RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 MTRF1LQ9UGC7 380 aaKnown RBP12.87□□□□□ -0.35
SMG1-213ENST00000567737 LCMT1Q9UIC8 334 aa12.87□□□□□ -0.35
SMG1-213ENST00000567737 TRHDEQ9UKU6 1024 aa12.87□□□□□ -0.35
SMG1-213ENST00000567737 ACAD8Q9UKU7 415 aa12.87□□□□□ -0.35
SMG1-213ENST00000567737 DUSP10Q9Y6W6 482 aa12.87□□□□□ -0.35
SMG1-213ENST00000567737 HSPB2A8KAH6 182 aa12.86□□□□□ -0.35
SMG1-213ENST00000567737 FAM166BA8MTA8 275 aa12.86□□□□□ -0.35
SMG1-213ENST00000567737 ARHGEF33A8MVX0 844 aa12.86□□□□□ -0.35
SMG1-213ENST00000567737 KRT1P04264 644 aa12.86□□□□□ -0.35
SMG1-213ENST00000567737 PKMP14618 531 aaKnown RBP12.86□□□□□ -0.35
SMG1-213ENST00000567737 CCR7P32248 378 aa12.86□□□□□ -0.35
SMG1-213ENST00000567737 ADRA1AP35348 466 aa12.86□□□□□ -0.35
SMG1-213ENST00000567737 OR4D2P58180 307 aa12.86□□□□□ -0.35
SMG1-213ENST00000567737 MSLNQ13421 630 aaPredicted RBP12.86□□□□□ -0.35
SMG1-213ENST00000567737 ABRAXAS2Q15018 415 aa12.86□□□□□ -0.35
SMG1-213ENST00000567737 HSPB2Q16082 182 aa12.86□□□□□ -0.35
SMG1-213ENST00000567737 FBXL19-AS1Q494R0 122 aa12.86□□□□□ -0.35
SMG1-213ENST00000567737 LINC01559Q495D7 138 aa12.86□□□□□ -0.35
SMG1-213ENST00000567737 WLSQ5T9L3 541 aa12.86□□□□□ -0.35
SMG1-213ENST00000567737 RGS9BPQ6ZS82 235 aa12.86□□□□□ -0.35
SMG1-213ENST00000567737 KIF18BQ86Y91 864 aa12.86□□□□□ -0.35
SMG1-213ENST00000567737 RELL2Q8NC24 303 aaPredicted RBP12.86□□□□□ -0.35
SMG1-213ENST00000567737 ASZ1Q8WWH4 475 aa12.86□□□□□ -0.35
SMG1-213ENST00000567737 PIGTQ969N2 578 aa12.86□□□□□ -0.35
SMG1-213ENST00000567737 OR2A5Q96R48 311 aa12.86□□□□□ -0.35
SMG1-213ENST00000567737 ACAT2Q9BWD1 397 aa12.86□□□□□ -0.35
SMG1-213ENST00000567737 TSSK1BQ9BXA7 367 aa12.86□□□□□ -0.35
SMG1-213ENST00000567737 GBA3Q9H227 469 aa12.86□□□□□ -0.35
SMG1-213ENST00000567737 UTP6Q9NYH9 597 aaKnown RBP12.86□□□□□ -0.35
SMG1-213ENST00000567737 HCN3Q9P1Z3 774 aa12.86□□□□□ -0.35
SMG1-213ENST00000567737 MRFAP1Q9Y605 127 aa12.86□□□□□ -0.35
SMG1-213ENST00000567737 A0A1W2PPV9 198 aa12.85□□□□□ -0.35
SMG1-213ENST00000567737 LRRC10BA6NIK2 292 aa12.85□□□□□ -0.35
SMG1-213ENST00000567737 SLC16A5O15375 505 aa12.85□□□□□ -0.35
SMG1-213ENST00000567737 DNAJB6O75190 326 aa12.85□□□□□ -0.35
SMG1-213ENST00000567737 NSA2O95478 260 aaKnown RBP12.85□□□□□ -0.35
SMG1-213ENST00000567737 HRGP04196 525 aa12.85□□□□□ -0.35
SMG1-213ENST00000567737 TUBB4AP04350 444 aa12.85□□□□□ -0.35
SMG1-213ENST00000567737 APOA4P06727 396 aa12.85□□□□□ -0.35
SMG1-213ENST00000567737 GABRA1P14867 456 aa12.85□□□□□ -0.35
SMG1-213ENST00000567737 BMP5P22003 454 aa12.85□□□□□ -0.35
SMG1-213ENST00000567737 PCGF5Q86SE9 256 aa12.85□□□□□ -0.35
SMG1-213ENST00000567737 SLC22A16Q86VW1 577 aa12.85□□□□□ -0.35
SMG1-213ENST00000567737 TMEM156Q8N614 296 aa12.85□□□□□ -0.35
SMG1-213ENST00000567737 GSDMBQ8TAX9 411 aa12.85□□□□□ -0.35
SMG1-213ENST00000567737 LINC01560Q8TB33 94 aa12.85□□□□□ -0.35
SMG1-213ENST00000567737 CDKN2AIPNLQ96HQ2 116 aa12.85□□□□□ -0.35
SMG1-213ENST00000567737 ZDHHC11Q9H8X9 412 aa12.85□□□□□ -0.35
SMG1-213ENST00000567737 SYNPO2LQ9H987 977 aa12.85□□□□□ -0.35
SMG1-213ENST00000567737 TIMMDC1Q9NPL8 285 aa12.85□□□□□ -0.35
SMG1-213ENST00000567737 NLE1Q9NVX2 485 aaPredicted RBP12.85□□□□□ -0.35
SMG1-213ENST00000567737 PCYOX1Q9UHG3 505 aa12.85□□□□□ -0.35
SMG1-213ENST00000567737 AAR2Q9Y312 384 aaKnown RBP12.85□□□□□ -0.35
SMG1-213ENST00000567737 AQP7O14520 342 aa12.84□□□□□ -0.35
SMG1-213ENST00000567737 P2RX6O15547 441 aa12.84□□□□□ -0.35
SMG1-213ENST00000567737 GPC4O75487 556 aa12.84□□□□□ -0.35
SMG1-213ENST00000567737 EZRP15311 586 aaKnown RBP12.84□□□□□ -0.35
SMG1-213ENST00000567737 PECAM1P16284 738 aaPredicted RBP12.84□□□□□ -0.35
SMG1-213ENST00000567737 BDKRB1P46663 353 aa12.84□□□□□ -0.35
SMG1-213ENST00000567737 PRPSAP1Q14558 356 aa12.84□□□□□ -0.35
SMG1-213ENST00000567737 ITPRIPL1Q6GPH6 555 aa12.84□□□□□ -0.35
SMG1-213ENST00000567737 MDGA2Q7Z553 956 aa12.84□□□□□ -0.35
SMG1-213ENST00000567737 SHISA5Q8N114 240 aa12.84□□□□□ -0.35
SMG1-213ENST00000567737 PLPP5Q8NEB5 264 aa12.84□□□□□ -0.35
SMG1-213ENST00000567737 SARAFQ96BY9 339 aa12.84□□□□□ -0.35
SMG1-213ENST00000567737 GORASP1Q9BQQ3 440 aa12.84□□□□□ -0.35
SMG1-213ENST00000567737 CHMP5Q9NZZ3 219 aa12.84□□□□□ -0.35
SMG1-213ENST00000567737 UVRAGQ9P2Y5 699 aa12.84□□□□□ -0.35
SMG1-213ENST00000567737 FEZ2Q9UHY8 353 aaPredicted RBP12.84□□□□□ -0.35
SMG1-213ENST00000567737 LIPGQ9Y5X9 500 aa12.84□□□□□ -0.35
SMG1-213ENST00000567737 DNAJC13O75165 2243 aa12.84□□□□□ -0.35
SMG1-213ENST00000567737 ZANQ9Y493 2812 aa12.83□□□□□ -0.36
SMG1-213ENST00000567737 A0A1B0GVC2 190 aa12.83□□□□□ -0.36
SMG1-213ENST00000567737 MAGEB17A8MXT2 336 aa12.83□□□□□ -0.36
SMG1-213ENST00000567737 CLDN4O14493 209 aa12.83□□□□□ -0.36
SMG1-213ENST00000567737 CDC123O75794 336 aaPredicted RBP12.83□□□□□ -0.36
SMG1-213ENST00000567737 C1orf105O95561 183 aa12.83□□□□□ -0.36
SMG1-213ENST00000567737 CNOT4O95628 575 aaKnown RBP12.83□□□□□ -0.36
SMG1-213ENST00000567737 IGHG3P01860 377 aa12.83□□□□□ -0.36
SMG1-213ENST00000567737 MSNP26038 577 aaKnown RBP12.83□□□□□ -0.36
SMG1-213ENST00000567737 MAN2A2P49641 1150 aa12.83□□□□□ -0.36
SMG1-213ENST00000567737 MPP1Q00013 466 aa12.83□□□□□ -0.36
SMG1-213ENST00000567737 RHAGQ02094 409 aa12.83□□□□□ -0.36
SMG1-213ENST00000567737 DMTNQ08495 405 aa12.83□□□□□ -0.36
SMG1-213ENST00000567737 TFDP2Q14188 446 aa12.83□□□□□ -0.36
SMG1-213ENST00000567737 TMED2Q15363 201 aa12.83□□□□□ -0.36
SMG1-213ENST00000567737 NFKBIBQ15653 356 aa12.83□□□□□ -0.36
SMG1-213ENST00000567737 CCSMST1Q4G0I0 132 aa12.83□□□□□ -0.36
SMG1-213ENST00000567737 TRILQ7L0X0 811 aa12.83□□□□□ -0.36
SMG1-213ENST00000567737 PRSS41Q7RTY9 318 aa12.83□□□□□ -0.36
SMG1-213ENST00000567737 STYXQ8WUJ0 223 aa12.83□□□□□ -0.36
SMG1-213ENST00000567737 SKA2Q8WVK7 121 aaPredicted RBP12.83□□□□□ -0.36
SMG1-213ENST00000567737 P3H4Q92791 437 aa12.83□□□□□ -0.36
SMG1-213ENST00000567737 TSLPQ969D9 159 aa12.83□□□□□ -0.36
SMG1-213ENST00000567737 LRRC45Q96CN5 670 aa12.83□□□□□ -0.36
SMG1-213ENST00000567737 PERPQ96FX8 193 aa12.83□□□□□ -0.36
SMG1-213ENST00000567737 ALS2CR12Q96Q35 445 aa12.83□□□□□ -0.36
SMG1-213ENST00000567737 TTC1Q99614 292 aa12.83□□□□□ -0.36
SMG1-213ENST00000567737 TBL1YQ9BQ87 522 aa12.83□□□□□ -0.36
SMG1-213ENST00000567737 DEFB126Q9BYW3 111 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms