST00000587563.5

RPRD1A-205, Transcript of regulation of nuclear pre-mRNA domain containing 1A, human

TSL 3

Gene RPRD1A, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPRD1A-205	ENST00000587563	POLR1B	Q9H9Y6	1135 aa		4.61	□□□□□ -1.67
RPRD1A-205	ENST00000587563	PDF	Q9HBH1	243 aa		4.61	□□□□□ -1.67
RPRD1A-205	ENST00000587563	FGF22	Q9HCT0	170 aa		4.61	□□□□□ -1.67
RPRD1A-205	ENST00000587563	DYRK4	Q9NR20	520 aa		4.61	□□□□□ -1.67
RPRD1A-205	ENST00000587563	SMARCAL1	Q9NZC9	954 aa		4.61	□□□□□ -1.67
RPRD1A-205	ENST00000587563	UBA2	Q9UBT2	640 aa	Predicted RBP	4.61	□□□□□ -1.67
RPRD1A-205	ENST00000587563	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
RPRD1A-205	ENST00000587563	APOBEC3B	Q9UH17	382 aa	Known RBP	4.61	□□□□□ -1.67
RPRD1A-205	ENST00000587563	R3HDM2	Q9Y2K5	976 aa	Known RBP	4.61	□□□□□ -1.67
RPRD1A-205	ENST00000587563	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	4.61	□□□□□ -1.67
RPRD1A-205	ENST00000587563	SAR1B	Q9Y6B6	198 aa		4.61	□□□□□ -1.67
RPRD1A-205	ENST00000587563	NBAS	A2RRP1	2371 aa		4.61	□□□□□ -1.67
RPRD1A-205	ENST00000587563		A0A087WV62	115 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	CDRT15L2	A8MXV6	281 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	HACD1	B0YJ81	288 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	LMO7DN	F2Z398	122 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	POC1B-GALNT4	F8VUJ3	575 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563		H3BNX3	289 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563		H7C1Q1	480 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	KCNK1	O00180	336 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	PGRMC1	O00264	195 aa	Known RBP	4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	NTN3	O00634	580 aa	Predicted RBP	4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	CES2	O00748	559 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	DSCR3	O14972	297 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	KPNA5	O15131	536 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	PHGDH	O43175	533 aa	Known RBP	4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	LIAS	O43766	372 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	KIF1C	O43896	1103 aa	Known RBP	4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	MAGEC1	O60732	1142 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	SLC43A1	O75387	559 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	TM7SF2	O76062	418 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	TNFSF15	O95150	251 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	POP4	O95707	220 aa	Known RBP	4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	JCHAIN	P01591	159 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	PCCB	P05166	539 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	CHRM5	P08912	532 aa	Predicted RBP	4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	CCNB1	P14635	433 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	RBL1	P28749	1068 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	PEX19	P40855	299 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	MAPK9	P45984	424 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	STT3A	P46977	705 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	RABIF	P47224	123 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	POLD2	P49005	469 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	MAP2K6	P52564	334 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	MAZ	P56270	477 aa	Known RBP	4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	MAX	P61244	160 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	RHOA	P61586	193 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	HNRNPK	P61978	463 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	E2F1	Q01094	437 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	CFHR1	Q03591	330 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	PPID	Q08752	370 aa	Known RBP	4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	SLC10A7	Q0GE19	358 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	SGCG	Q13326	291 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	XRCC4	Q13426	336 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	IL10RA	Q13651	578 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	RFTN1	Q14699	578 aa	Predicted RBP	4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	SIX1	Q15475	284 aa	Predicted RBP	4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	C3orf36	Q3SXR2	165 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	LINC00303	Q3SY05	128 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	TMEM52B	Q4KMG9	183 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	CCDC38	Q502W7	563 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	MARC1	Q5VT66	337 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	MZT2A	Q6P582	158 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	ENPP7	Q6UWV6	458 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	TSPAN33	Q86UF1	283 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	TRIM74	Q86UV6	250 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	VASH2	Q86V25	355 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	PIM3	Q86V86	326 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	CDKL3	Q8IVW4	592 aa	Predicted RBP	4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	CCDC13	Q8IYE1	715 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	GALNT4	Q8N4A0	578 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563		Q8N9G6	341 aa	Predicted RBP	4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	ACTRT1	Q8TDG2	376 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	TFB1M	Q8WVM0	346 aa	Known RBP	4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	HTR3C	Q8WXA8	447 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	ATG4A	Q8WYN0	398 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	MAML1	Q92585	1016 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	ISG20	Q96AZ6	181 aa	Known RBP	4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	HDAC11	Q96DB2	347 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	TMEM41A	Q96HV5	264 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	CLPTM1L	Q96KA5	538 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	CAPZA3	Q96KX2	299 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	CCDC114	Q96M63	670 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	ZNF599	Q96NL3	588 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	SLC46A1	Q96NT5	459 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	OLFM3	Q96PB7	478 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	QKI	Q96PU8	341 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	LENG8	Q96PV6	779 aa	Predicted RBP	4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	IL12RB2	Q99665	862 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	APOO	Q9BUR5	198 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	CINP	Q9BW66	212 aa	Predicted RBP	4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	AP1M1	Q9BXS5	423 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	BRD8	Q9H0E9	1235 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	ABCG4	Q9H172	646 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	SLCO5A1	Q9H2Y9	848 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	EPB41L5	Q9HCM4	733 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	NT5M	Q9NPB1	228 aa		4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	SPATS2L	Q9NUQ6	558 aa	Known RBP	4.6	□□□□□ -1.67
RPRD1A-205	ENST00000587563	RBM22	Q9NW64	420 aa	Known RBP eCLIP	4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms