RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 CCDC88CQ9P219 2028 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 SRP72O76094 671 aaKnown RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 MT-ND2P03891 347 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 NR2F6P10588 404 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 IGFBP4P22692 258 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 MNX1P50219 401 aaPredicted RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 HTR6P50406 440 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 NDST2P52849 883 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 GPR33Q49SQ1 333 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 HLA-DQA1Q5Y7H0 255 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 CENPLQ8N0S6 344 aaPredicted RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 CDYL2Q8N8U2 506 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 OR8K5Q8NH50 307 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 CLP1Q92989 425 aaKnown RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 MED8Q96G25 268 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 ADI1Q9BV57 179 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 KLHL31Q9H511 634 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 SLC28A3Q9HAS3 691 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 GPN3Q9UHW5 284 aaPredicted RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 GPR160Q9UJ42 338 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 ACOT9Q9Y305 439 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 PLLPQ9Y342 182 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 CAB39Q9Y376 341 aaPredicted RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 LRRC72A6NJI9 287 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 TLL1O43897 1013 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 WFS1O76024 890 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 MATN4O95460 622 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 MT-CO2P00403 227 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 FGBP02675 491 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 BMP7P18075 431 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 MC4RP32245 332 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 GRIA3P42263 894 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 ETV4P43268 484 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 SRP54P61011 504 aaKnown RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 HSF2Q03933 536 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 LARS2Q15031 903 aaKnown RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 RABL3Q5HYI8 236 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 COLEC12Q5KU26 742 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 LDLRAP1Q5SW96 308 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 YOD1Q5VVQ6 348 aaPredicted RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 ACSM2BQ68CK6 577 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 SZRD1Q7Z422 152 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 PIGWQ7Z7B1 504 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 CCDC54Q8NEL0 328 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 OR13J1Q8NGT2 312 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 METTL21AQ8WXB1 218 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 PROX1Q92786 737 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 CORO2AQ92828 525 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 RCN3Q96D15 328 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 PHB2Q99623 299 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 GPR21Q99679 349 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 CNPPD1Q9BV87 410 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 TMEM109Q9BVC6 243 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 ASPNQ9BXN1 380 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 EIF2B4Q9UI10 523 aaKnown RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 PLEKHA6Q9Y2H5 1048 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 AP4B1Q9Y6B7 739 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 SLCO1B1Q9Y6L6 691 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 TRPM7Q96QT4 1865 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 CACNB4O00305 520 aaPredicted RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 PTHP01270 115 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 PRKACGP22612 351 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 FXNQ16595 210 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 COQ5Q5HYK3 327 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 ZNF549Q6P9A3 640 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 CHSY3Q70JA7 882 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 ABHD13Q7L211 337 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 OFCC1Q8IZS5 231 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 AKAP1Q92667 903 aaKnown RBP eCLIP3.25□□□□□ -1.89
CHD9-213ENST00000564845 CDRT15Q96T59 188 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 FAM126AQ9BYI3 521 aaPredicted RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 LAMP3Q9UQV4 416 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 SUPT3HB4E1H0 165 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 RAMP2O60895 175 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 STC2O76061 302 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 EFEMP2O95967 443 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 UGT2B4P06133 528 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 CCDC159P0C7I6 412 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 UBCP0CG48 685 aaKnown RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 HOXB3P14651 431 aaPredicted RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 PGAM1P18669 254 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 ETV3P41162 512 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 MS4A2Q01362 244 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 GTDC1Q4AE62 458 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 PTRHD1Q6GMV3 140 aaKnown RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 CRYBG2Q8N1P7 616 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 SGCDQ92629 289 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 DUSP23Q9BVJ7 150 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 UCK2Q9BZX2 261 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 NGBQ9NPG2 151 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 TAS2R7Q9NYW3 318 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 WASF3Q9UPY6 502 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 KCNE2Q9Y6J6 123 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 C1orf232A0A0U1RR37 186 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 FAM86C2PA6NEL3 165 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 CREBL2O60519 120 aaPredicted RBP3.25□□□□□ -1.89
CHD9-213ENST00000564845 PDHA2P29803 388 aa3.25□□□□□ -1.89
CHD9-213ENST00000564845 AGTR1P30556 359 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms