RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 MEF2AQ02078 507 aaPredicted RBP17.31■□□□□ 0.36
USB1-213ENST00000566292 STEAP4Q687X5 459 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 DUPD1Q68J44 220 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 CAPN13Q6MZZ7 669 aaPredicted RBP17.31■□□□□ 0.36
USB1-213ENST00000566292 HIBCHQ6NVY1 386 aaPredicted RBP17.31■□□□□ 0.36
USB1-213ENST00000566292 MAMDC2Q7Z304 686 aaPredicted RBP17.31■□□□□ 0.36
USB1-213ENST00000566292 CREG2Q8IUH2 290 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 KLHL7Q8IXQ5 586 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 PDIK1LQ8N165 341 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 MFSD9Q8NBP5 474 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 ABHD11Q8NFV4 315 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 OR56A3Q8NH54 315 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 SLC13A3Q8WWT9 602 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 HIST1H2AHQ96KK5 128 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 OR4K3Q96R72 315 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 CYTH2Q99418 400 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 HIST1H2AJQ99878 128 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 SLX1AQ9BQ83 275 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 TRIM51Q9BSJ1 452 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 H2AFJQ9BTM1 129 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 TUBB6Q9BUF5 446 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 ARL15Q9NXU5 204 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 IKZF3Q9UKT9 509 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 VWA7Q9Y334 891 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 ITPR2Q14571 2701 aa17.31■□□□□ 0.36
USB1-213ENST00000566292 TP73O15350 636 aa17.3■□□□□ 0.36
USB1-213ENST00000566292 RDH16O75452 317 aa17.3■□□□□ 0.36
USB1-213ENST00000566292 SEC24DO94855 1032 aaPredicted RBP17.3■□□□□ 0.36
USB1-213ENST00000566292 WDPCPO95876 746 aa17.3■□□□□ 0.36
USB1-213ENST00000566292 ICAM2P13598 275 aa17.3■□□□□ 0.36
USB1-213ENST00000566292 COL8A1P27658 744 aa17.3■□□□□ 0.36
USB1-213ENST00000566292 MINDY4Q4G0A6 757 aa17.3■□□□□ 0.36
USB1-213ENST00000566292 MFSD4BQ5TF39 518 aa17.3■□□□□ 0.36
USB1-213ENST00000566292 ZNF324BQ6AW86 544 aaPredicted RBP17.3■□□□□ 0.36
USB1-213ENST00000566292 FAM45BPQ6NSW5 357 aa17.3■□□□□ 0.36
USB1-213ENST00000566292 FAM180AQ6UWF9 173 aa17.3■□□□□ 0.36
USB1-213ENST00000566292 SYDE1Q6ZW31 735 aaPredicted RBP17.3■□□□□ 0.36
USB1-213ENST00000566292 CPEB2Q7Z5Q1 589 aaKnown RBP17.3■□□□□ 0.36
USB1-213ENST00000566292 OR4K1Q8NGD4 311 aa17.3■□□□□ 0.36
USB1-213ENST00000566292 FAM45AQ8TCE6 357 aa17.3■□□□□ 0.36
USB1-213ENST00000566292 METTL21AQ8WXB1 218 aa17.3■□□□□ 0.36
USB1-213ENST00000566292 MOCOSQ96EN8 888 aa17.3■□□□□ 0.36
USB1-213ENST00000566292 TAAR6Q96RI8 345 aa17.3■□□□□ 0.36
USB1-213ENST00000566292 HAUS8Q9BT25 410 aa17.3■□□□□ 0.36
USB1-213ENST00000566292 SARGQ9BW04 601 aa17.3■□□□□ 0.36
USB1-213ENST00000566292 ANKHQ9HCJ1 492 aa17.3■□□□□ 0.36
USB1-213ENST00000566292 CORO1CQ9ULV4 474 aaPredicted RBP17.3■□□□□ 0.36
USB1-213ENST00000566292 CRYBG3Q68DQ2 2970 aa17.29■□□□□ 0.36
USB1-213ENST00000566292 TRAV17A0A0B4J275 112 aa17.29■□□□□ 0.36
USB1-213ENST00000566292 GUCA1CO95843 209 aa17.29■□□□□ 0.36
USB1-213ENST00000566292 CYC1P08574 325 aa17.29■□□□□ 0.36
USB1-213ENST00000566292 GRK3P35626 688 aa17.29■□□□□ 0.36
USB1-213ENST00000566292 CCR8P51685 355 aa17.29■□□□□ 0.36
USB1-213ENST00000566292 ITGA8P53708 1063 aa17.29■□□□□ 0.36
USB1-213ENST00000566292 AP1S2P56377 157 aa17.29■□□□□ 0.36
USB1-213ENST00000566292 DR1Q01658 176 aa17.29■□□□□ 0.36
USB1-213ENST00000566292 SBSNQ6UWP8 590 aa17.29■□□□□ 0.36
USB1-213ENST00000566292 TMEM207Q6UWW9 146 aa17.29■□□□□ 0.36
USB1-213ENST00000566292 BCORP1Q8N888 145 aa17.29■□□□□ 0.36
USB1-213ENST00000566292 FBXL8Q96CD0 374 aa17.29■□□□□ 0.36
USB1-213ENST00000566292 LRRC39Q96DD0 335 aa17.29■□□□□ 0.36
USB1-213ENST00000566292 SNF8Q96H20 258 aa17.29■□□□□ 0.36
USB1-213ENST00000566292 MAGEB10Q96LZ2 347 aaPredicted RBP17.29■□□□□ 0.36
USB1-213ENST00000566292 FAM129AQ9BZQ8 928 aa17.29■□□□□ 0.36
USB1-213ENST00000566292 RNF32Q9H0A6 362 aa17.29■□□□□ 0.36
USB1-213ENST00000566292 SPNS1Q9H2V7 528 aa17.29■□□□□ 0.36
USB1-213ENST00000566292 OLAHQ9NV23 265 aa17.29■□□□□ 0.36
USB1-213ENST00000566292 OSGIN2Q9Y236 505 aa17.29■□□□□ 0.36
USB1-213ENST00000566292 NAALAD2Q9Y3Q0 740 aa17.29■□□□□ 0.36
USB1-213ENST00000566292 PSAT1Q9Y617 370 aa17.29■□□□□ 0.36
USB1-213ENST00000566292 SLC22A7Q9Y694 548 aa17.29■□□□□ 0.36
USB1-213ENST00000566292 ZNF860A6NHJ4 632 aa17.28■□□□□ 0.36
USB1-213ENST00000566292 TTI1O43156 1089 aa17.28■□□□□ 0.36
USB1-213ENST00000566292 SEC31AO94979 1220 aaKnown RBP17.28■□□□□ 0.36
USB1-213ENST00000566292 UQCRHP07919 91 aa17.28■□□□□ 0.36
USB1-213ENST00000566292 SLC35G6P0C7Q6 338 aa17.28■□□□□ 0.36
USB1-213ENST00000566292 TDGF1P3P51864 188 aa17.28■□□□□ 0.36
USB1-213ENST00000566292 AP2B1P63010 937 aa17.28■□□□□ 0.36
USB1-213ENST00000566292 CATSPEREQ5SY80 951 aa17.28■□□□□ 0.36
USB1-213ENST00000566292 ANKRD37Q7Z713 158 aa17.28■□□□□ 0.36
USB1-213ENST00000566292 ANKMY2Q8IV38 441 aa17.28■□□□□ 0.36
USB1-213ENST00000566292 AFAP1L2Q8N4X5 818 aa17.28■□□□□ 0.36
USB1-213ENST00000566292 ZNF740Q8NDX6 193 aa17.28■□□□□ 0.36
USB1-213ENST00000566292 OR5T3Q8NGG3 340 aa17.28■□□□□ 0.36
USB1-213ENST00000566292 PDLIM5Q96HC4 596 aaKnown RBP17.28■□□□□ 0.36
USB1-213ENST00000566292 RBCK1Q9BYM8 510 aa17.28■□□□□ 0.36
USB1-213ENST00000566292 TRIM54Q9BYV2 358 aa17.28■□□□□ 0.36
USB1-213ENST00000566292 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.28■□□□□ 0.36
USB1-213ENST00000566292 C19orf25Q9UFG5 118 aaPredicted RBP17.28■□□□□ 0.36
USB1-213ENST00000566292 CELSR2Q9HCU4 2923 aa17.27■□□□□ 0.36
USB1-213ENST00000566292 TRBC2A0A5B9 178 aa17.27■□□□□ 0.36
USB1-213ENST00000566292 NDUFS4O43181 175 aa17.27■□□□□ 0.36
USB1-213ENST00000566292 LRRTM2O43300 516 aa17.27■□□□□ 0.36
USB1-213ENST00000566292 OR1F1O43749 312 aa17.27■□□□□ 0.36
USB1-213ENST00000566292 DNAJB6O75190 326 aa17.27■□□□□ 0.36
USB1-213ENST00000566292 ENO2P09104 434 aaPredicted RBP17.27■□□□□ 0.36
USB1-213ENST00000566292 ZNF37AP17032 561 aaPredicted RBP17.27■□□□□ 0.36
USB1-213ENST00000566292 ARL4CP56559 192 aa17.27■□□□□ 0.36
USB1-213ENST00000566292 GNG11P61952 73 aa17.27■□□□□ 0.36
USB1-213ENST00000566292 RHAGQ02094 409 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms