RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 MFSD4BQ5TF39 518 aa23.94■■□□□ 1.42
AC009041.3-201ENST00000564390 ZDHHC24Q6UX98 284 aa23.94■■□□□ 1.42
AC009041.3-201ENST00000564390 FRA10AC1Q70Z53 315 aa23.94■■□□□ 1.42
AC009041.3-201ENST00000564390 THOC6Q86W42 341 aaKnown RBP23.94■■□□□ 1.42
AC009041.3-201ENST00000564390 AMER2Q8N7J2 671 aa23.94■■□□□ 1.42
AC009041.3-201ENST00000564390 OR4K1Q8NGD4 311 aa23.94■■□□□ 1.42
AC009041.3-201ENST00000564390 CDKL2Q92772 493 aa23.94■■□□□ 1.42
AC009041.3-201ENST00000564390 C19orf60Q96EN9 201 aa23.94■■□□□ 1.42
AC009041.3-201ENST00000564390 C16orf45Q96MC5 204 aaPredicted RBP23.94■■□□□ 1.42
AC009041.3-201ENST00000564390 POPDC3Q9HBV1 291 aa23.94■■□□□ 1.42
AC009041.3-201ENST00000564390 ANKHQ9HCJ1 492 aa23.94■■□□□ 1.42
AC009041.3-201ENST00000564390 TXNDC16Q9P2K2 825 aa23.94■■□□□ 1.42
AC009041.3-201ENST00000564390 OARD1Q9Y530 152 aa23.94■■□□□ 1.42
AC009041.3-201ENST00000564390 IGHV1-45A0A0A0MS14 117 aa23.93■■□□□ 1.42
AC009041.3-201ENST00000564390 TRBC2A0A5B9 178 aa23.93■■□□□ 1.42
AC009041.3-201ENST00000564390 FAM159BA6NKW6 160 aa23.93■■□□□ 1.42
AC009041.3-201ENST00000564390 SERPIND1P05546 499 aa23.93■■□□□ 1.42
AC009041.3-201ENST00000564390 CELA2AP08217 269 aa23.93■■□□□ 1.42
AC009041.3-201ENST00000564390 POU4F1Q01851 419 aa23.93■■□□□ 1.42
AC009041.3-201ENST00000564390 SRSF1Q07955 248 aaKnown RBP eCLIP23.93■■□□□ 1.42
AC009041.3-201ENST00000564390 CSHL1Q14406 222 aa23.93■■□□□ 1.42
AC009041.3-201ENST00000564390 USP10Q14694 798 aaKnown RBP23.93■■□□□ 1.42
AC009041.3-201ENST00000564390 C3orf62Q6ZUJ4 267 aa23.93■■□□□ 1.42
AC009041.3-201ENST00000564390 NDUFAF7Q7L592 441 aa23.93■■□□□ 1.42
AC009041.3-201ENST00000564390 ZNF572Q7Z3I7 529 aaPredicted RBP23.93■■□□□ 1.42
AC009041.3-201ENST00000564390 TMPRSS11BQ86T26 416 aa23.93■■□□□ 1.42
AC009041.3-201ENST00000564390 ADAMTSL2Q86TH1 951 aa23.93■■□□□ 1.42
AC009041.3-201ENST00000564390 IQCKQ8N0W5 287 aa23.93■■□□□ 1.42
AC009041.3-201ENST00000564390 GALNT11Q8NCW6 608 aa23.93■■□□□ 1.42
AC009041.3-201ENST00000564390 RBBP8Q99708 897 aa23.93■■□□□ 1.42
AC009041.3-201ENST00000564390 RBCK1Q9BYM8 510 aa23.93■■□□□ 1.42
AC009041.3-201ENST00000564390 VN1R1Q9GZP7 353 aa23.93■■□□□ 1.42
AC009041.3-201ENST00000564390 SLC22A14Q9Y267 594 aa23.93■■□□□ 1.42
AC009041.3-201ENST00000564390 NAALAD2Q9Y3Q0 740 aa23.93■■□□□ 1.42
AC009041.3-201ENST00000564390 DYRK1BQ9Y463 629 aa23.93■■□□□ 1.42
AC009041.3-201ENST00000564390 SHANK1Q9Y566 2161 aa23.93■■□□□ 1.42
AC009041.3-201ENST00000564390 ESYT3A0FGR9 886 aa23.92■■□□□ 1.42
AC009041.3-201ENST00000564390 CTAGE15A4D2H0 777 aa23.92■■□□□ 1.42
AC009041.3-201ENST00000564390 OR2W5A6NFC9 320 aa23.92■■□□□ 1.42
AC009041.3-201ENST00000564390 NCF1BA6NI72 391 aaPredicted RBP23.92■■□□□ 1.42
AC009041.3-201ENST00000564390 NCF1CA8MVU1 366 aaPredicted RBP23.92■■□□□ 1.42
AC009041.3-201ENST00000564390 KLHL18O94889 574 aa23.92■■□□□ 1.42
AC009041.3-201ENST00000564390 WISP3O95389 354 aaPredicted RBP23.92■■□□□ 1.42
AC009041.3-201ENST00000564390 C1QAP02745 245 aa23.92■■□□□ 1.42
AC009041.3-201ENST00000564390 NCF1P14598 390 aaPredicted RBP23.92■■□□□ 1.42
AC009041.3-201ENST00000564390 XCR1P46094 333 aa23.92■■□□□ 1.42
AC009041.3-201ENST00000564390 SLC7A5Q01650 507 aa23.92■■□□□ 1.42
AC009041.3-201ENST00000564390 MINDY4Q4G0A6 757 aa23.92■■□□□ 1.42
AC009041.3-201ENST00000564390 LINC00696Q6ZRV3 163 aa23.92■■□□□ 1.42
AC009041.3-201ENST00000564390 CTAGE6Q86UF2 777 aa23.92■■□□□ 1.42
AC009041.3-201ENST00000564390 CUZD1Q86UP6 607 aa23.92■■□□□ 1.42
AC009041.3-201ENST00000564390 CTAGE3PQ8IX95 158 aa23.92■■□□□ 1.42
AC009041.3-201ENST00000564390 KBTBD2Q8IY47 623 aa23.92■■□□□ 1.42
AC009041.3-201ENST00000564390 CISD2Q8N5K1 135 aaKnown RBP23.92■■□□□ 1.42
AC009041.3-201ENST00000564390 OR51Q1Q8NH59 317 aa23.92■■□□□ 1.42
AC009041.3-201ENST00000564390 ANKRD7Q92527 254 aa23.92■■□□□ 1.42
AC009041.3-201ENST00000564390 SNRNP40Q96DI7 357 aaKnown RBP23.92■■□□□ 1.42
AC009041.3-201ENST00000564390 GPR22Q99680 433 aa23.92■■□□□ 1.42
AC009041.3-201ENST00000564390 CPNE1Q99829 537 aa23.92■■□□□ 1.42
AC009041.3-201ENST00000564390 WDR77Q9BQA1 342 aaPredicted RBP23.92■■□□□ 1.42
AC009041.3-201ENST00000564390 SCN3AQ9NY46 2000 aa23.92■■□□□ 1.42
AC009041.3-201ENST00000564390 FAM155BO75949 473 aa23.91■■□□□ 1.42
AC009041.3-201ENST00000564390 B3GALT4O96024 378 aa23.91■■□□□ 1.42
AC009041.3-201ENST00000564390 GMPRP36959 345 aa23.91■■□□□ 1.42
AC009041.3-201ENST00000564390 GP5P40197 560 aa23.91■■□□□ 1.42
AC009041.3-201ENST00000564390 CDKL1Q00532 357 aa23.91■■□□□ 1.42
AC009041.3-201ENST00000564390 REEP5Q00765 189 aa23.91■■□□□ 1.42
AC009041.3-201ENST00000564390 UBAP2LQ14157 1087 aaKnown RBP23.91■■□□□ 1.42
AC009041.3-201ENST00000564390 PCOLCEQ15113 449 aa23.91■■□□□ 1.42
AC009041.3-201ENST00000564390 Q6ZS92 163 aa23.91■■□□□ 1.42
AC009041.3-201ENST00000564390 LANCL3Q6ZV70 420 aa23.91■■□□□ 1.42
AC009041.3-201ENST00000564390 OR5T3Q8NGG3 340 aa23.91■■□□□ 1.42
AC009041.3-201ENST00000564390 CNDP1Q96KN2 507 aa23.91■■□□□ 1.42
AC009041.3-201ENST00000564390 SARGQ9BW04 601 aa23.91■■□□□ 1.42
AC009041.3-201ENST00000564390 FAM129AQ9BZQ8 928 aa23.91■■□□□ 1.42
AC009041.3-201ENST00000564390 DERL2Q9GZP9 239 aa23.91■■□□□ 1.42
AC009041.3-201ENST00000564390 LOC102723996A0A087X1L8 192 aa23.9■■□□□ 1.42
AC009041.3-201ENST00000564390 A0A1W2PQ72 361 aa23.9■■□□□ 1.42
AC009041.3-201ENST00000564390 CLEC18AA5D8T8 446 aa23.9■■□□□ 1.42
AC009041.3-201ENST00000564390 WDR47O94967 919 aa23.9■■□□□ 1.42
AC009041.3-201ENST00000564390 PRR35P0CG20 571 aa23.9■■□□□ 1.42
AC009041.3-201ENST00000564390 CCDC166P0CW27 439 aa23.9■■□□□ 1.42
AC009041.3-201ENST00000564390 C8orf89P0DMQ9 161 aa23.9■■□□□ 1.42
AC009041.3-201ENST00000564390 GDF5P43026 501 aa23.9■■□□□ 1.42
AC009041.3-201ENST00000564390 MAGEA4P43358 317 aa23.9■■□□□ 1.42
AC009041.3-201ENST00000564390 CAV1Q03135 178 aa23.9■■□□□ 1.42
AC009041.3-201ENST00000564390 CKAP4Q07065 602 aaKnown RBP23.9■■□□□ 1.42
AC009041.3-201ENST00000564390 EFTUD2Q15029 972 aaKnown RBP eCLIP23.9■■□□□ 1.42
AC009041.3-201ENST00000564390 KBTBD12Q3ZCT8 623 aa23.9■■□□□ 1.42
AC009041.3-201ENST00000564390 TMEM205Q6UW68 189 aa23.9■■□□□ 1.42
AC009041.3-201ENST00000564390 IGFL2Q6UWQ7 119 aa23.9■■□□□ 1.42
AC009041.3-201ENST00000564390 CLEC18BQ6UXF7 455 aa23.9■■□□□ 1.42
AC009041.3-201ENST00000564390 TBC1D19Q8N5T2 526 aa23.9■■□□□ 1.42
AC009041.3-201ENST00000564390 PPM1NQ8N819 430 aa23.9■■□□□ 1.42
AC009041.3-201ENST00000564390 CLEC18CQ8NCF0 446 aa23.9■■□□□ 1.42
AC009041.3-201ENST00000564390 BRIX1Q8TDN6 353 aaKnown RBP23.9■■□□□ 1.42
AC009041.3-201ENST00000564390 PPP4R1Q8TF05 950 aa23.9■■□□□ 1.42
AC009041.3-201ENST00000564390 TSPAN17Q96FV3 270 aa23.9■■□□□ 1.42
AC009041.3-201ENST00000564390 PHACTR1Q9C0D0 580 aa23.9■■□□□ 1.42
AC009041.3-201ENST00000564390 EPS8L2Q9H6S3 715 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms