RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 FBXL8Q96CD0 374 aa15.02■□□□□ -0
CRLF3-203ENST00000578692 IMMP1LQ96LU5 166 aa15.02■□□□□ -0
CRLF3-203ENST00000578692 TUBB6Q9BUF5 446 aa15.02■□□□□ -0
CRLF3-203ENST00000578692 TRIM31Q9BZY9 425 aa15.02■□□□□ -0
CRLF3-203ENST00000578692 VN1R1Q9GZP7 353 aa15.02■□□□□ -0
CRLF3-203ENST00000578692 PLA2G3Q9NZ20 509 aa15.02■□□□□ -0
CRLF3-203ENST00000578692 ERRFI1Q9UJM3 462 aaPredicted RBP15.02■□□□□ -0
CRLF3-203ENST00000578692 WIPF3A6NGB9 483 aa15.01□□□□□ -0.01
CRLF3-203ENST00000578692 SEC31AO94979 1220 aaKnown RBP15.01□□□□□ -0.01
CRLF3-203ENST00000578692 GUCA1CO95843 209 aa15.01□□□□□ -0.01
CRLF3-203ENST00000578692 UQCRHP07919 91 aa15.01□□□□□ -0.01
CRLF3-203ENST00000578692 CYC1P08574 325 aa15.01□□□□□ -0.01
CRLF3-203ENST00000578692 ENO2P09104 434 aaPredicted RBP15.01□□□□□ -0.01
CRLF3-203ENST00000578692 SLC35G6P0C7Q6 338 aa15.01□□□□□ -0.01
CRLF3-203ENST00000578692 ITGAMP11215 1152 aa15.01□□□□□ -0.01
CRLF3-203ENST00000578692 XCR1P46094 333 aa15.01□□□□□ -0.01
CRLF3-203ENST00000578692 CCR8P51685 355 aa15.01□□□□□ -0.01
CRLF3-203ENST00000578692 MEF2AQ02078 507 aaPredicted RBP15.01□□□□□ -0.01
CRLF3-203ENST00000578692 PDIA2Q13087 525 aaKnown RBP15.01□□□□□ -0.01
CRLF3-203ENST00000578692 FRG1Q14331 258 aaKnown RBP15.01□□□□□ -0.01
CRLF3-203ENST00000578692 MINDY4Q4G0A6 757 aa15.01□□□□□ -0.01
CRLF3-203ENST00000578692 ANP32BQ92688 251 aaKnown RBP15.01□□□□□ -0.01
CRLF3-203ENST00000578692 OR4K3Q96R72 315 aa15.01□□□□□ -0.01
CRLF3-203ENST00000578692 SARGQ9BW04 601 aa15.01□□□□□ -0.01
CRLF3-203ENST00000578692 HCN3Q9P1Z3 774 aa15.01□□□□□ -0.01
CRLF3-203ENST00000578692 ZFATQ9P243 1243 aa15.01□□□□□ -0.01
CRLF3-203ENST00000578692 SLC5A6Q9Y289 635 aa15.01□□□□□ -0.01
CRLF3-203ENST00000578692 SLC22A7Q9Y694 548 aa15.01□□□□□ -0.01
CRLF3-203ENST00000578692 EFCAB8A8MWE9 144 aa15□□□□□ -0.01
CRLF3-203ENST00000578692 TP73O15350 636 aa15□□□□□ -0.01
CRLF3-203ENST00000578692 OR1F1O43749 312 aa15□□□□□ -0.01
CRLF3-203ENST00000578692 SAT1P21673 171 aa15□□□□□ -0.01
CRLF3-203ENST00000578692 TNFSF10P50591 281 aa15□□□□□ -0.01
CRLF3-203ENST00000578692 MGAT5Q09328 741 aa15□□□□□ -0.01
CRLF3-203ENST00000578692 CSHL1Q14406 222 aa15□□□□□ -0.01
CRLF3-203ENST00000578692 HIST2H2BCQ6DN03 193 aa15□□□□□ -0.01
CRLF3-203ENST00000578692 FAM180AQ6UWF9 173 aa15□□□□□ -0.01
CRLF3-203ENST00000578692 TMEM207Q6UWW9 146 aa15□□□□□ -0.01
CRLF3-203ENST00000578692 CPEB2Q7Z5Q1 589 aaKnown RBP15□□□□□ -0.01
CRLF3-203ENST00000578692 STRA8Q7Z7C7 330 aa15□□□□□ -0.01
CRLF3-203ENST00000578692 PDSS2Q86YH6 399 aa15□□□□□ -0.01
CRLF3-203ENST00000578692 AMER2Q8N7J2 671 aa15□□□□□ -0.01
CRLF3-203ENST00000578692 FBXO36Q8NEA4 188 aa15□□□□□ -0.01
CRLF3-203ENST00000578692 C5orf34Q96MH7 638 aa15□□□□□ -0.01
CRLF3-203ENST00000578692 MOCS1Q9NZB8 636 aa15□□□□□ -0.01
CRLF3-203ENST00000578692 RNF14Q9UBS8 474 aa15□□□□□ -0.01
CRLF3-203ENST00000578692 C19orf25Q9UFG5 118 aaPredicted RBP15□□□□□ -0.01
CRLF3-203ENST00000578692 NAALAD2Q9Y3Q0 740 aa15□□□□□ -0.01
CRLF3-203ENST00000578692 PSAT1Q9Y617 370 aa15□□□□□ -0.01
CRLF3-203ENST00000578692 RP1L1Q8IWN7 2480 aaPredicted RBP15□□□□□ -0.01
CRLF3-203ENST00000578692 TRAV17A0A0B4J275 112 aa14.99□□□□□ -0.01
CRLF3-203ENST00000578692 IGHV3-20A0A0C4DH32 117 aa14.99□□□□□ -0.01
CRLF3-203ENST00000578692 TRBC2A0A5B9 178 aa14.99□□□□□ -0.01
CRLF3-203ENST00000578692 OR2W5A6NFC9 320 aa14.99□□□□□ -0.01
CRLF3-203ENST00000578692 E7ESA3 106 aa14.99□□□□□ -0.01
CRLF3-203ENST00000578692 RDH16O75452 317 aa14.99□□□□□ -0.01
CRLF3-203ENST00000578692 SEC24DO94855 1032 aaPredicted RBP14.99□□□□□ -0.01
CRLF3-203ENST00000578692 LDLRP01130 860 aa14.99□□□□□ -0.01
CRLF3-203ENST00000578692 EDN3P14138 238 aa14.99□□□□□ -0.01
CRLF3-203ENST00000578692 AGTR2P50052 363 aa14.99□□□□□ -0.01
CRLF3-203ENST00000578692 PWP1Q13610 501 aa14.99□□□□□ -0.01
CRLF3-203ENST00000578692 HERC3Q15034 1050 aa14.99□□□□□ -0.01
CRLF3-203ENST00000578692 CATSPEREQ5SY80 951 aa14.99□□□□□ -0.01
CRLF3-203ENST00000578692 SBSNQ6UWP8 590 aa14.99□□□□□ -0.01
CRLF3-203ENST00000578692 LANCL3Q6ZV70 420 aa14.99□□□□□ -0.01
CRLF3-203ENST00000578692 ZC3HC1Q86WB0 502 aaKnown RBP14.99□□□□□ -0.01
CRLF3-203ENST00000578692 NKAPQ8N5F7 415 aaKnown RBP14.99□□□□□ -0.01
CRLF3-203ENST00000578692 TBC1D19Q8N5T2 526 aa14.99□□□□□ -0.01
CRLF3-203ENST00000578692 ANKRD7Q92527 254 aa14.99□□□□□ -0.01
CRLF3-203ENST00000578692 NEIL2Q969S2 332 aa14.99□□□□□ -0.01
CRLF3-203ENST00000578692 MOCOSQ96EN8 888 aa14.99□□□□□ -0.01
CRLF3-203ENST00000578692 KRT12Q99456 494 aa14.99□□□□□ -0.01
CRLF3-203ENST00000578692 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.99□□□□□ -0.01
CRLF3-203ENST00000578692 STMN3Q9NZ72 180 aa14.99□□□□□ -0.01
CRLF3-203ENST00000578692 IKZF3Q9UKT9 509 aa14.99□□□□□ -0.01
CRLF3-203ENST00000578692 SNX24Q9Y343 169 aa14.99□□□□□ -0.01
CRLF3-203ENST00000578692 LRRK2Q5S007 2527 aa14.99□□□□□ -0.01
CRLF3-203ENST00000578692 USP9XQ93008 2570 aaPredicted RBP14.99□□□□□ -0.01
CRLF3-203ENST00000578692 FAM95CA0A1B0GW59 222 aa14.98□□□□□ -0.01
CRLF3-203ENST00000578692 A1L4Q6 167 aa14.98□□□□□ -0.01
CRLF3-203ENST00000578692 NDUFS4O43181 175 aa14.98□□□□□ -0.01
CRLF3-203ENST00000578692 WDPCPO95876 746 aa14.98□□□□□ -0.01
CRLF3-203ENST00000578692 F10P00742 488 aa14.98□□□□□ -0.01
CRLF3-203ENST00000578692 SERPIND1P05546 499 aa14.98□□□□□ -0.01
CRLF3-203ENST00000578692 ZNF37AP17032 561 aaPredicted RBP14.98□□□□□ -0.01
CRLF3-203ENST00000578692 IL10P22301 178 aa14.98□□□□□ -0.01
CRLF3-203ENST00000578692 RPL21P46778 160 aaKnown RBP14.98□□□□□ -0.01
CRLF3-203ENST00000578692 FASTKD3Q14CZ7 662 aaKnown RBP14.98□□□□□ -0.01
CRLF3-203ENST00000578692 BTBD16Q32M84 506 aa14.98□□□□□ -0.01
CRLF3-203ENST00000578692 ABHD17BQ5VST6 288 aa14.98□□□□□ -0.01
CRLF3-203ENST00000578692 PLAG1Q6DJT9 500 aa14.98□□□□□ -0.01
CRLF3-203ENST00000578692 ANKRD37Q7Z713 158 aa14.98□□□□□ -0.01
CRLF3-203ENST00000578692 BCORP1Q8N888 145 aa14.98□□□□□ -0.01
CRLF3-203ENST00000578692 ZNF740Q8NDX6 193 aa14.98□□□□□ -0.01
CRLF3-203ENST00000578692 PLPP5Q8NEB5 264 aa14.98□□□□□ -0.01
CRLF3-203ENST00000578692 SLC5A11Q8WWX8 675 aa14.98□□□□□ -0.01
CRLF3-203ENST00000578692 PEX11GQ96HA9 241 aa14.98□□□□□ -0.01
CRLF3-203ENST00000578692 PDLIM2Q96JY6 352 aa14.98□□□□□ -0.01
CRLF3-203ENST00000578692 MAGEB10Q96LZ2 347 aaPredicted RBP14.98□□□□□ -0.01
CRLF3-203ENST00000578692 TEKT2Q9UIF3 430 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms