RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 DYRK1BQ9Y463 629 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 KCNE2Q9Y6J6 123 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 C9J4A7 227 aa13.2□□□□□ -0.3
TPM1-230ENST00000561266 CCNT2O60583 730 aaKnown RBP13.2□□□□□ -0.3
TPM1-230ENST00000561266 KRT38O76015 456 aa13.2□□□□□ -0.3
TPM1-230ENST00000561266 SIX3O95343 332 aaPredicted RBP13.2□□□□□ -0.3
TPM1-230ENST00000561266 RECKO95980 971 aa13.2□□□□□ -0.3
TPM1-230ENST00000561266 ITGB2P05107 769 aa13.2□□□□□ -0.3
TPM1-230ENST00000561266 IL1RNP18510 177 aa13.2□□□□□ -0.3
TPM1-230ENST00000561266 HSD17B3P37058 310 aa13.2□□□□□ -0.3
TPM1-230ENST00000561266 MC1RQ01726 317 aa13.2□□□□□ -0.3
TPM1-230ENST00000561266 ATP1A4Q13733 1029 aa13.2□□□□□ -0.3
TPM1-230ENST00000561266 SLBPQ14493 270 aaKnown RBP eCLIP13.2□□□□□ -0.3
TPM1-230ENST00000561266 FAM83EQ2M2I3 478 aa13.2□□□□□ -0.3
TPM1-230ENST00000561266 TAF1BQ53T94 588 aaPredicted RBP13.2□□□□□ -0.3
TPM1-230ENST00000561266 BORAQ6PGQ7 559 aa13.2□□□□□ -0.3
TPM1-230ENST00000561266 TIFABQ6ZNK6 161 aa13.2□□□□□ -0.3
TPM1-230ENST00000561266 SH2D5Q6ZV89 423 aa13.2□□□□□ -0.3
TPM1-230ENST00000561266 PPP1R32Q7Z5V6 425 aa13.2□□□□□ -0.3
TPM1-230ENST00000561266 ASPGQ86U10 573 aa13.2□□□□□ -0.3
TPM1-230ENST00000561266 PRSS58Q8IYP2 241 aa13.2□□□□□ -0.3
TPM1-230ENST00000561266 TCAIMQ8N3R3 496 aa13.2□□□□□ -0.3
TPM1-230ENST00000561266 SNX31Q8N9S9 440 aa13.2□□□□□ -0.3
TPM1-230ENST00000561266 OR2W6PQ8NHA6 318 aa13.2□□□□□ -0.3
TPM1-230ENST00000561266 AENQ8WTP8 325 aaKnown RBP13.2□□□□□ -0.3
TPM1-230ENST00000561266 UBTD2Q8WUN7 234 aa13.2□□□□□ -0.3
TPM1-230ENST00000561266 UBLCP1Q8WVY7 318 aaPredicted RBP13.2□□□□□ -0.3
TPM1-230ENST00000561266 SLC13A3Q8WWT9 602 aa13.2□□□□□ -0.3
TPM1-230ENST00000561266 SLC39A7Q92504 469 aa13.2□□□□□ -0.3
TPM1-230ENST00000561266 COL26A1Q96A83 441 aa13.2□□□□□ -0.3
TPM1-230ENST00000561266 THAP11Q96EK4 314 aa13.2□□□□□ -0.3
TPM1-230ENST00000561266 SLC26A1Q9H2B4 701 aa13.2□□□□□ -0.3
TPM1-230ENST00000561266 TBK1Q9UHD2 729 aa13.2□□□□□ -0.3
TPM1-230ENST00000561266 GPN3Q9UHW5 284 aaPredicted RBP13.2□□□□□ -0.3
TPM1-230ENST00000561266 IKBKGQ9Y6K9 419 aa13.2□□□□□ -0.3
TPM1-230ENST00000561266 COL6A6A6NMZ7 2263 aa13.19□□□□□ -0.3
TPM1-230ENST00000561266 KALRNO60229 2985 aa13.19□□□□□ -0.3
TPM1-230ENST00000561266 IGLV3-12A0A075B6K2 115 aa13.19□□□□□ -0.3
TPM1-230ENST00000561266 OR2W5A6NFC9 320 aa13.19□□□□□ -0.3
TPM1-230ENST00000561266 GOLGA8RI6L899 631 aa13.19□□□□□ -0.3
TPM1-230ENST00000561266 SGK494L7N484 410 aa13.19□□□□□ -0.3
TPM1-230ENST00000561266 TK2O00142 265 aa13.19□□□□□ -0.3
TPM1-230ENST00000561266 ALOX12BO75342 701 aa13.19□□□□□ -0.3
TPM1-230ENST00000561266 JRKO75564 520 aa13.19□□□□□ -0.3
TPM1-230ENST00000561266 CNTFP26441 200 aa13.19□□□□□ -0.3
TPM1-230ENST00000561266 OTX2P32243 289 aa13.19□□□□□ -0.3
TPM1-230ENST00000561266 DEKP35659 375 aaKnown RBP13.19□□□□□ -0.3
TPM1-230ENST00000561266 SLCO1A2P46721 670 aa13.19□□□□□ -0.3
TPM1-230ENST00000561266 POLE2P56282 527 aa13.19□□□□□ -0.3
TPM1-230ENST00000561266 DOC2AQ14183 400 aa13.19□□□□□ -0.3
TPM1-230ENST00000561266 SETDB1Q15047 1291 aa13.19□□□□□ -0.3
TPM1-230ENST00000561266 RBBP5Q15291 538 aaKnown RBP13.19□□□□□ -0.3
TPM1-230ENST00000561266 PFKFB4Q16877 469 aa13.19□□□□□ -0.3
TPM1-230ENST00000561266 GARNL3Q5VVW2 1013 aa13.19□□□□□ -0.3
TPM1-230ENST00000561266 ATG9BQ674R7 924 aa13.19□□□□□ -0.3
TPM1-230ENST00000561266 RPS27LQ71UM5 84 aaKnown RBP13.19□□□□□ -0.3
TPM1-230ENST00000561266 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.19□□□□□ -0.3
TPM1-230ENST00000561266 OR2Y1Q8NGV0 311 aa13.19□□□□□ -0.3
TPM1-230ENST00000561266 NT5CQ8TCD5 201 aa13.19□□□□□ -0.3
TPM1-230ENST00000561266 STT3BQ8TCJ2 826 aa13.19□□□□□ -0.3
TPM1-230ENST00000561266 EPS8L3Q8TE67 593 aaKnown RBP13.19□□□□□ -0.3
TPM1-230ENST00000561266 FKBP10Q96AY3 582 aa13.19□□□□□ -0.3
TPM1-230ENST00000561266 MMABQ96EY8 250 aaPredicted RBP13.19□□□□□ -0.3
TPM1-230ENST00000561266 ACSS2Q9NR19 701 aa13.19□□□□□ -0.3
TPM1-230ENST00000561266 TMEM216Q9P0N5 145 aa13.19□□□□□ -0.3
TPM1-230ENST00000561266 CPSF2Q9P2I0 782 aaKnown RBP13.19□□□□□ -0.3
TPM1-230ENST00000561266 XPR1Q9UBH6 696 aa13.19□□□□□ -0.3
TPM1-230ENST00000561266 ZFP69BQ9UJL9 534 aa13.19□□□□□ -0.3
TPM1-230ENST00000561266 POLHQ9Y253 713 aa13.19□□□□□ -0.3
TPM1-230ENST00000561266 TLN1Q9Y490 2541 aaKnown RBP13.19□□□□□ -0.3
TPM1-230ENST00000561266 ZNF860A6NHJ4 632 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 ARGFXA6NJG6 315 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 NDUFS4O43181 175 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 WFS1O76024 890 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 ALBP02768 609 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 SERPIND1P05546 499 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 ZGLP1P0C6A0 271 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 SMIM10L1P0DMW3 83 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 GNAZP19086 355 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 NR1D1P20393 614 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 FBLP22087 321 aaKnown RBP13.18□□□□□ -0.3
TPM1-230ENST00000561266 HNF4AP41235 474 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 KLC1Q07866 573 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 CHIT1Q13231 466 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 FAM53BQ14153 422 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 E2F2Q14209 437 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 SSPNQ14714 243 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 PDK4Q16654 411 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 WDR93Q6P2C0 686 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 PRMT9Q6P2P2 845 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 CCDC91Q7Z6B0 441 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 RNF175Q8N4F7 328 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 AFAP1L2Q8N4X5 818 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 CAMKVQ8NCB2 501 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 OR5T3Q8NGG3 340 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 UTP15Q8TED0 518 aaKnown RBP13.18□□□□□ -0.3
TPM1-230ENST00000561266 WDR34Q96EX3 536 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 WBP1Q96G27 269 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 SMIM10Q96HG1 83 aa13.18□□□□□ -0.3
TPM1-230ENST00000561266 NSUN5Q96P11 429 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms