RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 ZCCHC10Q8TBK6 192 aa12.37□□□□□ -0.43
CNOT1-213ENST00000568158 EPS8L3Q8TE67 593 aaKnown RBP12.37□□□□□ -0.43
CNOT1-213ENST00000568158 MZB1Q8WU39 189 aa12.37□□□□□ -0.43
CNOT1-213ENST00000568158 MTBPQ96DY7 904 aa12.37□□□□□ -0.43
CNOT1-213ENST00000568158 PHF21BQ96EK2 531 aa12.37□□□□□ -0.43
CNOT1-213ENST00000568158 MMABQ96EY8 250 aaPredicted RBP12.37□□□□□ -0.43
CNOT1-213ENST00000568158 YIPF2Q9BWQ6 316 aa12.37□□□□□ -0.43
CNOT1-213ENST00000568158 CAPS2Q9BXY5 557 aa12.37□□□□□ -0.43
CNOT1-213ENST00000568158 GEMIN8Q9NWZ8 242 aaKnown RBP12.37□□□□□ -0.43
CNOT1-213ENST00000568158 GPRC5BQ9NZH0 403 aa12.37□□□□□ -0.43
CNOT1-213ENST00000568158 TMEM216Q9P0N5 145 aa12.37□□□□□ -0.43
CNOT1-213ENST00000568158 PSMC3IPQ9P2W1 217 aaPredicted RBP12.37□□□□□ -0.43
CNOT1-213ENST00000568158 ZNF490Q9ULM2 529 aaPredicted RBP12.37□□□□□ -0.43
CNOT1-213ENST00000568158 PTRH2Q9Y3E5 179 aaKnown RBP12.37□□□□□ -0.43
CNOT1-213ENST00000568158 CCDC189A1A4V9 331 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 K7EPI3 171 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 DNAJB6O75190 326 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 SIX3O95343 332 aaPredicted RBP12.36□□□□□ -0.43
CNOT1-213ENST00000568158 B3GALT4O96024 378 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 HNF4AP41235 474 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 ALDH18A1P54886 795 aaKnown RBP12.36□□□□□ -0.43
CNOT1-213ENST00000568158 CHIT1Q13231 466 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 FAM53BQ14153 422 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 SLBPQ14493 270 aaKnown RBP eCLIP12.36□□□□□ -0.43
CNOT1-213ENST00000568158 SETDB1Q15047 1291 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 NKG7Q16617 165 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 PDK4Q16654 411 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 NDUFA9Q16795 377 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 UGT8Q16880 541 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 SYT16Q17RD7 645 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 TSNAXIP1Q2TAA8 658 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 CRTC2Q53ET0 693 aaPredicted RBP12.36□□□□□ -0.43
CNOT1-213ENST00000568158 VWA2Q5GFL6 755 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 XKR6Q5GH73 641 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 TMEM214Q6NUQ4 689 aaKnown RBP12.36□□□□□ -0.43
CNOT1-213ENST00000568158 PRMT9Q6P2P2 845 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 TBC1D19Q8N5T2 526 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 TEX9Q8N6V9 391 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 EXD3Q8N9H8 876 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 OR9A4Q8NGU2 314 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 C17orf62Q9BQA9 187 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 KLHL31Q9H511 634 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 SOX17Q9H6I2 414 aaPredicted RBP12.36□□□□□ -0.43
CNOT1-213ENST00000568158 XPR1Q9UBH6 696 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 OPTCQ9UBM4 332 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 ZFP69BQ9UJL9 534 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 CDC14AQ9UNH5 594 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 SCN2AQ99250 2005 aa12.36□□□□□ -0.43
CNOT1-213ENST00000568158 LOC400499M0QZD8 3231 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 ITPR1Q14643 2758 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 NDUFS4O43181 175 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 ALBP02768 609 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 UMODP07911 640 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 CD63P08962 238 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 IL1RNP18510 177 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 CD22P20273 847 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 FBLP22087 321 aaKnown RBP12.35□□□□□ -0.43
CNOT1-213ENST00000568158 CXCR2P25025 360 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 OTX2P32243 289 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 AHRP35869 848 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 MAT1AQ00266 395 aaKnown RBP12.35□□□□□ -0.43
CNOT1-213ENST00000568158 IRF8Q02556 426 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 HYAL2Q12891 473 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 LY6DQ14210 128 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 SSPNQ14714 243 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 PCBP2Q15366 365 aaKnown RBP eCLIP12.35□□□□□ -0.439e-8■■■■□ 22.5
CNOT1-213ENST00000568158 SOWAHCQ53LP3 525 aaPredicted RBP12.35□□□□□ -0.43
CNOT1-213ENST00000568158 TMIGD1Q6UXZ0 262 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 SH2D5Q6ZV89 423 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 LRRC70Q7Z2Q7 622 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 LAPTM4BQ86VI4 370 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 TDRPQ86YL5 185 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 PRSS58Q8IYP2 241 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 PTGR2Q8N8N7 351 aaPredicted RBP12.35□□□□□ -0.43
CNOT1-213ENST00000568158 AMER3Q8N944 861 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 NT5CQ8TCD5 201 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 STT3BQ8TCJ2 826 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 ADAMTS17Q8TE56 1095 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 CREB3L4Q8TEY5 395 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 UBTD2Q8WUN7 234 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 CAVIN3Q969G5 261 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 CATSPER2Q96P56 530 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 UBL7Q96S82 380 aaPredicted RBP12.35□□□□□ -0.43
CNOT1-213ENST00000568158 MRPL57Q9BQC6 102 aaKnown RBP12.35□□□□□ -0.43
CNOT1-213ENST00000568158 ARHGAP9Q9BRR9 750 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 FAM117AQ9C073 453 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 AICDAQ9GZX7 198 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 DRC3Q9H069 523 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 NT5DC2Q9H857 520 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 CTSFQ9UBX1 484 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 RAB21Q9UL25 225 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 ANGPTL3Q9Y5C1 460 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 KCNMB2Q9Y691 235 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 MED13Q9UHV7 2174 aa12.35□□□□□ -0.43
CNOT1-213ENST00000568158 VSTM2BA6NLU5 285 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 SGK494L7N484 410 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 ERVH48-1M5A8F1 160 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 TK2O00142 265 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 SMIM24O75264 130 aa12.34□□□□□ -0.43
CNOT1-213ENST00000568158 WFS1O76024 890 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms