RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 CCNG2Q16589 344 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 MINDY4Q4G0A6 757 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 SYTL3Q4VX76 610 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 DNAJC21Q5F1R6 531 aaKnown RBP8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 FBXO42Q6P3S6 717 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 LRRC8BQ6P9F7 803 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 TTC23LQ6PF05 361 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 DRICH1Q6PGQ1 229 aaPredicted RBP8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 TAS2R42Q7RTR8 314 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 YTHDF3Q7Z739 585 aaKnown RBP8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 ZC3H7AQ8IWR0 971 aaKnown RBP8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 CLDN19Q8N6F1 224 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 AMER3Q8N944 861 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 LINC01555Q8NAE3 123 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 IPMKQ8NFU5 416 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 OR52N2Q8NGI0 321 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 OR2L8Q8NGY9 312 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 ACTL9Q8TC94 416 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 ACTRT1Q8TDG2 376 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 MRGPRX2Q96LB1 330 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 C10orf90Q96M02 699 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 PPP1R2P1Q96PQ5 205 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 OSBPL9Q96SU4 736 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 FICDQ9BVA6 458 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 VN1R1Q9GZP7 353 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 PNPLA3Q9NST1 481 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 TRHDEQ9UKU6 1024 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 SNX12Q9UMY4 172 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 KLK4Q9Y5K2 254 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 SAR1BQ9Y6B6 198 aa8.49□□□□□ -1.05
VPS9D1-205ENST00000565452 A0A0A6YYC8 382 aaPredicted RBP8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 HSPB2A8KAH6 182 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 H0YGG7 62 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 H7C0C1 242 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 I3L1I5 382 aaPredicted RBP8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 CLDN4O14493 209 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 TXNDC9O14530 226 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 CEP104O60308 925 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 DNAJB6O75190 326 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 VPS26AO75436 327 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 STK10O94804 968 aaKnown RBP8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 FGGP02679 453 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 RBP3P10745 1247 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 CASQ1P31415 396 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 TRHRP34981 398 aaPredicted RBP8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 PAFAH1B1P43034 410 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 AVPR1BP47901 424 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 ATP5OP48047 213 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 ITGA8P53708 1063 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 EIF3EP60228 445 aaKnown RBP8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 ARF3P61204 181 aaPredicted RBP8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 MPP3Q13368 585 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 PTK6Q13882 451 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 HSPB2Q16082 182 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 ZNF468Q5VIY5 522 aaPredicted RBP8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 NPNTQ6UXI9 565 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 C4orf22Q6V702 233 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 RGS9BPQ6ZS82 235 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 LANCL3Q6ZV70 420 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 PID1Q7Z2X4 250 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 ANKRD37Q7Z713 158 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 TAX1BP1Q86VP1 789 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 SERPINA9Q86WD7 417 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 CDKL3Q8IVW4 592 aaPredicted RBP8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 VWA5B2Q8N398 1253 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 RAB42Q8N4Z0 105 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 ZFP62Q8NB50 900 aaPredicted RBP8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 MCOLN3Q8TDD5 553 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 ZNF592Q92610 1267 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 LPAR4Q99677 370 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 MIPEPQ99797 713 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 C19orf43Q9BQ61 176 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 FSD1LQ9BXM9 530 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 DRC3Q9H069 523 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 SMARCAL1Q9NZC9 954 aa8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 MTRF1LQ9UGC7 380 aaKnown RBP8.48□□□□□ -1.05
VPS9D1-205ENST00000565452 SLC5A10A0PJK1 596 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 TRIM64A6NGJ6 449 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 TRIM64BA6NI03 449 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 CLCA1A8K7I4 914 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 F8W8V4 182 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 PGRMC1O00264 195 aaKnown RBP8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 FCHO1O14526 889 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 WDR1O75083 606 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 PHF2O75151 1096 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 AGTP01019 485 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 PECAM1P16284 738 aaPredicted RBP8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 NFKB1P19838 968 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 TACR1P25103 407 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 ACRV1P26436 265 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 TPP2P29144 1249 aaPredicted RBP8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 CD68P34810 354 aaPredicted RBP8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 ADH7P40394 386 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 ASCL1P50553 236 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 MLF1P58340 268 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 PPIAP62937 165 aaKnown RBP8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 FAM53BQ14153 422 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 NDUFA9Q16795 377 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 SYT16Q17RD7 645 aa8.47□□□□□ -1.05
VPS9D1-205ENST00000565452 RIPPLY2Q5TAB7 128 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms