RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 MTCP1P56278 107 aa3.8□□□□□ -1.8
UBR1-205ENST00000564540 CACNG1Q06432 222 aa3.8□□□□□ -1.8
UBR1-205ENST00000564540 RALBP1Q15311 655 aa3.8□□□□□ -1.8
UBR1-205ENST00000564540 HIGD2BQ4VC39 106 aa3.8□□□□□ -1.8
UBR1-205ENST00000564540 ATP1A1-AS1Q5TC04 95 aa3.8□□□□□ -1.8
UBR1-205ENST00000564540 CST9LP1Q5W188 147 aa3.8□□□□□ -1.8
UBR1-205ENST00000564540 TIPARPQ7Z3E1 657 aaKnown RBP3.8□□□□□ -1.8
UBR1-205ENST00000564540 OR6J1Q8NGC5 347 aa3.8□□□□□ -1.8
UBR1-205ENST00000564540 TOMM40LQ969M1 308 aa3.8□□□□□ -1.8
UBR1-205ENST00000564540 NXPE2Q96DL1 559 aa3.8□□□□□ -1.8
UBR1-205ENST00000564540 PGM2Q96G03 612 aa3.8□□□□□ -1.8
UBR1-205ENST00000564540 CFAP57Q96MR6 1250 aa3.8□□□□□ -1.8
UBR1-205ENST00000564540 CENPOQ9BU64 300 aa3.8□□□□□ -1.8
UBR1-205ENST00000564540 ANKRD2Q9GZV1 360 aa3.8□□□□□ -1.8
UBR1-205ENST00000564540 PHPT1Q9NRX4 125 aaPredicted RBP3.8□□□□□ -1.8
UBR1-205ENST00000564540 POLLQ9UGP5 575 aa3.8□□□□□ -1.8
UBR1-205ENST00000564540 PILRBQ9UKJ0 227 aa3.8□□□□□ -1.8
UBR1-205ENST00000564540 NEDD4P46934 1319 aa3.79□□□□□ -1.8
UBR1-205ENST00000564540 IGLV4-3A0A075B6K6 122 aa3.79□□□□□ -1.8
UBR1-205ENST00000564540 A0A087WZ39 114 aa3.79□□□□□ -1.8
UBR1-205ENST00000564540 IGHV3-20A0A0C4DH32 117 aa3.79□□□□□ -1.8
UBR1-205ENST00000564540 UBE2CO00762 179 aa3.79□□□□□ -1.8
UBR1-205ENST00000564540 STAG3L1P0CL83 205 aa3.79□□□□□ -1.8
UBR1-205ENST00000564540 CD59P13987 128 aa3.79□□□□□ -1.8
UBR1-205ENST00000564540 MZT1Q08AG7 82 aa3.79□□□□□ -1.8
UBR1-205ENST00000564540 C16orf54Q6UWD8 224 aa3.79□□□□□ -1.8
UBR1-205ENST00000564540 ANKRD33Q7Z3H0 272 aa3.79□□□□□ -1.8
UBR1-205ENST00000564540 PIGWQ7Z7B1 504 aa3.79□□□□□ -1.8
UBR1-205ENST00000564540 CCDC60Q8IWA6 550 aaPredicted RBP3.79□□□□□ -1.8
UBR1-205ENST00000564540 CCDC63Q8NA47 563 aa3.79□□□□□ -1.8
UBR1-205ENST00000564540 EXT2Q93063 718 aa3.79□□□□□ -1.8
UBR1-205ENST00000564540 RNF121Q9H920 327 aa3.79□□□□□ -1.8
UBR1-205ENST00000564540 ANKEF1Q9NU02 776 aa3.79□□□□□ -1.8
UBR1-205ENST00000564540 PKD2L2Q9NZM6 624 aa3.79□□□□□ -1.8
UBR1-205ENST00000564540 C5AR2Q9P296 337 aa3.79□□□□□ -1.8
UBR1-205ENST00000564540 IL36AQ9UHA7 158 aa3.79□□□□□ -1.8
UBR1-205ENST00000564540 POMT2Q9UKY4 750 aa3.79□□□□□ -1.8
UBR1-205ENST00000564540 HEG1Q9ULI3 1381 aa3.78□□□□□ -1.8
UBR1-205ENST00000564540 IL16Q14005 1332 aa3.78□□□□□ -1.8
UBR1-205ENST00000564540 IGLV3-10A0A075B6K4 115 aa3.78□□□□□ -1.8
UBR1-205ENST00000564540 P4HA2O15460 535 aa3.78□□□□□ -1.8
UBR1-205ENST00000564540 MAGEB2O15479 319 aa3.78□□□□□ -1.8
UBR1-205ENST00000564540 FYNP06241 537 aa3.78□□□□□ -1.8
UBR1-205ENST00000564540 MYL6BP14649 208 aa3.78□□□□□ -1.8
UBR1-205ENST00000564540 HSPA4P34932 840 aa3.78□□□□□ -1.8
UBR1-205ENST00000564540 RAD52P43351 418 aa3.78□□□□□ -1.8
UBR1-205ENST00000564540 ZFP36L2P47974 494 aaKnown RBP3.78□□□□□ -1.8
UBR1-205ENST00000564540 CALD1Q05682 793 aaKnown RBP3.78□□□□□ -1.8
UBR1-205ENST00000564540 ZNF146Q15072 292 aa3.78□□□□□ -1.8
UBR1-205ENST00000564540 RBBP7Q16576 425 aa3.78□□□□□ -1.8
UBR1-205ENST00000564540 C15orf32Q32M92 178 aa3.78□□□□□ -1.8
UBR1-205ENST00000564540 FAM106AQ4KMX7 169 aa3.78□□□□□ -1.8
UBR1-205ENST00000564540 FGD3Q5JSP0 725 aa3.78□□□□□ -1.8
UBR1-205ENST00000564540 MFSD4BQ5TF39 518 aa3.78□□□□□ -1.8
UBR1-205ENST00000564540 SEL1L3Q68CR1 1132 aa3.78□□□□□ -1.8
UBR1-205ENST00000564540 FAM219AQ8IW50 185 aa3.78□□□□□ -1.8
UBR1-205ENST00000564540 OR4N5Q8IXE1 308 aa3.78□□□□□ -1.8
UBR1-205ENST00000564540 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.78□□□□□ -1.8
UBR1-205ENST00000564540 RPLP0P6Q8NHW5 317 aa3.78□□□□□ -1.8
UBR1-205ENST00000564540 ZPLD1Q8TCW7 415 aa3.78□□□□□ -1.8
UBR1-205ENST00000564540 CHURC1Q8WUH1 139 aa3.78□□□□□ -1.8
UBR1-205ENST00000564540 SEPT1Q8WYJ6 367 aa3.78□□□□□ -1.8
UBR1-205ENST00000564540 MRPS27Q92552 414 aaKnown RBP3.78□□□□□ -1.8
UBR1-205ENST00000564540 RBM41Q96IZ5 413 aaKnown RBP3.78□□□□□ -1.8
UBR1-205ENST00000564540 GTPBP2Q9BX10 602 aaKnown RBP3.78□□□□□ -1.8
UBR1-205ENST00000564540 ADNPQ9H2P0 1102 aa3.78□□□□□ -1.8
UBR1-205ENST00000564540 SNX25Q9H3E2 840 aa3.78□□□□□ -1.8
UBR1-205ENST00000564540 FN3KQ9H479 309 aa3.78□□□□□ -1.8
UBR1-205ENST00000564540 GTSE1Q9NYZ3 720 aa3.78□□□□□ -1.8
UBR1-205ENST00000564540 KAT6BQ8WYB5 2073 aa3.78□□□□□ -1.8
UBR1-205ENST00000564540 NPHP3Q7Z494 1330 aa3.77□□□□□ -1.81
UBR1-205ENST00000564540 H3BMM5 538 aa3.77□□□□□ -1.81
UBR1-205ENST00000564540 PHF1O43189 567 aaPredicted RBP3.77□□□□□ -1.81
UBR1-205ENST00000564540 GALR3O60755 368 aaPredicted RBP3.77□□□□□ -1.81
UBR1-205ENST00000564540 GGPS1O95749 300 aa3.77□□□□□ -1.81
UBR1-205ENST00000564540 MELTFP08582 738 aa3.77□□□□□ -1.81
UBR1-205ENST00000564540 PCP11498 1178 aaKnown RBP3.77□□□□□ -1.81
UBR1-205ENST00000564540 GP9P14770 177 aa3.77□□□□□ -1.81
UBR1-205ENST00000564540 TCF4P15884 667 aa3.77□□□□□ -1.81
UBR1-205ENST00000564540 ACAT1P24752 427 aaKnown RBP3.77□□□□□ -1.81
UBR1-205ENST00000564540 EDNRAP25101 427 aa3.77□□□□□ -1.81
UBR1-205ENST00000564540 ATP4BP51164 291 aa3.77□□□□□ -1.81
UBR1-205ENST00000564540 NDST2P52849 883 aa3.77□□□□□ -1.81
UBR1-205ENST00000564540 FKBP3Q00688 224 aaKnown RBP3.77□□□□□ -1.81
UBR1-205ENST00000564540 TOMM20Q15388 145 aa3.77□□□□□ -1.81
UBR1-205ENST00000564540 KYNUQ16719 465 aa3.77□□□□□ -1.81
UBR1-205ENST00000564540 TTC27Q6P3X3 843 aa3.77□□□□□ -1.81
UBR1-205ENST00000564540 TMED8Q6PL24 325 aaPredicted RBP3.77□□□□□ -1.81
UBR1-205ENST00000564540 ENPP7Q6UWV6 458 aa3.77□□□□□ -1.81
UBR1-205ENST00000564540 C5orf24Q7Z6I8 188 aa3.77□□□□□ -1.81
UBR1-205ENST00000564540 ZNF584Q8IVC4 421 aa3.77□□□□□ -1.81
UBR1-205ENST00000564540 SLC22A15Q8IZD6 547 aa3.77□□□□□ -1.81
UBR1-205ENST00000564540 CAMKVQ8NCB2 501 aa3.77□□□□□ -1.81
UBR1-205ENST00000564540 SSC4DQ8WTU2 575 aa3.77□□□□□ -1.81
UBR1-205ENST00000564540 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.77□□□□□ -1.81
UBR1-205ENST00000564540 KATNB1Q9BVA0 655 aa3.77□□□□□ -1.81
UBR1-205ENST00000564540 FAM129AQ9BZQ8 928 aa3.77□□□□□ -1.81
UBR1-205ENST00000564540 ST6GALNAC4Q9H4F1 302 aa3.77□□□□□ -1.81
UBR1-205ENST00000564540 FBXL4Q9UKA2 621 aa3.77□□□□□ -1.81
UBR1-205ENST00000564540 A8MVM7 634 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms