RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 IGLV3-12A0A075B6K2 115 aa19.58■□□□□ 0.72
CIRBP-209ENST00000586555 NCF1BA6NI72 391 aaPredicted RBP19.58■□□□□ 0.72
CIRBP-209ENST00000586555 NCF1CA8MVU1 366 aaPredicted RBP19.58■□□□□ 0.72
CIRBP-209ENST00000586555 P2RX6O15547 441 aa19.58■□□□□ 0.72
CIRBP-209ENST00000586555 LCMT2O60294 686 aaKnown RBP19.58■□□□□ 0.72
CIRBP-209ENST00000586555 CEACAM4O75871 244 aa19.58■□□□□ 0.72
CIRBP-209ENST00000586555 IPO13O94829 963 aaKnown RBP19.58■□□□□ 0.72
CIRBP-209ENST00000586555 WDR47O94967 919 aa19.58■□□□□ 0.72
CIRBP-209ENST00000586555 NCF1P14598 390 aaPredicted RBP19.58■□□□□ 0.72
CIRBP-209ENST00000586555 GNAZP19086 355 aa19.58■□□□□ 0.72
CIRBP-209ENST00000586555 CXCR2P25025 360 aa19.58■□□□□ 0.72
CIRBP-209ENST00000586555 SKP1P63208 163 aa19.58■□□□□ 0.72
CIRBP-209ENST00000586555 KLC1Q07866 573 aa19.58■□□□□ 0.72
CIRBP-209ENST00000586555 PWP1Q13610 501 aa19.58■□□□□ 0.72
CIRBP-209ENST00000586555 NIPAL1Q6NVV3 410 aa19.58■□□□□ 0.72
CIRBP-209ENST00000586555 SHISA6Q6ZSJ9 500 aa19.58■□□□□ 0.72
CIRBP-209ENST00000586555 VN1R4Q7Z5H5 301 aa19.58■□□□□ 0.72
CIRBP-209ENST00000586555 DTWD1Q8N5C7 304 aa19.58■□□□□ 0.72
CIRBP-209ENST00000586555 KIAA1191Q96A73 305 aa19.58■□□□□ 0.72
CIRBP-209ENST00000586555 MRRFQ96E11 262 aaKnown RBP19.58■□□□□ 0.72
CIRBP-209ENST00000586555 TSNARE1Q96NA8 513 aa19.58■□□□□ 0.72
CIRBP-209ENST00000586555 UNKQ9C0B0 810 aaKnown RBP19.58■□□□□ 0.72
CIRBP-209ENST00000586555 ACSS3Q9H6R3 686 aa19.58■□□□□ 0.72
CIRBP-209ENST00000586555 SYNPO2LQ9H987 977 aa19.58■□□□□ 0.72
CIRBP-209ENST00000586555 ANKHQ9HCJ1 492 aa19.58■□□□□ 0.72
CIRBP-209ENST00000586555 GPR83Q9NYM4 423 aa19.58■□□□□ 0.72
CIRBP-209ENST00000586555 WWOXQ9NZC7 414 aa19.58■□□□□ 0.72
CIRBP-209ENST00000586555 NBPF19A0A087WUL8 3843 aa19.58■□□□□ 0.72
CIRBP-209ENST00000586555 SHANK1Q9Y566 2161 aa19.57■□□□□ 0.72
CIRBP-209ENST00000586555 A0A087X1B8 175 aa19.57■□□□□ 0.72
CIRBP-209ENST00000586555 URADA6NGE7 173 aa19.57■□□□□ 0.72
CIRBP-209ENST00000586555 A6NL46 340 aa19.57■□□□□ 0.72
CIRBP-209ENST00000586555 PCDH17O14917 1159 aa19.57■□□□□ 0.72
CIRBP-209ENST00000586555 FOXS1O43638 330 aa19.57■□□□□ 0.72
CIRBP-209ENST00000586555 NSA2O95478 260 aaKnown RBP19.57■□□□□ 0.72
CIRBP-209ENST00000586555 LTA4HP09960 611 aaKnown RBP19.57■□□□□ 0.72
CIRBP-209ENST00000586555 MLLT10P55197 1068 aa19.57■□□□□ 0.72
CIRBP-209ENST00000586555 MEF2AQ02078 507 aaPredicted RBP19.57■□□□□ 0.72
CIRBP-209ENST00000586555 RGS1Q08116 209 aa19.57■□□□□ 0.72
CIRBP-209ENST00000586555 EFTUD2Q15029 972 aaKnown RBP eCLIP19.57■□□□□ 0.724e-26■■□□□ 13.4
CIRBP-209ENST00000586555 VWA2Q5GFL6 755 aa19.57■□□□□ 0.72
CIRBP-209ENST00000586555 CATSPEREQ5SY80 951 aa19.57■□□□□ 0.72
CIRBP-209ENST00000586555 IRAK1BP1Q5VVH5 260 aa19.57■□□□□ 0.72
CIRBP-209ENST00000586555 TMEM214Q6NUQ4 689 aaKnown RBP19.57■□□□□ 0.72
CIRBP-209ENST00000586555 NXPE4Q6UWF7 544 aa19.57■□□□□ 0.72
CIRBP-209ENST00000586555 TAOK1Q7L7X3 1001 aa19.57■□□□□ 0.72
CIRBP-209ENST00000586555 ARHGEF39Q8N4T4 335 aa19.57■□□□□ 0.72
CIRBP-209ENST00000586555 TGIF2Q9GZN2 237 aa19.57■□□□□ 0.72
CIRBP-209ENST00000586555 CDC42EP4Q9H3Q1 356 aaKnown RBP19.57■□□□□ 0.72
CIRBP-209ENST00000586555 ZFP69BQ9UJL9 534 aa19.57■□□□□ 0.72
CIRBP-209ENST00000586555 C3orf18Q9UK00 162 aa19.57■□□□□ 0.72
CIRBP-209ENST00000586555 SLC22A7Q9Y694 548 aa19.57■□□□□ 0.72
CIRBP-209ENST00000586555 ESPL1Q14674 2120 aa19.57■□□□□ 0.72
CIRBP-209ENST00000586555 NDUFS4O43181 175 aa19.56■□□□□ 0.72
CIRBP-209ENST00000586555 ACSL3O95573 720 aa19.56■□□□□ 0.72
CIRBP-209ENST00000586555 STATHP02808 62 aa19.56■□□□□ 0.72
CIRBP-209ENST00000586555 ALPPP05187 535 aa19.56■□□□□ 0.72
CIRBP-209ENST00000586555 SERPIND1P05546 499 aa19.56■□□□□ 0.72
CIRBP-209ENST00000586555 HEXBP07686 556 aa19.56■□□□□ 0.72
CIRBP-209ENST00000586555 INHBAP08476 426 aa19.56■□□□□ 0.72
CIRBP-209ENST00000586555 SLC35E2BP0CK96 405 aa19.56■□□□□ 0.72
CIRBP-209ENST00000586555 AHRP35869 848 aa19.56■□□□□ 0.72
CIRBP-209ENST00000586555 GGT5P36269 586 aa19.56■□□□□ 0.72
CIRBP-209ENST00000586555 FOXL2P58012 376 aa19.56■□□□□ 0.72
CIRBP-209ENST00000586555 AIMP2Q13155 320 aaKnown RBP19.56■□□□□ 0.72
CIRBP-209ENST00000586555 HERC3Q15034 1050 aa19.56■□□□□ 0.72
CIRBP-209ENST00000586555 FAM83EQ2M2I3 478 aa19.56■□□□□ 0.72
CIRBP-209ENST00000586555 TUBB8Q3ZCM7 444 aa19.56■□□□□ 0.72
CIRBP-209ENST00000586555 MROH9Q5TGP6 573 aa19.56■□□□□ 0.72
CIRBP-209ENST00000586555 CMC1Q7Z7K0 106 aa19.56■□□□□ 0.72
CIRBP-209ENST00000586555 TMPRSS11BQ86T26 416 aa19.56■□□□□ 0.72
CIRBP-209ENST00000586555 KLHDC8AQ8IYD2 350 aa19.56■□□□□ 0.72
CIRBP-209ENST00000586555 PRSS58Q8IYP2 241 aa19.56■□□□□ 0.72
CIRBP-209ENST00000586555 GALNT16Q8N428 558 aa19.56■□□□□ 0.72
CIRBP-209ENST00000586555 AMER3Q8N944 861 aa19.56■□□□□ 0.72
CIRBP-209ENST00000586555 TRPV3Q8NET8 790 aa19.56■□□□□ 0.72
CIRBP-209ENST00000586555 OR9A4Q8NGU2 314 aa19.56■□□□□ 0.72
CIRBP-209ENST00000586555 FUT8Q9BYC5 575 aa19.56■□□□□ 0.72
CIRBP-209ENST00000586555 GPRC5BQ9NZH0 403 aa19.56■□□□□ 0.72
CIRBP-209ENST00000586555 CCDC189A1A4V9 331 aa19.55■□□□□ 0.72
CIRBP-209ENST00000586555 CLGNO14967 610 aa19.55■□□□□ 0.72
CIRBP-209ENST00000586555 STK16O75716 305 aa19.55■□□□□ 0.72
CIRBP-209ENST00000586555 C1GALT1C1LP0DN25 315 aa19.55■□□□□ 0.72
CIRBP-209ENST00000586555 TFEBP19484 476 aa19.55■□□□□ 0.72
CIRBP-209ENST00000586555 TYK2P29597 1187 aa19.55■□□□□ 0.72
CIRBP-209ENST00000586555 SLC6A12P48065 614 aa19.55■□□□□ 0.72
CIRBP-209ENST00000586555 EMP2P54851 167 aa19.55■□□□□ 0.72
CIRBP-209ENST00000586555 CDC16Q13042 620 aa19.55■□□□□ 0.72
CIRBP-209ENST00000586555 RBBP5Q15291 538 aaKnown RBP19.55■□□□□ 0.72
CIRBP-209ENST00000586555 KRT78Q8N1N4 520 aa19.55■□□□□ 0.72
CIRBP-209ENST00000586555 KCT2Q8NC54 265 aa19.55■□□□□ 0.72
CIRBP-209ENST00000586555 FDCSPQ8NFU4 85 aa19.55■□□□□ 0.72
CIRBP-209ENST00000586555 MACROD1Q9BQ69 325 aa19.55■□□□□ 0.72
CIRBP-209ENST00000586555 DNAJC11Q9NVH1 559 aa19.55■□□□□ 0.72
CIRBP-209ENST00000586555 C5AR2Q9P296 337 aa19.55■□□□□ 0.72
CIRBP-209ENST00000586555 FBXL4Q9UKA2 621 aa19.55■□□□□ 0.72
CIRBP-209ENST00000586555 HS3ST3B1Q9Y662 390 aa19.55■□□□□ 0.72
CIRBP-209ENST00000586555 PRRC2CQ9Y520 2896 aaKnown RBP19.55■□□□□ 0.72
CIRBP-209ENST00000586555 ICE1Q9Y2F5 2266 aa19.55■□□□□ 0.72
CIRBP-209ENST00000586555 SYCE1LA8MT33 242 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms