RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 FFAR3O14843 346 aa17.59■□□□□ 0.41
LINC01238-205ENST00000567549 GPR42O15529 346 aa17.59■□□□□ 0.41
LINC01238-205ENST00000567549 P2RX6O15547 441 aa17.59■□□□□ 0.41
LINC01238-205ENST00000567549 WDPCPO95876 746 aa17.59■□□□□ 0.41
LINC01238-205ENST00000567549 ENO2P09104 434 aaPredicted RBP17.59■□□□□ 0.41
LINC01238-205ENST00000567549 ITGAMP11215 1152 aa17.59■□□□□ 0.41
LINC01238-205ENST00000567549 CCR8P51685 355 aa17.59■□□□□ 0.41
LINC01238-205ENST00000567549 MAT1AQ00266 395 aaKnown RBP17.59■□□□□ 0.41
LINC01238-205ENST00000567549 MEF2AQ02078 507 aaPredicted RBP17.59■□□□□ 0.41
LINC01238-205ENST00000567549 ACTN3Q08043 901 aaPredicted RBP17.59■□□□□ 0.41
LINC01238-205ENST00000567549 RGS1Q08116 209 aa17.59■□□□□ 0.41
LINC01238-205ENST00000567549 MEP1AQ16819 746 aa17.59■□□□□ 0.41
LINC01238-205ENST00000567549 DUPD1Q68J44 220 aa17.59■□□□□ 0.41
LINC01238-205ENST00000567549 ZNF787Q6DD87 383 aa17.59■□□□□ 0.41
LINC01238-205ENST00000567549 TMEM214Q6NUQ4 689 aaKnown RBP17.59■□□□□ 0.41
LINC01238-205ENST00000567549 PLD3Q8IV08 490 aa17.59■□□□□ 0.41
LINC01238-205ENST00000567549 SLC5A8Q8N695 610 aa17.59■□□□□ 0.41
LINC01238-205ENST00000567549 EEF1AKMT1Q8WVE0 214 aa17.59■□□□□ 0.41
LINC01238-205ENST00000567549 MOCOSQ96EN8 888 aa17.59■□□□□ 0.41
LINC01238-205ENST00000567549 RUNDC3BQ96NL0 473 aa17.59■□□□□ 0.41
LINC01238-205ENST00000567549 LPAR4Q99677 370 aa17.59■□□□□ 0.41
LINC01238-205ENST00000567549 CLK4Q9HAZ1 481 aaKnown RBP17.59■□□□□ 0.41
LINC01238-205ENST00000567549 ARL15Q9NXU5 204 aa17.59■□□□□ 0.41
LINC01238-205ENST00000567549 PLA2G3Q9NZ20 509 aa17.59■□□□□ 0.41
LINC01238-205ENST00000567549 PDE10AQ9Y233 779 aa17.59■□□□□ 0.41
LINC01238-205ENST00000567549 MED16Q9Y2X0 877 aa17.59■□□□□ 0.41
LINC01238-205ENST00000567549 SCN2AQ99250 2005 aa17.59■□□□□ 0.41
LINC01238-205ENST00000567549 USP27XA6NNY8 438 aa17.58■□□□□ 0.4
LINC01238-205ENST00000567549 TTI1O43156 1089 aa17.58■□□□□ 0.4
LINC01238-205ENST00000567549 IL1RNP18510 177 aa17.58■□□□□ 0.4
LINC01238-205ENST00000567549 CSNK1G2P78368 415 aa17.58■□□□□ 0.4
LINC01238-205ENST00000567549 MPP1Q00013 466 aa17.58■□□□□ 0.4
LINC01238-205ENST00000567549 NAE1Q13564 534 aa17.58■□□□□ 0.4
LINC01238-205ENST00000567549 PWP1Q13610 501 aa17.58■□□□□ 0.4
LINC01238-205ENST00000567549 SYT16Q17RD7 645 aa17.58■□□□□ 0.4
LINC01238-205ENST00000567549 ZNF324BQ6AW86 544 aaPredicted RBP17.58■□□□□ 0.4
LINC01238-205ENST00000567549 RPTNQ6XPR3 784 aa17.58■□□□□ 0.4
LINC01238-205ENST00000567549 ABHD13Q7L211 337 aa17.58■□□□□ 0.4
LINC01238-205ENST00000567549 FJX1Q86VR8 437 aa17.58■□□□□ 0.4
LINC01238-205ENST00000567549 PDIK1LQ8N165 341 aa17.58■□□□□ 0.4
LINC01238-205ENST00000567549 TMEM178AQ8NBL3 297 aa17.58■□□□□ 0.4
LINC01238-205ENST00000567549 M1APQ8TC57 530 aa17.58■□□□□ 0.4
LINC01238-205ENST00000567549 ALKBH8Q96BT7 664 aaKnown RBP17.58■□□□□ 0.4
LINC01238-205ENST00000567549 SGPP1Q9BX95 441 aa17.58■□□□□ 0.4
LINC01238-205ENST00000567549 KCNK13Q9HB14 408 aa17.58■□□□□ 0.4
LINC01238-205ENST00000567549 PPANQ9NQ55 473 aaKnown RBP17.58■□□□□ 0.4
LINC01238-205ENST00000567549 COPG2Q9UBF2 871 aa17.58■□□□□ 0.4
LINC01238-205ENST00000567549 SEC14L3Q9UDX4 400 aa17.58■□□□□ 0.4
LINC01238-205ENST00000567549 NEU2Q9Y3R4 380 aa17.58■□□□□ 0.4
LINC01238-205ENST00000567549 CREBBPQ92793 2442 aa17.57■□□□□ 0.4
LINC01238-205ENST00000567549 A8MUI8 341 aa17.57■□□□□ 0.4
LINC01238-205ENST00000567549 NDC80O14777 642 aa17.57■□□□□ 0.4
LINC01238-205ENST00000567549 SEC24DO94855 1032 aaPredicted RBP17.57■□□□□ 0.4
LINC01238-205ENST00000567549 DHX9Q08211 1270 aaKnown RBP17.57■□□□□ 0.4
LINC01238-205ENST00000567549 NSDHLQ15738 373 aa17.57■□□□□ 0.4
LINC01238-205ENST00000567549 RNASEH2BQ5TBB1 312 aaKnown RBP17.57■□□□□ 0.4
LINC01238-205ENST00000567549 FAM45BPQ6NSW5 357 aa17.57■□□□□ 0.4
LINC01238-205ENST00000567549 SYDE1Q6ZW31 735 aaPredicted RBP17.57■□□□□ 0.4
LINC01238-205ENST00000567549 VN1R4Q7Z5H5 301 aa17.57■□□□□ 0.4
LINC01238-205ENST00000567549 STRA8Q7Z7C7 330 aa17.57■□□□□ 0.4
LINC01238-205ENST00000567549 TICAM1Q8IUC6 712 aa17.57■□□□□ 0.4
LINC01238-205ENST00000567549 CNTN4Q8IWV2 1026 aa17.57■□□□□ 0.4
LINC01238-205ENST00000567549 LGI4Q8N135 537 aa17.57■□□□□ 0.4
LINC01238-205ENST00000567549 MFSD9Q8NBP5 474 aa17.57■□□□□ 0.4
LINC01238-205ENST00000567549 FAM45AQ8TCE6 357 aa17.57■□□□□ 0.4
LINC01238-205ENST00000567549 LRRC39Q96DD0 335 aa17.57■□□□□ 0.4
LINC01238-205ENST00000567549 TM4SF19Q96DZ7 209 aa17.57■□□□□ 0.4
LINC01238-205ENST00000567549 LINGO1Q96FE5 620 aa17.57■□□□□ 0.4
LINC01238-205ENST00000567549 MS4A14Q96JA4 679 aa17.57■□□□□ 0.4
LINC01238-205ENST00000567549 OSBPL9Q96SU4 736 aa17.57■□□□□ 0.4
LINC01238-205ENST00000567549 UTP23Q9BRU9 249 aaKnown RBP17.57■□□□□ 0.4
LINC01238-205ENST00000567549 HCN3Q9P1Z3 774 aa17.57■□□□□ 0.4
LINC01238-205ENST00000567549 MAGEB17A8MXT2 336 aa17.56■□□□□ 0.4
LINC01238-205ENST00000567549 DNALI1O14645 258 aaPredicted RBP17.56■□□□□ 0.4
LINC01238-205ENST00000567549 ZG16O60844 167 aa17.56■□□□□ 0.4
LINC01238-205ENST00000567549 UNC5CO95185 931 aa17.56■□□□□ 0.4
LINC01238-205ENST00000567549 CD46P15529 392 aa17.56■□□□□ 0.4
LINC01238-205ENST00000567549 TDGF1P3P51864 188 aa17.56■□□□□ 0.4
LINC01238-205ENST00000567549 ART3Q13508 389 aa17.56■□□□□ 0.4
LINC01238-205ENST00000567549 CSHL1Q14406 222 aa17.56■□□□□ 0.4
LINC01238-205ENST00000567549 KRTCAP3Q53RY4 240 aa17.56■□□□□ 0.4
LINC01238-205ENST00000567549 ZNF766Q5HY98 468 aa17.56■□□□□ 0.4
LINC01238-205ENST00000567549 ACER2Q5QJU3 275 aa17.56■□□□□ 0.4
LINC01238-205ENST00000567549 PAQR3Q6TCH7 311 aa17.56■□□□□ 0.4
LINC01238-205ENST00000567549 SLC26A11Q86WA9 606 aa17.56■□□□□ 0.4
LINC01238-205ENST00000567549 EID3Q8N140 333 aa17.56■□□□□ 0.4
LINC01238-205ENST00000567549 PLPP5Q8NEB5 264 aa17.56■□□□□ 0.4
LINC01238-205ENST00000567549 ARMC2Q8NEN0 867 aa17.56■□□□□ 0.4
LINC01238-205ENST00000567549 ABHD11Q8NFV4 315 aa17.56■□□□□ 0.4
LINC01238-205ENST00000567549 ZCCHC10Q8TBK6 192 aa17.56■□□□□ 0.4
LINC01238-205ENST00000567549 CERS2Q96G23 380 aa17.56■□□□□ 0.4
LINC01238-205ENST00000567549 C16orf45Q96MC5 204 aaPredicted RBP17.56■□□□□ 0.4
LINC01238-205ENST00000567549 NDNQ99608 321 aa17.56■□□□□ 0.4
LINC01238-205ENST00000567549 MESP1Q9BRJ9 268 aa17.56■□□□□ 0.4
LINC01238-205ENST00000567549 SARGQ9BW04 601 aa17.56■□□□□ 0.4
LINC01238-205ENST00000567549 ATG10Q9H0Y0 220 aa17.56■□□□□ 0.4
LINC01238-205ENST00000567549 MMP25Q9NPA2 562 aa17.56■□□□□ 0.4
LINC01238-205ENST00000567549 CHST11Q9NPF2 352 aa17.56■□□□□ 0.4
LINC01238-205ENST00000567549 KLF2Q9Y5W3 355 aaPredicted RBP17.56■□□□□ 0.4
LINC01238-205ENST00000567549 TRGV8A0A0C4DH27 118 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms