RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 GPSM1Q86YR5 675 aa19.37■□□□□ 0.69
SS18-224ENST00000584083 PARP9Q8IXQ6 854 aa19.37■□□□□ 0.69
SS18-224ENST00000584083 MMGT1Q8N4V1 131 aa19.37■□□□□ 0.69
SS18-224ENST00000584083 ZNF740Q8NDX6 193 aa19.37■□□□□ 0.69
SS18-224ENST00000584083 C8orf44Q96CB5 159 aa19.37■□□□□ 0.69
SS18-224ENST00000584083 TGIF2Q9GZN2 237 aa19.37■□□□□ 0.69
SS18-224ENST00000584083 MTRF1LQ9UGC7 380 aaKnown RBP19.37■□□□□ 0.69
SS18-224ENST00000584083 SGK494L7N484 410 aa19.36■□□□□ 0.69
SS18-224ENST00000584083 KIF2AO00139 706 aaPredicted RBP19.36■□□□□ 0.69
SS18-224ENST00000584083 NDUFS4O43181 175 aa19.36■□□□□ 0.69
SS18-224ENST00000584083 WDR47O94967 919 aa19.36■□□□□ 0.69
SS18-224ENST00000584083 TUBB4AP04350 444 aa19.36■□□□□ 0.69
SS18-224ENST00000584083 ATP6V0D1P61421 351 aa19.36■□□□□ 0.69
SS18-224ENST00000584083 NAB1Q13506 487 aa19.36■□□□□ 0.69
SS18-224ENST00000584083 EFTUD2Q15029 972 aaKnown RBP eCLIP19.36■□□□□ 0.69
SS18-224ENST00000584083 C18orf21Q32NC0 220 aaPredicted RBP19.36■□□□□ 0.69
SS18-224ENST00000584083 RAPH1Q70E73 1250 aa19.36■□□□□ 0.69
SS18-224ENST00000584083 ZC3H7AQ8IWR0 971 aaKnown RBP19.36■□□□□ 0.69
SS18-224ENST00000584083 NOA1Q8NC60 698 aaKnown RBP19.36■□□□□ 0.69
SS18-224ENST00000584083 RHBDF1Q96CC6 855 aa19.36■□□□□ 0.69
SS18-224ENST00000584083 MRRFQ96E11 262 aaKnown RBP19.36■□□□□ 0.69
SS18-224ENST00000584083 AIF1LQ9BQI0 150 aa19.36■□□□□ 0.69
SS18-224ENST00000584083 MESP1Q9BRJ9 268 aa19.36■□□□□ 0.69
SS18-224ENST00000584083 ZNF552Q9H707 407 aaPredicted RBP19.36■□□□□ 0.69
SS18-224ENST00000584083 MKL2Q9ULH7 1088 aa19.36■□□□□ 0.69
SS18-224ENST00000584083 NBASA2RRP1 2371 aa19.36■□□□□ 0.69
SS18-224ENST00000584083 SCN2AQ99250 2005 aa19.35■□□□□ 0.69
SS18-224ENST00000584083 CTAGE15A4D2H0 777 aa19.35■□□□□ 0.69
SS18-224ENST00000584083 HPP00738 406 aa19.35■□□□□ 0.69
SS18-224ENST00000584083 CTAGE8P0CG41 777 aa19.35■□□□□ 0.69
SS18-224ENST00000584083 CD1DP15813 335 aa19.35■□□□□ 0.69
SS18-224ENST00000584083 GDF5P43026 501 aa19.35■□□□□ 0.69
SS18-224ENST00000584083 FOXK1P85037 733 aa19.35■□□□□ 0.69
SS18-224ENST00000584083 TGFBIQ15582 683 aa19.35■□□□□ 0.69
SS18-224ENST00000584083 MFSD4BQ5TF39 518 aa19.35■□□□□ 0.69
SS18-224ENST00000584083 ATG9BQ674R7 924 aa19.35■□□□□ 0.69
SS18-224ENST00000584083 JMJD6Q6NYC1 403 aaPredicted RBP19.35■□□□□ 0.69
SS18-224ENST00000584083 NXPE4Q6UWF7 544 aa19.35■□□□□ 0.69
SS18-224ENST00000584083 CEP128Q6ZU80 1094 aa19.35■□□□□ 0.69
SS18-224ENST00000584083 CTAGE6Q86UF2 777 aa19.35■□□□□ 0.69
SS18-224ENST00000584083 CTAGE4Q8IX94 777 aa19.35■□□□□ 0.69
SS18-224ENST00000584083 RBMXL3Q8N7X1 1067 aaKnown RBP19.35■□□□□ 0.69
SS18-224ENST00000584083 OR51Q1Q8NH59 317 aa19.35■□□□□ 0.69
SS18-224ENST00000584083 MOCOSQ96EN8 888 aa19.35■□□□□ 0.69
SS18-224ENST00000584083 SARGQ9BW04 601 aa19.35■□□□□ 0.69
SS18-224ENST00000584083 SPNS1Q9H2V7 528 aa19.35■□□□□ 0.69
SS18-224ENST00000584083 PELI2Q9HAT8 420 aa19.35■□□□□ 0.69
SS18-224ENST00000584083 ZNF160Q9HCG1 818 aa19.35■□□□□ 0.69
SS18-224ENST00000584083 WWOXQ9NZC7 414 aa19.35■□□□□ 0.69
SS18-224ENST00000584083 LUZP4Q9P127 313 aa19.35■□□□□ 0.69
SS18-224ENST00000584083 HCN3Q9P1Z3 774 aa19.35■□□□□ 0.69
SS18-224ENST00000584083 PLAAQ9Y263 795 aa19.35■□□□□ 0.69
SS18-224ENST00000584083 NSG1A0A0A6YYJ2 146 aa19.34■□□□□ 0.69
SS18-224ENST00000584083 H2AFYO75367 372 aaKnown RBP19.34■□□□□ 0.69
SS18-224ENST00000584083 BMP10O95393 424 aa19.34■□□□□ 0.69
SS18-224ENST00000584083 PHBP35232 272 aa19.34■□□□□ 0.69
SS18-224ENST00000584083 SCTRP47872 440 aa19.34■□□□□ 0.69
SS18-224ENST00000584083 REEP5Q00765 189 aa19.34■□□□□ 0.69
SS18-224ENST00000584083 EEF1A2Q05639 463 aaKnown RBP19.34■□□□□ 0.69
SS18-224ENST00000584083 RGS1Q08116 209 aa19.34■□□□□ 0.69
SS18-224ENST00000584083 PWP1Q13610 501 aa19.34■□□□□ 0.69
SS18-224ENST00000584083 RBBP5Q15291 538 aaKnown RBP19.34■□□□□ 0.69
SS18-224ENST00000584083 OR4D1Q15615 310 aa19.34■□□□□ 0.69
SS18-224ENST00000584083 ZKSCAN8Q15776 578 aaPredicted RBP19.34■□□□□ 0.69
SS18-224ENST00000584083 TCAIMQ8N3R3 496 aa19.34■□□□□ 0.69
SS18-224ENST00000584083 KIF18AQ8NI77 898 aa19.34■□□□□ 0.69
SS18-224ENST00000584083 IFT81Q8WYA0 676 aa19.34■□□□□ 0.69
SS18-224ENST00000584083 TM9SF4Q92544 642 aa19.34■□□□□ 0.69
SS18-224ENST00000584083 TRIM44Q96DX7 344 aaPredicted RBP19.34■□□□□ 0.69
SS18-224ENST00000584083 THOC3Q96J01 351 aaKnown RBP19.34■□□□□ 0.69
SS18-224ENST00000584083 LHPPQ9H008 270 aa19.34■□□□□ 0.69
SS18-224ENST00000584083 SLAMF7Q9NQ25 335 aa19.34■□□□□ 0.69
SS18-224ENST00000584083 CD274Q9NZQ7 290 aa19.34■□□□□ 0.69
SS18-224ENST00000584083 DMGDHQ9UI17 866 aaKnown RBP19.34■□□□□ 0.69
SS18-224ENST00000584083 ZFP69BQ9UJL9 534 aa19.34■□□□□ 0.69
SS18-224ENST00000584083 NAALAD2Q9Y3Q0 740 aa19.34■□□□□ 0.69
SS18-224ENST00000584083 SLC22A7Q9Y694 548 aa19.34■□□□□ 0.69
SS18-224ENST00000584083 RDH16O75452 317 aa19.33■□□□□ 0.68
SS18-224ENST00000584083 JRKO75564 520 aa19.33■□□□□ 0.68
SS18-224ENST00000584083 KLHL18O94889 574 aa19.33■□□□□ 0.68
SS18-224ENST00000584083 S100BP04271 92 aaPredicted RBP19.33■□□□□ 0.68
SS18-224ENST00000584083 GNAZP19086 355 aa19.33■□□□□ 0.68
SS18-224ENST00000584083 CRABP2P29373 138 aa19.33■□□□□ 0.68
SS18-224ENST00000584083 AHRP35869 848 aa19.33■□□□□ 0.68
SS18-224ENST00000584083 GMPRP36959 345 aa19.33■□□□□ 0.68
SS18-224ENST00000584083 XCR1P46094 333 aa19.33■□□□□ 0.68
SS18-224ENST00000584083 SLC6A12P48065 614 aa19.33■□□□□ 0.68
SS18-224ENST00000584083 HERC3Q15034 1050 aa19.33■□□□□ 0.68
SS18-224ENST00000584083 UAP1Q16222 522 aaPredicted RBP19.33■□□□□ 0.68
SS18-224ENST00000584083 MINDY4Q4G0A6 757 aa19.33■□□□□ 0.68
SS18-224ENST00000584083 AGAP7PQ5VUJ5 663 aa19.33■□□□□ 0.68
SS18-224ENST00000584083 SLC6A19Q695T7 634 aa19.33■□□□□ 0.68
SS18-224ENST00000584083 NDUFAF7Q7L592 441 aa19.33■□□□□ 0.68
SS18-224ENST00000584083 CMC1Q7Z7K0 106 aa19.33■□□□□ 0.68
SS18-224ENST00000584083 TBC1D1Q86TI0 1168 aaPredicted RBP19.33■□□□□ 0.68
SS18-224ENST00000584083 ZADH2Q8N4Q0 377 aa19.33■□□□□ 0.68
SS18-224ENST00000584083 EFCAB3Q8N7B9 438 aa19.33■□□□□ 0.68
SS18-224ENST00000584083 METTL21AQ8WXB1 218 aa19.33■□□□□ 0.68
SS18-224ENST00000584083 EXT2Q93063 718 aa19.33■□□□□ 0.68
SS18-224ENST00000584083 PNPLA2Q96AD5 504 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms