RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 ASMTP46597 345 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 EIF2B2P49770 351 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 RAE1P78406 368 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 SP3Q02447 781 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 ELP6Q0PNE2 266 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 INAVAQ3KP66 663 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 LRRC73Q5JTD7 316 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 VPS37AQ8NEZ2 397 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 MCFD2Q8NI22 146 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CLP1Q92989 425 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CEP44Q9C0F1 390 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 DCSTAMPQ9H295 470 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 ZDHHC6Q9H6R6 413 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 BRF2Q9HAW0 419 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 PSORS1C1Q9UIG5 152 aa13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 PNMA8BQ9ULN7 279 aaPredicted RBP13.69□□□□□ -0.22
CDK5RAP3-237ENST00000585163 AQP9O43315 295 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CNOT3O75175 753 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 GCM2O75603 506 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 ETHE1O95571 254 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CKMP06732 381 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 GSTM1P09488 218 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CD40LGP29965 261 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 AQP1P29972 269 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 C21orf33P30042 268 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 PCGF2P35227 344 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 GGT2P36268 569 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 UGT2B10P36537 528 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 HNF4AP41235 474 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 FPGSQ05932 587 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 GAB1Q13480 694 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 TEAD4Q15561 434 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 TBCEQ15813 527 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 SYT16Q17RD7 645 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 GRHL2Q6ISB3 625 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 Q6ZPB1 254 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 DPY19L3Q6ZPD9 716 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 NPAS3Q8IXF0 933 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 KCNC2Q96PR1 638 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 MRPL17Q9NRX2 175 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 TMEM184CQ9NVA4 438 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 VPS4AQ9UN37 437 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 WDR37Q9Y2I8 494 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 LYVE1Q9Y5Y7 322 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 SCN5AQ14524 2016 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 ARHGEF33A8MVX0 844 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 M0R082 166 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 RFPL2O75678 378 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 POP4O95707 220 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 VIPP01282 170 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 ANXA4P09525 319 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 HLA-FP30511 346 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CLK1P49759 484 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 SELENOWP63302 87 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CYP4F8P98187 520 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 PRSS36Q5K4E3 855 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 ANXA8L1Q5VT79 327 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 NAGSQ8N159 534 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 C1orf52Q8N6N3 182 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 C11orf65Q8NCR3 313 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 COQ8BQ96D53 544 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 SCLYQ96I15 445 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 DACH2Q96NX9 599 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 FEVQ99581 238 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 MMP27Q9H306 513 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 ZBTB20Q9HC78 741 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 NDUFAF4Q9P032 175 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 MAPRE3Q9UPY8 281 aa13.68□□□□□ -0.22
CDK5RAP3-237ENST00000585163 ADAMDEC1O15204 470 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 AIREO43918 545 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 PSIP1O75475 530 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 IDSP22304 550 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 EIF2DP41214 584 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 PCDH1Q08174 1060 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 PPIGQ13427 754 aaKnown RBP eCLIP13.67□□□□□ -0.228e-9■■■■□ 23.1
CDK5RAP3-237ENST00000585163 ZNF404Q494X3 552 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 GAREM2Q75VX8 874 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 LACC1Q8IV20 430 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 DNAJC22Q8N4W6 341 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 MYDGFQ969H8 173 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 OR4K3Q96R72 315 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 EMILIN2Q9BXX0 1053 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 SGK2Q9HBY8 427 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 FKBP14Q9NWM8 211 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 SCHIP1Q9P0W5 487 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 CLCA1A8K7I4 914 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 TNFRSF11BO00300 401 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 PCDH7O60245 1069 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 AP2A2O94973 939 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 GABRR2P28476 465 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 SLC7A9P82251 487 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 NAE1Q13564 534 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 HKDC1Q2TB90 917 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 ADNP2Q6IQ32 1131 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 AGTRAPQ6RW13 159 aa13.67□□□□□ -0.22
CDK5RAP3-237ENST00000585163 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.67□□□□□ -0.221e-10■■■■■ 46
CDK5RAP3-237ENST00000585163 SLC22A16Q86VW1 577 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms