RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 RP1L1Q8IWN7 2480 aaPredicted RBP16.38■□□□□ 0.21
SMG6-212ENST00000573153 PABPN1LA6NDY0 278 aaKnown RBP16.38■□□□□ 0.21
SMG6-212ENST00000573153 NPEPPSL1A6NEC2 478 aa16.38■□□□□ 0.21
SMG6-212ENST00000573153 C4orf51C9J302 202 aa16.38■□□□□ 0.21
SMG6-212ENST00000573153 PCDH17O14917 1159 aa16.38■□□□□ 0.21
SMG6-212ENST00000573153 IPO13O94829 963 aaKnown RBP16.38■□□□□ 0.21
SMG6-212ENST00000573153 IL1RNP18510 177 aa16.38■□□□□ 0.21
SMG6-212ENST00000573153 PLTPP55058 493 aa16.38■□□□□ 0.21
SMG6-212ENST00000573153 MEF2AQ02078 507 aaPredicted RBP16.38■□□□□ 0.21
SMG6-212ENST00000573153 GUCY2DQ02846 1103 aa16.38■□□□□ 0.21
SMG6-212ENST00000573153 MRPL49Q13405 166 aaKnown RBP16.38■□□□□ 0.21
SMG6-212ENST00000573153 NDUFA9Q16795 377 aa16.38■□□□□ 0.21
SMG6-212ENST00000573153 C3orf62Q6ZUJ4 267 aa16.38■□□□□ 0.21
SMG6-212ENST00000573153 KLHDC8AQ8IYD2 350 aa16.38■□□□□ 0.21
SMG6-212ENST00000573153 FAM26EQ8N5C1 309 aa16.38■□□□□ 0.21
SMG6-212ENST00000573153 NEIL2Q969S2 332 aa16.38■□□□□ 0.21
SMG6-212ENST00000573153 VPS50Q96JG6 964 aa16.38■□□□□ 0.21
SMG6-212ENST00000573153 IMMP1LQ96LU5 166 aa16.38■□□□□ 0.21
SMG6-212ENST00000573153 PSMG3-AS1Q96PY0 264 aa16.38■□□□□ 0.21
SMG6-212ENST00000573153 GPR22Q99680 433 aa16.38■□□□□ 0.21
SMG6-212ENST00000573153 WDR77Q9BQA1 342 aaPredicted RBP16.38■□□□□ 0.21
SMG6-212ENST00000573153 VN1R1Q9GZP7 353 aa16.38■□□□□ 0.21
SMG6-212ENST00000573153 LHPPQ9H008 270 aa16.38■□□□□ 0.21
SMG6-212ENST00000573153 ASF1BQ9NVP2 202 aa16.38■□□□□ 0.21
SMG6-212ENST00000573153 OR2W5A6NFC9 320 aa16.37■□□□□ 0.21
SMG6-212ENST00000573153 MAP2K7O14733 419 aa16.37■□□□□ 0.21
SMG6-212ENST00000573153 ALPPP05187 535 aa16.37■□□□□ 0.21
SMG6-212ENST00000573153 EMP2P54851 167 aa16.37■□□□□ 0.21
SMG6-212ENST00000573153 REEP5Q00765 189 aa16.37■□□□□ 0.21
SMG6-212ENST00000573153 EEF1A2Q05639 463 aaKnown RBP16.37■□□□□ 0.21
SMG6-212ENST00000573153 HYAL2Q12891 473 aa16.37■□□□□ 0.21
SMG6-212ENST00000573153 WHAMMP3Q1A5X7 153 aa16.37■□□□□ 0.21
SMG6-212ENST00000573153 C18orf21Q32NC0 220 aaPredicted RBP16.37■□□□□ 0.21
SMG6-212ENST00000573153 ADAMTSL2Q86TH1 951 aa16.37■□□□□ 0.21
SMG6-212ENST00000573153 ASPGQ86U10 573 aa16.37■□□□□ 0.21
SMG6-212ENST00000573153 ATCAYQ86WG3 371 aa16.37■□□□□ 0.21
SMG6-212ENST00000573153 ANKRD53Q8N9V6 530 aa16.37■□□□□ 0.21
SMG6-212ENST00000573153 CAMKVQ8NCB2 501 aa16.37■□□□□ 0.21
SMG6-212ENST00000573153 THOC3Q96J01 351 aaKnown RBP16.37■□□□□ 0.21
SMG6-212ENST00000573153 RBBP8Q99708 897 aa16.37■□□□□ 0.21
SMG6-212ENST00000573153 DERL2Q9GZP9 239 aa16.37■□□□□ 0.21
SMG6-212ENST00000573153 ZNF700Q9H0M5 742 aa16.37■□□□□ 0.21
SMG6-212ENST00000573153 LANCL2Q9NS86 450 aa16.37■□□□□ 0.21
SMG6-212ENST00000573153 MTO1Q9Y2Z2 717 aaKnown RBP16.37■□□□□ 0.21
SMG6-212ENST00000573153 OARD1Q9Y530 152 aa16.37■□□□□ 0.21
SMG6-212ENST00000573153 HIVEP3Q5T1R4 2406 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 TRBC2A0A5B9 178 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 SGK494L7N484 410 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 E2F3O00716 465 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 SEMA7AO75326 666 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 GUCA1CO95843 209 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 B3GALT4O96024 378 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 CYC1P08574 325 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 PRR35P0CG20 571 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 GRK3P35626 688 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 GMPRP36959 345 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 GP5P40197 560 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 MAGEA4P43358 317 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 SCTRP47872 440 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 SLC6A12P48065 614 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 HNMTP50135 292 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 CCR8P51685 355 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 MFAP5Q13361 173 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 NAB1Q13506 487 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 ZKSCAN8Q15776 578 aaPredicted RBP16.36■□□□□ 0.21
SMG6-212ENST00000573153 CAPN12Q6ZSI9 719 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 LANCL3Q6ZV70 420 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 NDUFAF7Q7L592 441 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 CISD2Q8N5K1 135 aaKnown RBP16.36■□□□□ 0.21
SMG6-212ENST00000573153 ZCCHC10Q8TBK6 192 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 ALKBH8Q96BT7 664 aaKnown RBP16.36■□□□□ 0.21
SMG6-212ENST00000573153 TSPAN17Q96FV3 270 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 C16orf45Q96MC5 204 aaPredicted RBP16.36■□□□□ 0.21
SMG6-212ENST00000573153 CAB39LQ9H9S4 337 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 LRRC4CQ9HCJ2 640 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 GPAMQ9HCL2 828 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 SLAMF7Q9NQ25 335 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 ZDHHC18Q9NUE0 388 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 HCN3Q9P1Z3 774 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 SLC22A7Q9Y694 548 aa16.36■□□□□ 0.21
SMG6-212ENST00000573153 SCN3AQ9NY46 2000 aa16.35■□□□□ 0.21
SMG6-212ENST00000573153 PRAMEF4O60810 478 aa16.35■□□□□ 0.21
SMG6-212ENST00000573153 RDH16O75452 317 aa16.35■□□□□ 0.21
SMG6-212ENST00000573153 CBX6O95503 412 aa16.35■□□□□ 0.21
SMG6-212ENST00000573153 TBX6O95947 436 aaPredicted RBP16.35■□□□□ 0.21
SMG6-212ENST00000573153 TUBB4AP04350 444 aa16.35■□□□□ 0.21
SMG6-212ENST00000573153 ANXA5P08758 320 aa16.35■□□□□ 0.21
SMG6-212ENST00000573153 SMIM10L1P0DMW3 83 aa16.35■□□□□ 0.21
SMG6-212ENST00000573153 SAT1P21673 171 aa16.35■□□□□ 0.21
SMG6-212ENST00000573153 TSNQ15631 228 aaKnown RBP16.35■□□□□ 0.21
SMG6-212ENST00000573153 CDKL4Q5MAI5 379 aa16.35■□□□□ 0.21
SMG6-212ENST00000573153 AGAP7PQ5VUJ5 663 aa16.35■□□□□ 0.21
SMG6-212ENST00000573153 PRAMEF9Q5VWM5 478 aa16.35■□□□□ 0.21
SMG6-212ENST00000573153 FAAH2Q6GMR7 532 aa16.35■□□□□ 0.21
SMG6-212ENST00000573153 C8orf74Q6P047 294 aa16.35■□□□□ 0.21
SMG6-212ENST00000573153 IQCKQ8N0W5 287 aa16.35■□□□□ 0.21
SMG6-212ENST00000573153 OR5T3Q8NGG3 340 aa16.35■□□□□ 0.21
SMG6-212ENST00000573153 NT5CQ8TCD5 201 aa16.35■□□□□ 0.21
SMG6-212ENST00000573153 BRIX1Q8TDN6 353 aaKnown RBP16.35■□□□□ 0.21
SMG6-212ENST00000573153 SLC13A3Q8WWT9 602 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms