RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 TMEM214Q6NUQ4 689 aaKnown RBP17.41■□□□□ 0.38
SYNGR3-204ENST00000564642 NXPE4Q6UWF7 544 aa17.41■□□□□ 0.38
SYNGR3-204ENST00000564642 KIRREL2Q6UWL6 708 aa17.41■□□□□ 0.38
SYNGR3-204ENST00000564642 TMPRSS11BQ86T26 416 aa17.41■□□□□ 0.38
SYNGR3-204ENST00000564642 TBC1D1Q86TI0 1168 aaPredicted RBP17.41■□□□□ 0.38
SYNGR3-204ENST00000564642 HPS6Q86YV9 775 aa17.41■□□□□ 0.38
SYNGR3-204ENST00000564642 KCT2Q8NC54 265 aa17.41■□□□□ 0.38
SYNGR3-204ENST00000564642 ZCCHC10Q8TBK6 192 aa17.41■□□□□ 0.38
SYNGR3-204ENST00000564642 UBXN10Q96LJ8 280 aa17.41■□□□□ 0.38
SYNGR3-204ENST00000564642 CYTH2Q99418 400 aa17.41■□□□□ 0.38
SYNGR3-204ENST00000564642 SMAD5Q99717 465 aaKnown RBP17.41■□□□□ 0.38
SYNGR3-204ENST00000564642 AIF1LQ9BQI0 150 aa17.41■□□□□ 0.38
SYNGR3-204ENST00000564642 TGIF2Q9GZN2 237 aa17.41■□□□□ 0.38
SYNGR3-204ENST00000564642 EPN3Q9H201 632 aa17.41■□□□□ 0.38
SYNGR3-204ENST00000564642 CNOT10Q9H9A5 744 aaKnown RBP17.41■□□□□ 0.38
SYNGR3-204ENST00000564642 PELI2Q9HAT8 420 aa17.41■□□□□ 0.38
SYNGR3-204ENST00000564642 RNF112Q9ULX5 631 aa17.41■□□□□ 0.38
SYNGR3-204ENST00000564642 MASP2O00187 686 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 MAP2K7O14733 419 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 NDUFS4O43181 175 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 DPM1O60762 260 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 H2AFYO75367 372 aaKnown RBP17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 S100BP04271 92 aaPredicted RBP17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 ALPPP05187 535 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 IL1RNP18510 177 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 CXCR2P25025 360 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 ITGA3P26006 1051 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 GDF5P43026 501 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 PWP1Q13610 501 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 MYBPC3Q14896 1274 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 RBBP5Q15291 538 aaKnown RBP17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 C18orf21Q32NC0 220 aaPredicted RBP17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 CDKL4Q5MAI5 379 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 MROH9Q5TGP6 573 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 VWA5B1Q5TIE3 1220 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 IRAK1BP1Q5VVH5 260 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 SULT1C3Q6IMI6 304 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 CMC1Q7Z7K0 106 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 RELL1Q8IUW5 271 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 ZNF740Q8NDX6 193 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 KIAA1191Q96A73 305 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 FMO2Q99518 471 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 CAPS2Q9BXY5 557 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 NMRAL1Q9HBL8 299 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 WWOXQ9NZC7 414 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 NINJ2Q9NZG7 142 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 CD274Q9NZQ7 290 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 C5AR2Q9P296 337 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 ZFP69BQ9UJL9 534 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 MYO18BQ8IUG5 2567 aa17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 TLN1Q9Y490 2541 aaKnown RBP17.4■□□□□ 0.38
SYNGR3-204ENST00000564642 IDSB3KWA1 339 aa17.39■□□□□ 0.37
SYNGR3-204ENST00000564642 ALOX12BO75342 701 aa17.39■□□□□ 0.37
SYNGR3-204ENST00000564642 IPO13O94829 963 aaKnown RBP17.39■□□□□ 0.37
SYNGR3-204ENST00000564642 LTA4HP09960 611 aaKnown RBP17.39■□□□□ 0.37
SYNGR3-204ENST00000564642 SLC35E2BP0CK96 405 aa17.39■□□□□ 0.37
SYNGR3-204ENST00000564642 ACPPP15309 386 aa17.39■□□□□ 0.37
SYNGR3-204ENST00000564642 GNAZP19086 355 aa17.39■□□□□ 0.37
SYNGR3-204ENST00000564642 AHRP35869 848 aa17.39■□□□□ 0.37
SYNGR3-204ENST00000564642 SOX8P57073 446 aa17.39■□□□□ 0.37
SYNGR3-204ENST00000564642 MAT1AQ00266 395 aaKnown RBP17.39■□□□□ 0.37
SYNGR3-204ENST00000564642 RGS1Q08116 209 aa17.39■□□□□ 0.37
SYNGR3-204ENST00000564642 OR4D1Q15615 310 aa17.39■□□□□ 0.37
SYNGR3-204ENST00000564642 FAAH2Q6GMR7 532 aa17.39■□□□□ 0.37
SYNGR3-204ENST00000564642 PRSS41Q7RTY9 318 aa17.39■□□□□ 0.37
SYNGR3-204ENST00000564642 KLHDC8AQ8IYD2 350 aa17.39■□□□□ 0.37
SYNGR3-204ENST00000564642 OR11G2Q8NGC1 345 aa17.39■□□□□ 0.37
SYNGR3-204ENST00000564642 STAG3L4Q8TBR4 150 aa17.39■□□□□ 0.37
SYNGR3-204ENST00000564642 MKL2Q9ULH7 1088 aa17.39■□□□□ 0.37
SYNGR3-204ENST00000564642 ACOT9Q9Y305 439 aa17.39■□□□□ 0.37
SYNGR3-204ENST00000564642 SLC22A7Q9Y694 548 aa17.39■□□□□ 0.37
SYNGR3-204ENST00000564642 BOD1L1Q8NFC6 3051 aa17.39■□□□□ 0.37
SYNGR3-204ENST00000564642 URADA6NGE7 173 aa17.38■□□□□ 0.37
SYNGR3-204ENST00000564642 SGK494L7N484 410 aa17.38■□□□□ 0.37
SYNGR3-204ENST00000564642 WISP1O95388 367 aa17.38■□□□□ 0.37
SYNGR3-204ENST00000564642 BMP10O95393 424 aa17.38■□□□□ 0.37
SYNGR3-204ENST00000564642 HPP00738 406 aa17.38■□□□□ 0.37
SYNGR3-204ENST00000564642 C1GALT1C1LP0DN25 315 aa17.38■□□□□ 0.37
SYNGR3-204ENST00000564642 SCTRP47872 440 aa17.38■□□□□ 0.37
SYNGR3-204ENST00000564642 SLC6A12P48065 614 aa17.38■□□□□ 0.37
SYNGR3-204ENST00000564642 SNRPNP63162 240 aaKnown RBP17.38■□□□□ 0.37
SYNGR3-204ENST00000564642 REEP5Q00765 189 aa17.38■□□□□ 0.37
SYNGR3-204ENST00000564642 HERC3Q15034 1050 aa17.38■□□□□ 0.37
SYNGR3-204ENST00000564642 NADK2Q4G0N4 442 aa17.38■□□□□ 0.37
SYNGR3-204ENST00000564642 MFSD4BQ5TF39 518 aa17.38■□□□□ 0.37
SYNGR3-204ENST00000564642 ATG9BQ674R7 924 aa17.38■□□□□ 0.37
SYNGR3-204ENST00000564642 CCDC91Q7Z6B0 441 aa17.38■□□□□ 0.37
SYNGR3-204ENST00000564642 PARP9Q8IXQ6 854 aa17.38■□□□□ 0.37
SYNGR3-204ENST00000564642 TRPV3Q8NET8 790 aa17.38■□□□□ 0.37
SYNGR3-204ENST00000564642 OR51Q1Q8NH59 317 aa17.38■□□□□ 0.37
SYNGR3-204ENST00000564642 EXT2Q93063 718 aa17.38■□□□□ 0.37
SYNGR3-204ENST00000564642 C8orf44Q96CB5 159 aa17.38■□□□□ 0.37
SYNGR3-204ENST00000564642 MOCOSQ96EN8 888 aa17.38■□□□□ 0.37
SYNGR3-204ENST00000564642 SPNS1Q9H2V7 528 aa17.38■□□□□ 0.37
SYNGR3-204ENST00000564642 CDC42EP4Q9H3Q1 356 aaKnown RBP17.38■□□□□ 0.37
SYNGR3-204ENST00000564642 ACSS3Q9H6R3 686 aa17.38■□□□□ 0.37
SYNGR3-204ENST00000564642 ZNF552Q9H707 407 aaPredicted RBP17.38■□□□□ 0.37
SYNGR3-204ENST00000564642 GPRC5BQ9NZH0 403 aa17.38■□□□□ 0.37
SYNGR3-204ENST00000564642 NAALAD2Q9Y3Q0 740 aa17.38■□□□□ 0.37
SYNGR3-204ENST00000564642 SPTA1P02549 2419 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms