RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 MRPL38Q96DV4 380 aaKnown RBP9.43□□□□□ -0.9
SMG1-205ENST00000561947 RDH12Q96NR8 316 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 BHLHE41Q9C0J9 482 aaPredicted RBP9.43□□□□□ -0.9
SMG1-205ENST00000561947 RBM38Q9H0Z9 239 aaKnown RBP9.43□□□□□ -0.9
SMG1-205ENST00000561947 REEP4Q9H6H4 257 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 SOX17Q9H6I2 414 aaPredicted RBP9.43□□□□□ -0.9
SMG1-205ENST00000561947 TPT1P8Q9HAU6 139 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 MBNL1Q9NR56 388 aaKnown RBP9.43□□□□□ -0.9
SMG1-205ENST00000561947 TM7SF3Q9NS93 570 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 TDRKHQ9Y2W6 561 aaKnown RBP9.43□□□□□ -0.9
SMG1-205ENST00000561947 MAGED1Q9Y5V3 778 aaPredicted RBP9.43□□□□□ -0.9
SMG1-205ENST00000561947 GMEB1Q9Y692 573 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 C1orf226A1L170 272 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 TRIM64A6NGJ6 449 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 ENO4A6NNW6 628 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 GPR89AB7ZAQ6 455 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 RNASET2O00584 256 aaKnown RBP9.43□□□□□ -0.9
SMG1-205ENST00000561947 VILLO15195 856 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 KMOO15229 486 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 GPR89BP0CG08 455 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 LAMP2P13473 410 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 PPIBP23284 216 aaKnown RBP9.43□□□□□ -0.9
SMG1-205ENST00000561947 MAGEA2P43356 314 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 SOX9P48436 509 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 ALDH3B2P48448 385 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 IST1P53990 364 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 MYBPC3Q14896 1274 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 ARHGAP19Q14CB8 494 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 LRRC23Q53EV4 343 aaPredicted RBP9.43□□□□□ -0.9
SMG1-205ENST00000561947 ZNF385BQ569K4 471 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 ATAT1Q5SQI0 421 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 BORAQ6PGQ7 559 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 KRT78Q8N1N4 520 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 METTL4Q8N3J2 472 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 C2orf73Q8N5S3 287 aaPredicted RBP9.43□□□□□ -0.9
SMG1-205ENST00000561947 RPP25Q9BUL9 199 aaKnown RBP9.43□□□□□ -0.9
SMG1-205ENST00000561947 TRMT61BQ9BVS5 477 aaKnown RBP9.43□□□□□ -0.9
SMG1-205ENST00000561947 SPATA9Q9BWV2 254 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 OR51B5Q9H339 312 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 WDR26Q9H7D7 661 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 TUBA8Q9NY65 449 aaPredicted RBP9.43□□□□□ -0.9
SMG1-205ENST00000561947 USE1Q9NZ43 259 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 SH3BP4Q9P0V3 963 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 MSRAQ9UJ68 235 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 VPS4AQ9UN37 437 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 CORO2BQ9UQ03 480 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 COMMD3-BMI1R4GMX3 469 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 TICRRQ7Z2Z1 1910 aa9.43□□□□□ -0.9
SMG1-205ENST00000561947 TRIM64CA6NLI5 447 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 SAP18O00422 153 aaKnown RBP9.42□□□□□ -0.9
SMG1-205ENST00000561947 SEC24DO94855 1032 aaPredicted RBP9.42□□□□□ -0.9
SMG1-205ENST00000561947 BMP10O95393 424 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 RPL10P27635 214 aaKnown RBP9.42□□□□□ -0.9
SMG1-205ENST00000561947 HSD17B2P37059 387 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 FGL2Q14314 439 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 RBBP5Q15291 538 aaKnown RBP9.42□□□□□ -0.9
SMG1-205ENST00000561947 CYP2A13Q16696 494 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 ZIK1Q3SY52 487 aaPredicted RBP9.42□□□□□ -0.9
SMG1-205ENST00000561947 ZNF776Q68DI1 518 aaPredicted RBP9.42□□□□□ -0.9
SMG1-205ENST00000561947 TMIGD1Q6UXZ0 262 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 VN1R5Q7Z5H4 357 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 FAM129CQ86XR2 697 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 SYNPOQ8N3V7 929 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 TP53I13Q8NBR0 393 aaPredicted RBP9.42□□□□□ -0.9
SMG1-205ENST00000561947 ZNF740Q8NDX6 193 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 OR5K1Q8NHB7 308 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 PNPT1Q8TCS8 783 aaKnown RBP9.42□□□□□ -0.9
SMG1-205ENST00000561947 ZFP90Q8TF47 636 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 C16orf78Q8WTQ4 265 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 OSBPL10Q9BXB5 764 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 CHST8Q9H2A9 424 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 PELI2Q9HAT8 420 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 MYNNQ9NPC7 610 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 ZNF282Q9UDV7 671 aaPredicted RBP9.42□□□□□ -0.9
SMG1-205ENST00000561947 ZFR2Q9UPR6 939 aaKnown RBP9.42□□□□□ -0.9
SMG1-205ENST00000561947 DMTF1Q9Y222 760 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 A0A087WXM4 84 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 KLHL33A6NCF5 533 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 K7EQS6 105 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 KLHL18O94889 574 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 ZNF682O95780 498 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 FURINP09958 794 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 ETS2P15036 469 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 TIE1P35590 1138 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 TRIM23P36406 574 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 RPL3P39023 403 aaKnown RBP9.42□□□□□ -0.9
SMG1-205ENST00000561947 DCTP40126 519 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 TNFRSF4P43489 277 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 KIR2DL1P43626 348 aaPredicted RBP9.42□□□□□ -0.9
SMG1-205ENST00000561947 GALK1P51570 392 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 CDH15P55291 814 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 SEC13P55735 322 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 PPP2R2BQ00005 443 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 GAB1Q13480 694 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 PDE7AQ13946 482 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 RAB30Q15771 203 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.42□□□□□ -0.9
SMG1-205ENST00000561947 R3HCC1LQ7Z5L2 792 aaKnown RBP9.42□□□□□ -0.9
SMG1-205ENST00000561947 ZDHHC21Q8IVQ6 265 aa9.42□□□□□ -0.9
SMG1-205ENST00000561947 GALNT15Q8N3T1 639 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms