RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 TGIF2Q9GZN2 237 aa17.06■□□□□ 0.32
SRSF1-208ENST00000584773 ASF1BQ9NVP2 202 aa17.06■□□□□ 0.32
SRSF1-208ENST00000584773 IGHV1-45A0A0A0MS14 117 aa17.05■□□□□ 0.32
SRSF1-208ENST00000584773 NSG1A0A0A6YYJ2 146 aa17.05■□□□□ 0.32
SRSF1-208ENST00000584773 IGHV3-20A0A0C4DH32 117 aa17.05■□□□□ 0.32
SRSF1-208ENST00000584773 OR1F1O43749 312 aa17.05■□□□□ 0.32
SRSF1-208ENST00000584773 DNAJB6O75190 326 aa17.05■□□□□ 0.32
SRSF1-208ENST00000584773 IPO13O94829 963 aaKnown RBP17.05■□□□□ 0.32
SRSF1-208ENST00000584773 NSA2O95478 260 aaKnown RBP17.05■□□□□ 0.32
SRSF1-208ENST00000584773 C1QAP02745 245 aa17.05■□□□□ 0.32
SRSF1-208ENST00000584773 ENO2P09104 434 aaPredicted RBP17.05■□□□□ 0.32
SRSF1-208ENST00000584773 CCR8P51685 355 aa17.05■□□□□ 0.32
SRSF1-208ENST00000584773 PLTPP55058 493 aa17.05■□□□□ 0.32
SRSF1-208ENST00000584773 GPX6P59796 221 aa17.05■□□□□ 0.32
SRSF1-208ENST00000584773 CBLBQ13191 982 aa17.05■□□□□ 0.32
SRSF1-208ENST00000584773 PCOLCEQ15113 449 aa17.05■□□□□ 0.32
SRSF1-208ENST00000584773 MFSD4BQ5TF39 518 aa17.05■□□□□ 0.32
SRSF1-208ENST00000584773 ZDHHC24Q6UX98 284 aa17.05■□□□□ 0.32
SRSF1-208ENST00000584773 MAATS1Q7Z4T9 603 aa17.05■□□□□ 0.32
SRSF1-208ENST00000584773 IQCKQ8N0W5 287 aa17.05■□□□□ 0.32
SRSF1-208ENST00000584773 NKAPQ8N5F7 415 aaKnown RBP17.05■□□□□ 0.32
SRSF1-208ENST00000584773 CAMKVQ8NCB2 501 aa17.05■□□□□ 0.32
SRSF1-208ENST00000584773 OR5T3Q8NGG3 340 aa17.05■□□□□ 0.32
SRSF1-208ENST00000584773 OR51Q1Q8NH59 317 aa17.05■□□□□ 0.32
SRSF1-208ENST00000584773 BRIX1Q8TDN6 353 aaKnown RBP17.05■□□□□ 0.32
SRSF1-208ENST00000584773 SLC5A11Q8WWX8 675 aa17.05■□□□□ 0.32
SRSF1-208ENST00000584773 THAP11Q96EK4 314 aa17.05■□□□□ 0.32
SRSF1-208ENST00000584773 VN1R1Q9GZP7 353 aa17.05■□□□□ 0.32
SRSF1-208ENST00000584773 NOVA2Q9UNW9 492 aaKnown RBP17.05■□□□□ 0.32
SRSF1-208ENST00000584773 SLC22A14Q9Y267 594 aa17.05■□□□□ 0.32
SRSF1-208ENST00000584773 TCRBV9S1A1TA0A576 114 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 H0YIG0 161 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 PHGDHO43175 533 aaKnown RBP17.04■□□□□ 0.32
SRSF1-208ENST00000584773 NDUFS4O43181 175 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 WISP3O95389 354 aaPredicted RBP17.04■□□□□ 0.32
SRSF1-208ENST00000584773 SERPIND1P05546 499 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 CXCR2P25025 360 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 GRK3P35626 688 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 XCR1P46094 333 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 GLRBP48167 497 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 MINDY4Q4G0A6 757 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 FBXO48Q5FWF7 155 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 CRB2Q5IJ48 1285 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 IRAK1BP1Q5VVH5 260 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 IGFL2Q6UWQ7 119 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 NDUFAF7Q7L592 441 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 TMPRSS11BQ86T26 416 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 THOC6Q86W42 341 aaKnown RBP17.04■□□□□ 0.32
SRSF1-208ENST00000584773 CCDC25Q86WR0 208 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 FAM26EQ8N5C1 309 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 SIRT6Q8N6T7 355 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 CATSPER1Q8NEC5 780 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 OR4K1Q8NGD4 311 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 FBXO25Q8TCJ0 367 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 ATL1Q8WXF7 558 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 PSMF1Q92530 271 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 TM9SF4Q92544 642 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 CNDP1Q96KN2 507 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 EGFL8Q99944 293 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 WDR77Q9BQA1 342 aaPredicted RBP17.04■□□□□ 0.32
SRSF1-208ENST00000584773 GPAMQ9HCL2 828 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 PTGFRNQ9P2B2 879 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 NAALAD2Q9Y3Q0 740 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 PCDHGA10Q9Y5H3 936 aa17.04■□□□□ 0.32
SRSF1-208ENST00000584773 TRBC2A0A5B9 178 aa17.03■□□□□ 0.32
SRSF1-208ENST00000584773 ESYT3A0FGR9 886 aa17.03■□□□□ 0.32
SRSF1-208ENST00000584773 NCF1BA6NI72 391 aaPredicted RBP17.03■□□□□ 0.32
SRSF1-208ENST00000584773 NCF1CA8MVU1 366 aaPredicted RBP17.03■□□□□ 0.32
SRSF1-208ENST00000584773 CDC123O75794 336 aaPredicted RBP17.03■□□□□ 0.32
SRSF1-208ENST00000584773 FAM155BO75949 473 aa17.03■□□□□ 0.32
SRSF1-208ENST00000584773 F10P00742 488 aa17.03■□□□□ 0.32
SRSF1-208ENST00000584773 PRR35P0CG20 571 aa17.03■□□□□ 0.32
SRSF1-208ENST00000584773 NCF1P14598 390 aaPredicted RBP17.03■□□□□ 0.32
SRSF1-208ENST00000584773 VARSP26640 1264 aaKnown RBP17.03■□□□□ 0.32
SRSF1-208ENST00000584773 GDF5P43026 501 aa17.03■□□□□ 0.32
SRSF1-208ENST00000584773 OLR1P78380 273 aa17.03■□□□□ 0.32
SRSF1-208ENST00000584773 REEP5Q00765 189 aa17.03■□□□□ 0.32
SRSF1-208ENST00000584773 SLC7A5Q01650 507 aa17.03■□□□□ 0.32
SRSF1-208ENST00000584773 CSHL1Q14406 222 aa17.03■□□□□ 0.32
SRSF1-208ENST00000584773 NR6A1Q15406 480 aa17.03■□□□□ 0.32
SRSF1-208ENST00000584773 B3GNTL1Q67FW5 361 aaPredicted RBP17.03■□□□□ 0.32
SRSF1-208ENST00000584773 TMEM205Q6UW68 189 aa17.03■□□□□ 0.32
SRSF1-208ENST00000584773 KBTBD2Q8IY47 623 aa17.03■□□□□ 0.32
SRSF1-208ENST00000584773 VPS50Q96JG6 964 aa17.03■□□□□ 0.32
SRSF1-208ENST00000584773 ANKHQ9HCJ1 492 aa17.03■□□□□ 0.32
SRSF1-208ENST00000584773 NSMCE4AQ9NXX6 385 aa17.03■□□□□ 0.32
SRSF1-208ENST00000584773 PLA2G3Q9NZ20 509 aa17.03■□□□□ 0.32
SRSF1-208ENST00000584773 CTNNAL1Q9UBT7 734 aa17.03■□□□□ 0.32
SRSF1-208ENST00000584773 OARD1Q9Y530 152 aa17.03■□□□□ 0.32
SRSF1-208ENST00000584773 CPAMD8Q8IZJ3 1885 aa17.03■□□□□ 0.32
SRSF1-208ENST00000584773 LOC102723996A0A087X1L8 192 aa17.02■□□□□ 0.32
SRSF1-208ENST00000584773 A0A1W2PQ72 361 aa17.02■□□□□ 0.32
SRSF1-208ENST00000584773 FAM159BA6NKW6 160 aa17.02■□□□□ 0.32
SRSF1-208ENST00000584773 NDC80O14777 642 aa17.02■□□□□ 0.32
SRSF1-208ENST00000584773 EIF3HO15372 352 aaKnown RBP eCLIP17.02■□□□□ 0.321e-9■□□□□ 8.2
SRSF1-208ENST00000584773 KLHL41O60662 606 aa17.02■□□□□ 0.32
SRSF1-208ENST00000584773 SEC24DO94855 1032 aaPredicted RBP17.02■□□□□ 0.32
SRSF1-208ENST00000584773 SLC35G6P0C7Q6 338 aa17.02■□□□□ 0.32
SRSF1-208ENST00000584773 RNF224P0DH78 156 aa17.02■□□□□ 0.32
SRSF1-208ENST00000584773 C8orf89P0DMQ9 161 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms