RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 HIST1H2ADP20671 130 aa11.25□□□□□ -0.61
LITAF-219ENST00000576334 GDF5P43026 501 aa11.25□□□□□ -0.61
LITAF-219ENST00000576334 FAM53BQ14153 422 aa11.25□□□□□ -0.61
LITAF-219ENST00000576334 TSNQ15631 228 aaKnown RBP11.25□□□□□ -0.61
LITAF-219ENST00000576334 MFSD4BQ5TF39 518 aa11.25□□□□□ -0.61
LITAF-219ENST00000576334 AGAP7PQ5VUJ5 663 aa11.25□□□□□ -0.61
LITAF-219ENST00000576334 DUPD1Q68J44 220 aa11.25□□□□□ -0.61
LITAF-219ENST00000576334 LRRC8EQ6NSJ5 796 aa11.25□□□□□ -0.61
LITAF-219ENST00000576334 IGFL2Q6UWQ7 119 aa11.25□□□□□ -0.61
LITAF-219ENST00000576334 SYT10Q6XYQ8 523 aa11.25□□□□□ -0.61
LITAF-219ENST00000576334 NDUFAF7Q7L592 441 aa11.25□□□□□ -0.61
LITAF-219ENST00000576334 ASPGQ86U10 573 aa11.25□□□□□ -0.61
LITAF-219ENST00000576334 IQCKQ8N0W5 287 aa11.25□□□□□ -0.61
LITAF-219ENST00000576334 MFSD9Q8NBP5 474 aa11.25□□□□□ -0.61
LITAF-219ENST00000576334 OR51Q1Q8NH59 317 aa11.25□□□□□ -0.61
LITAF-219ENST00000576334 PRR7Q8TB68 274 aa11.25□□□□□ -0.61
LITAF-219ENST00000576334 DNAJB14Q8TBM8 379 aa11.25□□□□□ -0.61
LITAF-219ENST00000576334 SLC13A3Q8WWT9 602 aa11.25□□□□□ -0.61
LITAF-219ENST00000576334 FBXL8Q96CD0 374 aa11.25□□□□□ -0.61
LITAF-219ENST00000576334 MVB12AQ96EY5 273 aa11.25□□□□□ -0.61
LITAF-219ENST00000576334 HIST1H2AHQ96KK5 128 aa11.25□□□□□ -0.61
LITAF-219ENST00000576334 AGAP4Q96P64 663 aa11.25□□□□□ -0.61
LITAF-219ENST00000576334 HIST1H2AJQ99878 128 aa11.25□□□□□ -0.61
LITAF-219ENST00000576334 ERP44Q9BS26 406 aa11.25□□□□□ -0.61
LITAF-219ENST00000576334 H2AFJQ9BTM1 129 aa11.25□□□□□ -0.61
LITAF-219ENST00000576334 TGIF2Q9GZN2 237 aa11.25□□□□□ -0.61
LITAF-219ENST00000576334 MKKSQ9NPJ1 570 aaPredicted RBP11.25□□□□□ -0.61
LITAF-219ENST00000576334 NAALAD2Q9Y3Q0 740 aa11.25□□□□□ -0.61
LITAF-219ENST00000576334 PCDHGA10Q9Y5H3 936 aa11.25□□□□□ -0.61
LITAF-219ENST00000576334 HIVEP3Q5T1R4 2406 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 NCF1BA6NI72 391 aaPredicted RBP11.24□□□□□ -0.61
LITAF-219ENST00000576334 NCF1CA8MVU1 366 aaPredicted RBP11.24□□□□□ -0.61
LITAF-219ENST00000576334 C4orf51C9J302 202 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 TXNDC9O14530 226 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 PHGDHO43175 533 aaKnown RBP11.24□□□□□ -0.61
LITAF-219ENST00000576334 NDUFS4O43181 175 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 FAM155BO75949 473 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 IPO13O94829 963 aaKnown RBP11.24□□□□□ -0.61
LITAF-219ENST00000576334 SEC24DO94855 1032 aaPredicted RBP11.24□□□□□ -0.61
LITAF-219ENST00000576334 AGFG2O95081 481 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 NSA2O95478 260 aaKnown RBP11.24□□□□□ -0.61
LITAF-219ENST00000576334 CBX6O95503 412 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 C1QAP02745 245 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 NCF1P14598 390 aaPredicted RBP11.24□□□□□ -0.61
LITAF-219ENST00000576334 VARSP26640 1264 aaKnown RBP11.24□□□□□ -0.61
LITAF-219ENST00000576334 HNF4AP41235 474 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 XCR1P46094 333 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 AVPR1BP47901 424 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 GPX6P59796 221 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 FRG1Q14331 258 aaKnown RBP11.24□□□□□ -0.61
LITAF-219ENST00000576334 NDUFA9Q16795 377 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 MINDY4Q4G0A6 757 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 TMEM205Q6UW68 189 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 THOC6Q86W42 341 aaKnown RBP11.24□□□□□ -0.61
LITAF-219ENST00000576334 HPS6Q86YV9 775 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 KBTBD2Q8IY47 623 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 ANKRD53Q8N9V6 530 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 ABHD11Q8NFV4 315 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 OR4K1Q8NGD4 311 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 GABPB2Q8TAK5 448 aaPredicted RBP11.24□□□□□ -0.61
LITAF-219ENST00000576334 PYROXD1Q8WU10 500 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 ESAMQ96AP7 390 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 PEX11GQ96HA9 241 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 VPS39Q96JC1 886 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 PSMG3-AS1Q96PY0 264 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 WDR77Q9BQA1 342 aaPredicted RBP11.24□□□□□ -0.61
LITAF-219ENST00000576334 AICDAQ9GZX7 198 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 PCBD2Q9H0N5 130 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 C14orf105Q9NVL8 296 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 CORO1CQ9ULV4 474 aaPredicted RBP11.24□□□□□ -0.61
LITAF-219ENST00000576334 SLC22A14Q9Y267 594 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 COPG1Q9Y678 874 aaKnown RBP11.24□□□□□ -0.61
LITAF-219ENST00000576334 ICE1Q9Y2F5 2266 aa11.24□□□□□ -0.61
LITAF-219ENST00000576334 CPAMD8Q8IZJ3 1885 aa11.23□□□□□ -0.61
LITAF-219ENST00000576334 SPTAN1Q13813 2472 aaKnown RBP11.23□□□□□ -0.61
LITAF-219ENST00000576334 TCRBV9S1A1TA0A576 114 aa11.23□□□□□ -0.61
LITAF-219ENST00000576334 PRPF4O43172 522 aaKnown RBP eCLIP11.23□□□□□ -0.61
LITAF-219ENST00000576334 C8orf89P0DMQ9 161 aa11.23□□□□□ -0.61
LITAF-219ENST00000576334 HRH2P25021 359 aa11.23□□□□□ -0.61
LITAF-219ENST00000576334 CXCR2P25025 360 aa11.23□□□□□ -0.61
LITAF-219ENST00000576334 CASQ1P31415 396 aa11.23□□□□□ -0.61
LITAF-219ENST00000576334 CCR8P51685 355 aa11.23□□□□□ -0.61
LITAF-219ENST00000576334 AP1S2P56377 157 aa11.23□□□□□ -0.61
LITAF-219ENST00000576334 MFAP5Q13361 173 aa11.23□□□□□ -0.61
LITAF-219ENST00000576334 UBAP2Q5T6F2 1119 aaKnown RBP11.23□□□□□ -0.61
LITAF-219ENST00000576334 IRAK1BP1Q5VVH5 260 aa11.23□□□□□ -0.61
LITAF-219ENST00000576334 FCRLBQ6BAA4 426 aa11.23□□□□□ -0.61
LITAF-219ENST00000576334 ISLR2Q6UXK2 745 aa11.23□□□□□ -0.61
LITAF-219ENST00000576334 TMPRSS11BQ86T26 416 aa11.23□□□□□ -0.61
LITAF-219ENST00000576334 CAMKVQ8NCB2 501 aa11.23□□□□□ -0.61
LITAF-219ENST00000576334 PPP4R1Q8TF05 950 aa11.23□□□□□ -0.61
LITAF-219ENST00000576334 SLC5A11Q8WWX8 675 aa11.23□□□□□ -0.61
LITAF-219ENST00000576334 TM9SF4Q92544 642 aa11.23□□□□□ -0.61
LITAF-219ENST00000576334 TSLPQ969D9 159 aa11.23□□□□□ -0.61
LITAF-219ENST00000576334 PDLIM5Q96HC4 596 aaKnown RBP11.23□□□□□ -0.61
LITAF-219ENST00000576334 MAGEB10Q96LZ2 347 aaPredicted RBP11.23□□□□□ -0.61
LITAF-219ENST00000576334 CYTH2Q99418 400 aa11.23□□□□□ -0.61
LITAF-219ENST00000576334 EGFL8Q99944 293 aa11.23□□□□□ -0.61
LITAF-219ENST00000576334 HAUS8Q9BT25 410 aa11.23□□□□□ -0.61
LITAF-219ENST00000576334 ZNF700Q9H0M5 742 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms