RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 PDE7BQ9NP56 450 aa9.06□□□□□ -0.96
NPLOC4-219ENST00000576713 LNPEPQ9UIQ6 1025 aa9.06□□□□□ -0.96
NPLOC4-219ENST00000576713 ZNF180Q9UJW8 692 aa9.06□□□□□ -0.96
NPLOC4-219ENST00000576713 RALYQ9UKM9 306 aaKnown RBP9.06□□□□□ -0.96
NPLOC4-219ENST00000576713 PCDHB14Q9Y5E9 798 aa9.06□□□□□ -0.96
NPLOC4-219ENST00000576713 LOC101059948A0A1B0GTJ6 334 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 A0A1W2PPM1 405 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 LRRC14BA6NHZ5 514 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 H7BY64 318 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 UBXN8O00124 270 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 HAT1O14929 419 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 P2RX6O15547 441 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 KLK10O43240 276 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 KDM1AO60341 852 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 RAD1O60671 282 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 SCRG1O75711 98 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 HTR3BO95264 441 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 PGRP06401 933 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 ENO2P09104 434 aaPredicted RBP9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 MSL3P1P0C860 447 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 LIPCP11150 499 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 ATF4P18848 351 aaPredicted RBP9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 EPORP19235 508 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 CRABP2P29373 138 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 RPA3P35244 121 aaPredicted RBP9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 SLCO1A2P46721 670 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 SLC6A12P48065 614 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 AGTR2P50052 363 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 SERPINB8P50452 374 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 AP1S2P56377 157 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 NFKB2Q00653 900 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 MEF2AQ02078 507 aaPredicted RBP9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 ACY1Q03154 408 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 CLCQ05315 142 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 PRDX1Q06830 199 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 DOC2BQ14184 412 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 IL11RAQ14626 422 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 COL28A1Q2UY09 1125 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 PTCHD3Q3KNS1 767 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 CATSPEREQ5SY80 951 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 PRAMEF13Q5VWM6 474 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 CEACAM20Q6UY09 585 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 GK5Q6ZS86 529 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 BEND4Q6ZU67 534 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 RNF44Q7L0R7 432 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 PPP1R3BQ86XI6 285 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 MCATQ8IVS2 390 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 KCT2Q8NC54 265 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 ZNF248Q8NDW4 579 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 ZNF740Q8NDX6 193 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 HNRNPLLQ8WVV9 542 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 UBLCP1Q8WVY7 318 aaPredicted RBP9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 KCNE4Q8WWG9 221 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 EXT2Q93063 718 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 KIAA1191Q96A73 305 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 RHBDF1Q96CC6 855 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 SEC16BQ96JE7 1060 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 TSNARE1Q96NA8 513 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 ZNF285Q96NJ3 590 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 PRAP1Q96NZ9 151 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 MACROD1Q9BQ69 325 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 PLCD4Q9BRC7 762 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 ASPSCR1Q9BZE9 553 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 B3GNT4Q9C0J1 378 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 CHRNA10Q9GZZ6 450 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 VPS11Q9H270 941 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 CPNE5Q9HCH3 593 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 CCDC177Q9NQR7 707 aaPredicted RBP9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 PCMTD2Q9NV79 361 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 TBK1Q9UHD2 729 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 RARRES3Q9UL19 164 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 RAB21Q9UL25 225 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 ACOT9Q9Y305 439 aa9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 MRPS18BQ9Y676 258 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-219ENST00000576713 PCSK5Q92824 1860 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 ACACAQ13085 2346 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 A0A087X1B8 175 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 A0A0J9YVX5 310 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 FEZF1A0PJY2 475 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 SMIM23A6NLE4 172 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 STMND1H3BQB6 276 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 GOLGA8RI6L899 631 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 MSTNO14793 375 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 ZNF749O43361 778 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 LCMT2O60294 686 aaKnown RBP9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 KLHL2O95198 593 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 CAPN1P07384 714 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 LTA4HP09960 611 aaKnown RBP9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 CDH1P12830 882 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 LIFP15018 202 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 TYK2P29597 1187 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 CMPK1P30085 196 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 RORAP35398 523 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 HSD17B2P37059 387 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 SERPINB9P50453 376 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 VSX2P58304 361 aaPredicted RBP9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 ATP6V0D1P61421 351 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 CSNK1G2P78368 415 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 CDKL1Q00532 357 aa9.04□□□□□ -0.96
NPLOC4-219ENST00000576713 MAP7Q14244 749 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms