RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 CAPN1P07384 714 aa13.01□□□□□ -0.33
VMP1-203ENST00000586245 CHRNGP07510 517 aa13.01□□□□□ -0.33
VMP1-203ENST00000586245 RBMS1P29558 406 aaKnown RBP13.01□□□□□ -0.33
VMP1-203ENST00000586245 ETV5P41161 510 aa13.01□□□□□ -0.33
VMP1-203ENST00000586245 KRT6CP48668 564 aa13.01□□□□□ -0.33
VMP1-203ENST00000586245 RGS1Q08116 209 aa13.01□□□□□ -0.33
VMP1-203ENST00000586245 BST1Q10588 318 aa13.01□□□□□ -0.33
VMP1-203ENST00000586245 PWP1Q13610 501 aa13.01□□□□□ -0.33
VMP1-203ENST00000586245 DDX39BQ13838 428 aaKnown RBP13.01□□□□□ -0.33
VMP1-203ENST00000586245 GRM7Q14831 915 aa13.01□□□□□ -0.33
VMP1-203ENST00000586245 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.01□□□□□ -0.33
VMP1-203ENST00000586245 C10orf62Q5T681 223 aaPredicted RBP13.01□□□□□ -0.33
VMP1-203ENST00000586245 FRG2Q64ET8 278 aa13.01□□□□□ -0.33
VMP1-203ENST00000586245 TLDC1Q6P9B6 456 aa13.01□□□□□ -0.33
VMP1-203ENST00000586245 TMEM126BQ8IUX1 230 aa13.01□□□□□ -0.33
VMP1-203ENST00000586245 LSMEM2Q8N112 164 aa13.01□□□□□ -0.33
VMP1-203ENST00000586245 LRRC8CQ8TDW0 803 aa13.01□□□□□ -0.33
VMP1-203ENST00000586245 ZNF75CPQ92670 426 aaPredicted RBP13.01□□□□□ -0.33
VMP1-203ENST00000586245 ZNF285Q96NJ3 590 aa13.01□□□□□ -0.33
VMP1-203ENST00000586245 TEFMQ96QE5 360 aaKnown RBP13.01□□□□□ -0.33
VMP1-203ENST00000586245 FRG2BQ96QU4 278 aa13.01□□□□□ -0.33
VMP1-203ENST00000586245 DDA1Q9BW61 102 aa13.01□□□□□ -0.33
VMP1-203ENST00000586245 ASPSCR1Q9BZE9 553 aa13.01□□□□□ -0.33
VMP1-203ENST00000586245 SPRTNQ9H040 489 aaPredicted RBP13.01□□□□□ -0.33
VMP1-203ENST00000586245 RHBGQ9H310 441 aa13.01□□□□□ -0.33
VMP1-203ENST00000586245 APMAPQ9HDC9 416 aa13.01□□□□□ -0.33
VMP1-203ENST00000586245 KLK13Q9UKR3 277 aa13.01□□□□□ -0.33
VMP1-203ENST00000586245 ADAMTS20P59510 1910 aa13□□□□□ -0.33
VMP1-203ENST00000586245 A0A1W2PNU3 283 aaPredicted RBP13□□□□□ -0.33
VMP1-203ENST00000586245 KLF11O14901 512 aa13□□□□□ -0.33
VMP1-203ENST00000586245 ITM2AO43736 263 aa13□□□□□ -0.33
VMP1-203ENST00000586245 CLEC3AO75596 197 aa13□□□□□ -0.33
VMP1-203ENST00000586245 LYPLA1O75608 230 aaPredicted RBP13□□□□□ -0.33
VMP1-203ENST00000586245 TNFSF15O95150 251 aa13□□□□□ -0.33
VMP1-203ENST00000586245 CHEK2O96017 543 aa13□□□□□ -0.33
VMP1-203ENST00000586245 STATHP02808 62 aa13□□□□□ -0.33
VMP1-203ENST00000586245 UROSP10746 265 aa13□□□□□ -0.33
VMP1-203ENST00000586245 PIK3CBP42338 1070 aa13□□□□□ -0.33
VMP1-203ENST00000586245 NDUFA9Q16795 377 aa13□□□□□ -0.33
VMP1-203ENST00000586245 SH2D4BQ5SQS7 431 aa13□□□□□ -0.33
VMP1-203ENST00000586245 MANEAQ5SRI9 462 aa13□□□□□ -0.33
VMP1-203ENST00000586245 CES4AQ5XG92 561 aa13□□□□□ -0.33
VMP1-203ENST00000586245 VN1R4Q7Z5H5 301 aa13□□□□□ -0.33
VMP1-203ENST00000586245 KIRREL3Q8IZU9 778 aa13□□□□□ -0.33
VMP1-203ENST00000586245 AFAP1L2Q8N4X5 818 aa13□□□□□ -0.33
VMP1-203ENST00000586245 WDR20Q8TBZ3 569 aa13□□□□□ -0.33
VMP1-203ENST00000586245 NT5CQ8TCD5 201 aa13□□□□□ -0.33
VMP1-203ENST00000586245 CKAP2Q8WWK9 683 aa13□□□□□ -0.33
VMP1-203ENST00000586245 SELENOMQ8WWX9 145 aa13□□□□□ -0.33
VMP1-203ENST00000586245 USP7Q93009 1102 aa13□□□□□ -0.33
VMP1-203ENST00000586245 MTFMTQ96DP5 389 aaKnown RBP13□□□□□ -0.33
VMP1-203ENST00000586245 TM4SF19Q96DZ7 209 aa13□□□□□ -0.33
VMP1-203ENST00000586245 NDC1Q9BTX1 674 aa13□□□□□ -0.33
VMP1-203ENST00000586245 SCNM1Q9BWG6 230 aa13□□□□□ -0.33
VMP1-203ENST00000586245 NRSN2Q9GZP1 204 aa13□□□□□ -0.33
VMP1-203ENST00000586245 STARD5Q9NSY2 213 aa13□□□□□ -0.33
VMP1-203ENST00000586245 THAP1Q9NVV9 213 aa13□□□□□ -0.33
VMP1-203ENST00000586245 TSC22D4Q9Y3Q8 395 aa13□□□□□ -0.33
VMP1-203ENST00000586245 TIMM22Q9Y584 194 aa13□□□□□ -0.33
VMP1-203ENST00000586245 HEATR5BQ9P2D3 2071 aa13□□□□□ -0.33
VMP1-203ENST00000586245 PTPRBP23467 1997 aa13□□□□□ -0.33
VMP1-203ENST00000586245 PMS2P1A4D2B8 440 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 FITM1A5D6W6 292 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 URADA6NGE7 173 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 FOXE1O00358 373 aaPredicted RBP12.99□□□□□ -0.33
VMP1-203ENST00000586245 MANBAO00462 879 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 AZIN1O14977 448 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 ZNF749O43361 778 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 ULK1O75385 1050 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 SCRG1O75711 98 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 CTSBP07858 339 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 SERPINA6P08185 405 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 ADRB1P08588 477 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 HBQ1P09105 142 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 SPINK2P20155 84 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 ARRB2P32121 409 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 ARSFP54793 590 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 STXBP1P61764 594 aaKnown RBP12.99□□□□□ -0.33
VMP1-203ENST00000586245 HKDC1Q2TB90 917 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 PRTGQ2VWP7 1150 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 FAM214AQ32MH5 1076 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 SGO1Q5FBB7 561 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 GARNL3Q5VVW2 1013 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 PWWP2BQ6NUJ5 590 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 CLYBLQ8N0X4 340 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 HUS1BQ8NHY5 278 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 AGR3Q8TD06 166 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 CREB3L4Q8TEY5 395 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 ZNF473Q8WTR7 871 aaKnown RBP12.99□□□□□ -0.33
VMP1-203ENST00000586245 NXPE2Q96DL1 559 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 CMTM7Q96FZ5 175 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 PRR11Q96HE9 360 aaPredicted RBP12.99□□□□□ -0.33
VMP1-203ENST00000586245 MAGEB18Q96M61 343 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 KCNA7Q96RP8 456 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 MTERF1Q99551 399 aaKnown RBP12.99□□□□□ -0.33
VMP1-203ENST00000586245 CENPKQ9BS16 269 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 B3GNT4Q9C0J1 378 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 ILKAPQ9H0C8 392 aaPredicted RBP12.99□□□□□ -0.33
VMP1-203ENST00000586245 SYNPO2LQ9H987 977 aa12.99□□□□□ -0.33
VMP1-203ENST00000586245 TXLNGQ9NUQ3 528 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms