RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 TMEM266Q2M3C6 531 aa2.51□□□□□ -2.01
UBR1-209ENST00000569243 BMP2KLQ5H9B9 411 aa2.51□□□□□ -2.01
UBR1-209ENST00000569243 FGD3Q5JSP0 725 aa2.51□□□□□ -2.01
UBR1-209ENST00000569243 C6orf163Q5TEZ5 329 aa2.51□□□□□ -2.01
UBR1-209ENST00000569243 GPR139Q6DWJ6 353 aa2.51□□□□□ -2.01
UBR1-209ENST00000569243 CCBE1Q6UXH8 406 aaPredicted RBP2.51□□□□□ -2.01
UBR1-209ENST00000569243 IQCHQ86VS3 1027 aa2.51□□□□□ -2.01
UBR1-209ENST00000569243 KCNE4Q8WWG9 221 aa2.51□□□□□ -2.01
UBR1-209ENST00000569243 SEPT1Q8WYJ6 367 aa2.51□□□□□ -2.01
UBR1-209ENST00000569243 TSACCQ96A04 125 aaPredicted RBP2.51□□□□□ -2.01
UBR1-209ENST00000569243 HDAC11Q96DB2 347 aa2.51□□□□□ -2.01
UBR1-209ENST00000569243 KLHL5Q96PQ7 755 aa2.51□□□□□ -2.01
UBR1-209ENST00000569243 BTBD9Q96Q07 612 aa2.51□□□□□ -2.01
UBR1-209ENST00000569243 SLC2A11Q9BYW1 496 aa2.51□□□□□ -2.01
UBR1-209ENST00000569243 DNAI2Q9GZS0 605 aa2.51□□□□□ -2.01
UBR1-209ENST00000569243 UBA5Q9GZZ9 404 aa2.51□□□□□ -2.01
UBR1-209ENST00000569243 RAVER2Q9HCJ3 691 aaKnown RBP2.51□□□□□ -2.01
UBR1-209ENST00000569243 DNAJC4Q9NNZ3 241 aa2.51□□□□□ -2.01
UBR1-209ENST00000569243 TBC1D13Q9NVG8 400 aa2.51□□□□□ -2.01
UBR1-209ENST00000569243 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.51□□□□□ -2.01
UBR1-209ENST00000569243 NPHP3Q7Z494 1330 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 IGHV3-38A0A0C4DH36 116 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 MTMR11A4FU01 709 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 AP5Z1O43299 807 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 CYTIPO60759 359 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 ACSL3O95573 720 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 STARD3NLO95772 234 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 PCP11498 1178 aaKnown RBP2.5□□□□□ -2.01
UBR1-209ENST00000569243 CYP11B2P19099 503 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 IL11P20809 199 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 HSD17B3P37058 310 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 RAB28P51157 221 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 CLCN4P51793 760 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 NDST2P52849 883 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 FKBP3Q00688 224 aaKnown RBP2.5□□□□□ -2.01
UBR1-209ENST00000569243 CACNG1Q06432 222 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 RASGEF1BQ0VAM2 473 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 BECN1Q14457 450 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 ZNF146Q15072 292 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 FAM189A2Q15884 450 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 PTGISQ16647 500 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 ERMARDQ5T6L9 678 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 ATP1A1-AS1Q5TC04 95 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 ZBTB49Q6ZSB9 765 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 TIPARPQ7Z3E1 657 aaKnown RBP2.5□□□□□ -2.01
UBR1-209ENST00000569243 CPEB2Q7Z5Q1 589 aaKnown RBP2.5□□□□□ -2.01
UBR1-209ENST00000569243 TLK2Q86UE8 772 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 SLC22A15Q8IZD6 547 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 SLC34A3Q8N130 599 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.5□□□□□ -2.01
UBR1-209ENST00000569243 NSMAFQ92636 917 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 C11orf52Q96A22 123 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 OTUB1Q96FW1 271 aaPredicted RBP2.5□□□□□ -2.01
UBR1-209ENST00000569243 LURAP1Q96LR2 239 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 FBXL4Q9UKA2 621 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 PILRBQ9UKJ0 227 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 VSIG4Q9Y279 399 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 STYXL1Q9Y6J8 313 aa2.5□□□□□ -2.01
UBR1-209ENST00000569243 MTRF1O75570 445 aaKnown RBP2.49□□□□□ -2.01
UBR1-209ENST00000569243 CELF2O95319 508 aaKnown RBP2.49□□□□□ -2.01
UBR1-209ENST00000569243 FYNP06241 537 aa2.49□□□□□ -2.01
UBR1-209ENST00000569243 YES1P07947 543 aa2.49□□□□□ -2.01
UBR1-209ENST00000569243 MYL6BP14649 208 aa2.49□□□□□ -2.01
UBR1-209ENST00000569243 DRD3P35462 400 aa2.49□□□□□ -2.01
UBR1-209ENST00000569243 PPIAP62937 165 aaKnown RBP2.49□□□□□ -2.01
UBR1-209ENST00000569243 IFI35P80217 286 aaPredicted RBP2.49□□□□□ -2.01
UBR1-209ENST00000569243 RBPJQ06330 500 aa2.49□□□□□ -2.01
UBR1-209ENST00000569243 ACSM1Q08AH1 577 aa2.49□□□□□ -2.01
UBR1-209ENST00000569243 UPP1Q16831 310 aa2.49□□□□□ -2.01
UBR1-209ENST00000569243 FAM174BQ3ZCQ3 159 aa2.49□□□□□ -2.01
UBR1-209ENST00000569243 CST9LP1Q5W188 147 aa2.49□□□□□ -2.01
UBR1-209ENST00000569243 CTR9Q6PD62 1173 aa2.49□□□□□ -2.01
UBR1-209ENST00000569243 CASP10Q92851 521 aa2.49□□□□□ -2.01
UBR1-209ENST00000569243 SPSB1Q96BD6 273 aa2.49□□□□□ -2.01
UBR1-209ENST00000569243 B3GALT6Q96L58 329 aa2.49□□□□□ -2.01
UBR1-209ENST00000569243 LINC00615Q96LM1 132 aaPredicted RBP2.49□□□□□ -2.01
UBR1-209ENST00000569243 NUDT16L1Q9BRJ7 211 aaKnown RBP2.49□□□□□ -2.01
UBR1-209ENST00000569243 ADNPQ9H2P0 1102 aa2.49□□□□□ -2.01
UBR1-209ENST00000569243 TBC1D7Q9P0N9 293 aa2.49□□□□□ -2.01
UBR1-209ENST00000569243 TDRD6O60522 2096 aaKnown RBP2.49□□□□□ -2.01
UBR1-209ENST00000569243 F8VVB4 439 aa2.48□□□□□ -2.01
UBR1-209ENST00000569243 F8VWA3 439 aa2.48□□□□□ -2.01
UBR1-209ENST00000569243 CCDC188H7C350 402 aa2.48□□□□□ -2.01
UBR1-209ENST00000569243 SPRY1O43609 319 aaPredicted RBP2.48□□□□□ -2.01
UBR1-209ENST00000569243 ZNF354AO60765 605 aaPredicted RBP2.48□□□□□ -2.01
UBR1-209ENST00000569243 SH3BGRLO75368 114 aa2.48□□□□□ -2.01
UBR1-209ENST00000569243 LRCH4O75427 683 aa2.48□□□□□ -2.01
UBR1-209ENST00000569243 GSRP00390 522 aa2.48□□□□□ -2.01
UBR1-209ENST00000569243 ACHEP22303 614 aa2.48□□□□□ -2.01
UBR1-209ENST00000569243 PKLRP30613 574 aa2.48□□□□□ -2.01
UBR1-209ENST00000569243 GPR183P32249 361 aa2.48□□□□□ -2.01
UBR1-209ENST00000569243 CAPZA2P47755 286 aa2.48□□□□□ -2.01
UBR1-209ENST00000569243 KIAA0141Q14154 515 aaPredicted RBP2.48□□□□□ -2.01
UBR1-209ENST00000569243 NONOQ15233 471 aaKnown RBP eCLIP2.48□□□□□ -2.01
UBR1-209ENST00000569243 LETM2Q2VYF4 491 aa2.48□□□□□ -2.01
UBR1-209ENST00000569243 FAM106AQ4KMX7 169 aa2.48□□□□□ -2.01
UBR1-209ENST00000569243 SUSD4Q5VX71 490 aa2.48□□□□□ -2.01
UBR1-209ENST00000569243 KRT39Q6A163 491 aa2.48□□□□□ -2.01
UBR1-209ENST00000569243 NAA16Q6N069 864 aaPredicted RBP2.48□□□□□ -2.01
UBR1-209ENST00000569243 CFAP161Q6P656 301 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms