RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.87□□□□□ -0.833e-6■■■■■ 29
USP3-219ENST00000561326 ARHGAP24Q8N264 748 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 LIX1Q8N485 282 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 C1orf52Q8N6N3 182 aaKnown RBP9.87□□□□□ -0.83
USP3-219ENST00000561326 ZNF655Q8N720 491 aaPredicted RBP9.87□□□□□ -0.83
USP3-219ENST00000561326 POU5F2Q8N7G0 328 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 OR4C6Q8NH72 309 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 FLVCR1-AS1Q8TAF5 88 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 SAP25Q8TEE9 199 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 STARD8Q92502 1023 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 RERGQ96A58 199 aaPredicted RBP9.87□□□□□ -0.83
USP3-219ENST00000561326 ZDHHC12Q96GR4 267 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 APIPQ96GX9 242 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 APOLD1Q96LR9 279 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 RAB3IPQ96QF0 476 aaPredicted RBP9.87□□□□□ -0.83
USP3-219ENST00000561326 PRPF18Q99633 342 aaKnown RBP9.87□□□□□ -0.83
USP3-219ENST00000561326 RAB33BQ9H082 229 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 C1orf21Q9H246 121 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 SPNS1Q9H2V7 528 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 OR51B5Q9H339 312 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 SEMA6CQ9H3T2 930 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 C1GALT1Q9NS00 363 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 SIRT5Q9NXA8 310 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 POMT2Q9UKY4 750 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 PADI4Q9UM07 663 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 WBP11Q9Y2W2 641 aaKnown RBP9.87□□□□□ -0.83
USP3-219ENST00000561326 NDUFAF1Q9Y375 327 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 POLR3HQ9Y535 204 aaPredicted RBP9.87□□□□□ -0.83
USP3-219ENST00000561326 PCDHGA4Q9Y5G9 962 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 KLK4Q9Y5K2 254 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 SCN2AQ99250 2005 aa9.87□□□□□ -0.83
USP3-219ENST00000561326 GNG14A0A1W2PPG7 69 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 ARHGAP10A1A4S6 786 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 OR2A25A4D2G3 310 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 URADA6NGE7 173 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 CCDC154A6NI56 674 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 AIM2O14862 343 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 HAT1O14929 419 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 ANGPT2O15123 496 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 CFLARO15519 480 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 NRP2O60462 931 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 EPN2O95208 641 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 IL6P05231 212 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 ANXA4P09525 319 aaPredicted RBP9.86□□□□□ -0.83
USP3-219ENST00000561326 DDX5P17844 614 aaKnown RBP9.86□□□□□ -0.83
USP3-219ENST00000561326 MAGP20916 626 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 PRPS1L1P21108 318 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 JAK1P23458 1154 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 LAMA1P25391 3075 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 MPLP40238 635 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 GSTM5P46439 218 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 CAPZBP47756 277 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 NME5P56597 212 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 NCALDP61601 193 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 STXBP1P61764 594 aaKnown RBP9.86□□□□□ -0.83
USP3-219ENST00000561326 UFM1P61960 85 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 GPLD1P80108 840 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 ACTN3Q08043 901 aaPredicted RBP9.86□□□□□ -0.83
USP3-219ENST00000561326 RGS1Q08116 209 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 TBL3Q12788 808 aaKnown RBP9.86□□□□□ -0.83
USP3-219ENST00000561326 PWP1Q13610 501 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 NR0B2Q15466 257 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 LPAL2Q16609 132 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 DNAL1Q4LDG9 190 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 ZC3H12BQ5HYM0 836 aaKnown RBP9.86□□□□□ -0.83
USP3-219ENST00000561326 MANEAQ5SRI9 462 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 LAIR1Q6GTX8 287 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 IRGCQ6NXR0 463 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 GALNT18Q6P9A2 607 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 PAOXQ6QHF9 649 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 BLOC1S3Q6QNY0 202 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 C16orf89Q6UX73 402 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 FAM20CQ8IXL6 584 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 SLC35F3Q8IY50 421 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 METTL4Q8N3J2 472 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 RNF175Q8N4F7 328 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 ANKRD53Q8N9V6 530 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 KYQ8NBH2 561 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 CAMKVQ8NCB2 501 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 BAHD1Q8TBE0 780 aaPredicted RBP9.86□□□□□ -0.83
USP3-219ENST00000561326 PROKR1Q8TCW9 393 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 NCSTNQ92542 709 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 MCUR1Q96AQ8 359 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 CD180Q99467 661 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 PRRX2Q99811 253 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 MS4A8Q9BY19 250 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 NLNQ9BYT8 704 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 LRMDAQ9H2I8 198 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 MMADHCQ9H3L0 296 aaPredicted RBP9.86□□□□□ -0.83
USP3-219ENST00000561326 GID8Q9NWU2 228 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 EPHA6Q9UF33 1036 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 BAIAP2L1Q9UHR4 511 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 GMEB2Q9UKD1 530 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 RNF215Q9Y6U7 377 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 ZNF318Q5VUA4 2279 aa9.86□□□□□ -0.83
USP3-219ENST00000561326 SPTBP11277 2137 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 A0A1W2PP18 115 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 LRIT2A6NDA9 550 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 FAM86C2PA6NEL3 165 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 NR5A2O00482 541 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms