RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 FGD3Q5JSP0 725 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 TICAM1Q8IUC6 712 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 FAM20CQ8IXL6 584 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 HUS1BQ8NHY5 278 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 C10orf82Q8WW14 230 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 PDLIM5Q96HC4 596 aaKnown RBP9.74□□□□□ -0.85
SMG6-213ENST00000573166 SMOXQ9NWM0 555 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 RARRES3Q9UL19 164 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 FAM234BA2RU67 622 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 MAGEB17A8MXT2 336 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 RTCAO00442 366 aaKnown RBP9.74□□□□□ -0.85
SMG6-213ENST00000573166 BTN3A3O00478 584 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 TRIM38O00635 465 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 CAPN5O15484 640 aaPredicted RBP9.74□□□□□ -0.85
SMG6-213ENST00000573166 DEAF1O75398 565 aaPredicted RBP9.74□□□□□ -0.85
SMG6-213ENST00000573166 SERPINB7O75635 380 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 MATN4O95460 622 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 FASP25445 335 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 KIR2DL1P43626 348 aaPredicted RBP9.74□□□□□ -0.85
SMG6-213ENST00000573166 DLG1Q12959 904 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 NR0B2Q15466 257 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 RFTN2Q52LD8 501 aaPredicted RBP9.74□□□□□ -0.85
SMG6-213ENST00000573166 WLSQ5T9L3 541 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 TTLL10Q6ZVT0 673 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 ATG16L2Q8NAA4 619 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 ZNF555Q8NEP9 628 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 CYGBQ8WWM9 190 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 MR1Q95460 341 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 NEIL2Q969S2 332 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 ZNF607Q96SK3 696 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 ATOH8Q96SQ7 321 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 GABRG3Q99928 467 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 CCDC90BQ9GZT6 254 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 UTS2RQ9UKP6 389 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 SLC6A14Q9UN76 642 aa9.74□□□□□ -0.85
SMG6-213ENST00000573166 COPG1Q9Y678 874 aaKnown RBP9.74□□□□□ -0.85
SMG6-213ENST00000573166 CACNA1HO95180 2353 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 AHCTF1Q8WYP5 2266 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 TMEM221A6NGB7 291 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 M0R296 226 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 SEC24DO94855 1032 aaPredicted RBP9.73□□□□□ -0.85
SMG6-213ENST00000573166 ZNF763Q0D2J5 394 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 DUOXA1Q1HG43 343 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 OR4F3Q6IEY1 312 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 VRK3Q8IV63 474 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 OR9I1Q8NGQ6 314 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 UBXN10Q96LJ8 280 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 ZFYVE21Q9BQ24 234 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 GPRC5BQ9NZH0 403 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 RAPGEFL1Q9UHV5 662 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 MRTO4Q9UKD2 239 aaKnown RBP9.73□□□□□ -0.85
SMG6-213ENST00000573166 CACNA1EQ15878 2313 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 H3BNH8 94 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 JUNP05412 331 aaKnown RBP9.73□□□□□ -0.85
SMG6-213ENST00000573166 C8orf89P0DMQ9 161 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 UQCRBP14927 111 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 PVRP15151 417 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 IL1RNP18510 177 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 JAK1P23458 1154 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 FCARP24071 287 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 DIO3P55073 304 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 ERVPABLB-1P60509 514 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 EMX2Q04743 252 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 RALGDSQ12967 914 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 MED21Q13503 144 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 ABRAXAS2Q15018 415 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 CTC1Q2NKJ3 1217 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 KHDC1Q4VXA5 237 aaKnown RBP9.73□□□□□ -0.85
SMG6-213ENST00000573166 EPGNQ6UW88 154 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 CDK20Q8IZL9 346 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 RBM15BQ8NDT2 890 aaKnown RBP9.73□□□□□ -0.85
SMG6-213ENST00000573166 BHLHE22Q8NFJ8 381 aaPredicted RBP9.73□□□□□ -0.85
SMG6-213ENST00000573166 OR5K2Q8NHB8 316 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 TM9SF3Q9HD45 589 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 NEU3Q9UQ49 428 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 PTGDR2Q9Y5Y4 395 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 DOCK6Q96HP0 2047 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 SOX1O00570 391 aaPredicted RBP9.73□□□□□ -0.85
SMG6-213ENST00000573166 FKBP6O75344 327 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 CDC123O75794 336 aaPredicted RBP9.73□□□□□ -0.85
SMG6-213ENST00000573166 UBXN7O94888 489 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 FCGR1AP12314 374 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 DRD3P35462 400 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 KCNC1P48547 511 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 ID2Q02363 134 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 BCL7AQ4VC05 210 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 NOXRED1Q6NXP6 359 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 TRIM69Q86WT6 500 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 C1orf210Q8IVY1 113 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 IL22RA1Q8N6P7 574 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 PJA1Q8NG27 643 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 L3HYPDHQ96EM0 354 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 KCNC2Q96PR1 638 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 CHRDQ9H2X0 955 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 DCLRE1BQ9H816 532 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 CHCHD3Q9NX63 227 aaKnown RBP9.73□□□□□ -0.85
SMG6-213ENST00000573166 RPS6KA6Q9UK32 745 aa9.73□□□□□ -0.85
SMG6-213ENST00000573166 SLC9B1P1A6NJY1 282 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 GREM1O60565 184 aa9.72□□□□□ -0.85
SMG6-213ENST00000573166 LDLRP01130 860 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms